EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005578 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 888 bases
Position: chrJH651567.1:261272-262159
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007478	Ribosomal_S5_C	PF03719.15	9.7e-21	1	1
ENSODEP00000007478	Ribosomal_S5	PF00333.20	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007592	-	714	-	ENSODEP00000007478	237 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005578	-	55	64.885	ENSODEG00000014327	-	72	79.545
ENSODEG00000005578	-	78	57.759	ENSODEG00000016994	-	82	58.261
ENSODEG00000005578	-	77	65.000	ENSODEG00000020116	-	82	65.417
ENSODEG00000005578	-	77	59.583	ENSODEG00000000015	-	81	60.000
ENSODEG00000005578	-	76	62.931	ENSODEG00000007912	-	83	63.362
ENSODEG00000005578	-	100	53.220	ENSODEG00000018026	-	89	60.417
ENSODEG00000005578	-	78	63.934	ENSODEG00000000424	-	92	63.900
ENSODEG00000005578	-	77	63.333	ENSODEG00000009611	-	93	63.750
ENSODEG00000005578	-	77	65.000	ENSODEG00000001518	-	92	65.000
ENSODEG00000005578	-	79	59.184	ENSODEG00000007629	-	93	63.333
ENSODEG00000005578	-	69	51.584	ENSODEG00000002815	-	100	51.584
ENSODEG00000005578	-	77	65.417	ENSODEG00000013906	-	82	65.833
ENSODEG00000005578	-	53	42.623	ENSODEG00000010744	-	68	42.038
ENSODEG00000005578	-	75	82.162	ENSODEG00000003328	-	78	82.418
ENSODEG00000005578	-	77	85.792	ENSODEG00000009513	-	76	86.264
ENSODEG00000005578	-	77	84.066	ENSODEG00000013571	-	80	84.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005578	-	71	61.404	ENSAMEG00000009620	-	100	61.404	Ailuropoda_melanoleuca
ENSODEG00000005578	-	83	52.653	ENSAMEG00000004788	-	86	54.867	Ailuropoda_melanoleuca
ENSODEG00000005578	-	82	77.320	ENSANAG00000024142	-	94	78.571	Aotus_nancymaae
ENSODEG00000005578	-	100	61.348	ENSANAG00000032222	-	88	67.841	Aotus_nancymaae
ENSODEG00000005578	-	78	64.979	ENSANAG00000037095	-	90	64.807	Aotus_nancymaae
ENSODEG00000005578	-	77	67.965	ENSANAG00000011194	-	89	67.965	Aotus_nancymaae
ENSODEG00000005578	-	95	72.321	ENSANAG00000031734	-	82	75.824	Aotus_nancymaae
ENSODEG00000005578	-	100	71.369	ENSCJAG00000000635	-	76	77.473	Callithrix_jacchus
ENSODEG00000005578	-	77	90.110	ENSCJAG00000035386	-	78	90.110	Callithrix_jacchus
ENSODEG00000005578	-	77	86.301	ENSCAFG00000017509	-	90	63.180	Canis_familiaris
ENSODEG00000005578	-	95	59.636	ENSCHIG00000011477	-	83	62.661	Capra_hircus
ENSODEG00000005578	-	78	61.411	ENSTSYG00000033139	-	95	61.088	Carlito_syrichta
ENSODEG00000005578	-	78	60.759	ENSTSYG00000031079	-	97	58.723	Carlito_syrichta
ENSODEG00000005578	-	81	60.905	ENSTSYG00000027421	-	92	61.373	Carlito_syrichta
ENSODEG00000005578	-	69	60.648	ENSTSYG00000029261	-	87	61.111	Carlito_syrichta
ENSODEG00000005578	-	70	78.788	ENSTSYG00000034130	-	76	77.976	Carlito_syrichta
ENSODEG00000005578	-	74	47.727	ENSCPOG00000026421	-	100	48.182	Cavia_porcellus
ENSODEG00000005578	-	92	65.600	ENSCCAG00000020850	-	84	69.302	Cebus_capucinus
ENSODEG00000005578	-	77	85.165	ENSCCAG00000030295	-	79	85.165	Cebus_capucinus
ENSODEG00000005578	-	81	53.909	ENSCCAG00000028120	-	94	55.274	Cebus_capucinus
ENSODEG00000005578	-	92	64.659	ENSCATG00000031773	-	91	69.626	Cercocebus_atys
ENSODEG00000005578	-	100	68.354	ENSCATG00000036372	-	77	75.824	Cercocebus_atys
ENSODEG00000005578	-	78	79.348	ENSCATG00000032289	-	76	79.121	Cercocebus_atys
ENSODEG00000005578	-	77	64.192	ENSCLAG00000014879	-	99	64.317	Chinchilla_lanigera
ENSODEG00000005578	-	83	56.790	ENSCLAG00000008450	-	91	57.018	Chinchilla_lanigera
ENSODEG00000005578	-	91	68.860	ENSCLAG00000000810	-	87	68.203	Chinchilla_lanigera
ENSODEG00000005578	-	76	77.596	ENSCLAG00000011924	-	80	77.596	Chinchilla_lanigera
ENSODEG00000005578	-	100	72.996	ENSCLAG00000005355	-	80	84.066	Chinchilla_lanigera
ENSODEG00000005578	-	77	90.110	ENSCANG00000040571	-	77	90.110	Colobus_angolensis_palliatus
ENSODEG00000005578	-	100	71.429	ENSCANG00000031673	-	79	82.418	Colobus_angolensis_palliatus
ENSODEG00000005578	-	97	74.892	ENSCANG00000040877	-	79	84.066	Colobus_angolensis_palliatus
ENSODEG00000005578	-	73	60.000	ENSCGRG00001013970	-	93	61.026	Cricetulus_griseus_chok1gshd
ENSODEG00000005578	-	77	69.264	ENSCGRG00001006245	-	89	69.264	Cricetulus_griseus_chok1gshd
ENSODEG00000005578	-	77	62.500	ENSCGRG00001009609	-	100	62.500	Cricetulus_griseus_chok1gshd
ENSODEG00000005578	-	77	79.121	ENSCGRG00001022768	-	81	79.121	Cricetulus_griseus_chok1gshd
ENSODEG00000005578	-	77	79.899	ENSCGRG00000009196	-	84	79.899	Cricetulus_griseus_crigri
ENSODEG00000005578	-	73	60.000	ENSCGRG00000006603	-	93	61.026	Cricetulus_griseus_crigri
ENSODEG00000005578	-	78	70.000	ENSCGRG00000002188	-	85	70.183	Cricetulus_griseus_crigri
ENSODEG00000005578	-	69	63.500	ENSDNOG00000010490	-	91	64.118	Dasypus_novemcinctus
ENSODEG00000005578	-	54	65.672	ENSDNOG00000045256	-	62	65.672	Dasypus_novemcinctus
ENSODEG00000005578	-	63	59.333	ENSDNOG00000038786	-	81	54.386	Dasypus_novemcinctus
ENSODEG00000005578	-	82	65.596	ENSDORG00000023277	-	93	67.805	Dipodomys_ordii
ENSODEG00000005578	-	73	59.556	ENSDORG00000024425	-	87	59.556	Dipodomys_ordii
ENSODEG00000005578	-	99	59.289	ENSDORG00000024657	-	92	69.543	Dipodomys_ordii
ENSODEG00000005578	-	78	54.113	ENSDORG00000030221	-	90	53.712	Dipodomys_ordii
ENSODEG00000005578	-	73	57.727	ENSDORG00000025335	-	92	57.727	Dipodomys_ordii
ENSODEG00000005578	-	92	46.691	ENSETEG00000008215	-	85	47.679	Echinops_telfairi
ENSODEG00000005578	-	77	79.781	ENSEASG00005014316	-	73	79.781	Equus_asinus_asinus
ENSODEG00000005578	-	64	53.672	ENSEEUG00000013311	-	96	54.070	Erinaceus_europaeus
ENSODEG00000005578	-	77	53.552	ENSFCAG00000032362	-	80	53.297	Felis_catus
ENSODEG00000005578	-	78	63.519	ENSFDAG00000003864	-	91	63.478	Fukomys_damarensis
ENSODEG00000005578	-	68	67.045	ENSHGLG00000007652	-	99	67.045	Heterocephalus_glaber_female
ENSODEG00000005578	-	100	50.973	ENSHGLG00000007017	-	88	57.921	Heterocephalus_glaber_female
ENSODEG00000005578	-	100	50.973	ENSHGLG00100002247	-	88	57.921	Heterocephalus_glaber_male
ENSODEG00000005578	-	68	67.045	ENSHGLG00100005590	-	99	67.045	Heterocephalus_glaber_male
ENSODEG00000005578	-	69	70.616	ENSHGLG00100021251	-	100	70.616	Heterocephalus_glaber_male
ENSODEG00000005578	-	81	59.336	ENSJJAG00000021348	-	95	59.307	Jaculus_jaculus
ENSODEG00000005578	-	59	63.736	ENSJJAG00000009920	-	81	58.333	Jaculus_jaculus
ENSODEG00000005578	-	52	48.295	ENSLAFG00000025689	-	80	48.295	Loxodonta_africana
ENSODEG00000005578	-	77	42.308	ENSLAFG00000025960	-	100	40.598	Loxodonta_africana
ENSODEG00000005578	-	100	59.494	ENSLAFG00000032675	-	81	65.385	Loxodonta_africana
ENSODEG00000005578	-	97	52.549	ENSMFAG00000036581	-	90	59.223	Macaca_fascicularis
ENSODEG00000005578	-	77	78.571	ENSMFAG00000033104	-	76	78.571	Macaca_fascicularis
ENSODEG00000005578	-	74	66.667	ENSMFAG00000038684	-	76	66.667	Macaca_fascicularis
ENSODEG00000005578	-	85	68.696	ENSMFAG00000040549	-	88	70.142	Macaca_fascicularis
ENSODEG00000005578	-	77	85.165	ENSMMUG00000000619	-	77	85.165	Macaca_mulatta
ENSODEG00000005578	-	81	68.919	ENSMMUG00000048399	-	88	69.668	Macaca_mulatta
ENSODEG00000005578	-	77	86.813	ENSMMUG00000015519	-	78	86.813	Macaca_mulatta
ENSODEG00000005578	-	77	78.022	ENSMNEG00000042646	-	76	78.022	Macaca_nemestrina
ENSODEG00000005578	-	100	52.107	ENSMNEG00000014551	-	90	59.223	Macaca_nemestrina
ENSODEG00000005578	-	100	61.566	ENSMNEG00000032346	-	81	63.717	Macaca_nemestrina
ENSODEG00000005578	-	78	72.283	ENSMNEG00000003341	-	86	71.978	Macaca_nemestrina
ENSODEG00000005578	-	77	75.135	ENSMNEG00000031742	-	78	75.135	Macaca_nemestrina
ENSODEG00000005578	-	77	60.996	ENSMLEG00000037553	-	93	61.250	Mandrillus_leucophaeus
ENSODEG00000005578	-	81	69.397	ENSMLEG00000041622	-	100	63.043	Mandrillus_leucophaeus
ENSODEG00000005578	-	100	50.958	ENSMLEG00000032385	-	91	58.738	Mandrillus_leucophaeus
ENSODEG00000005578	-	87	66.803	ENSMLEG00000029661	-	88	69.585	Mandrillus_leucophaeus
ENSODEG00000005578	-	92	67.068	ENSMLEG00000043748	-	93	69.159	Mandrillus_leucophaeus
ENSODEG00000005578	-	77	71.429	ENSMAUG00000006005	-	94	65.550	Mesocricetus_auratus
ENSODEG00000005578	-	77	70.000	ENSMAUG00000010957	-	92	70.000	Mesocricetus_auratus
ENSODEG00000005578	-	54	61.850	ENSMAUG00000000957	-	87	61.850	Mesocricetus_auratus
ENSODEG00000005578	-	77	63.850	ENSMICG00000028319	-	90	63.850	Microcebus_murinus
ENSODEG00000005578	-	100	76.569	ENSMOCG00000000227	-	79	80.978	Microtus_ochrogaster
ENSODEG00000005578	-	77	83.784	ENSMOCG00000010657	-	78	83.784	Microtus_ochrogaster
ENSODEG00000005578	-	77	67.914	ENSMOCG00000010673	-	88	67.914	Microtus_ochrogaster
ENSODEG00000005578	-	74	77.273	ENSMPUG00000015629	-	93	52.232	Mustela_putorius_furo
ENSODEG00000005578	-	82	45.228	ENSMPUG00000015799	-	91	45.374	Mustela_putorius_furo
ENSODEG00000005578	-	73	43.913	ENSMPUG00000000576	-	89	43.668	Mustela_putorius_furo
ENSODEG00000005578	-	65	50.754	ENSMPUG00000004669	-	95	50.754	Mustela_putorius_furo
ENSODEG00000005578	-	76	48.945	ENSMLUG00000029122	-	100	48.945	Myotis_lucifugus
ENSODEG00000005578	-	76	58.650	ENSMLUG00000025746	-	100	58.650	Myotis_lucifugus
ENSODEG00000005578	-	83	50.000	ENSMLUG00000030388	-	92	49.580	Myotis_lucifugus
ENSODEG00000005578	-	69	54.930	ENSMLUG00000022940	-	99	53.738	Myotis_lucifugus
ENSODEG00000005578	-	81	67.241	ENSNGAG00000009664	-	84	67.265	Nannospalax_galili
ENSODEG00000005578	-	69	59.330	ENSNGAG00000013032	-	100	59.330	Nannospalax_galili
ENSODEG00000005578	-	81	66.505	ENSNLEG00000031715	-	83	66.505	Nomascus_leucogenys
ENSODEG00000005578	-	78	71.795	ENSNLEG00000029205	-	90	71.429	Nomascus_leucogenys
ENSODEG00000005578	-	77	53.960	ENSNLEG00000031959	-	89	52.970	Nomascus_leucogenys
ENSODEG00000005578	-	78	60.744	ENSNLEG00000032733	-	96	65.000	Nomascus_leucogenys
ENSODEG00000005578	-	100	68.750	ENSNLEG00000034998	-	78	73.077	Nomascus_leucogenys
ENSODEG00000005578	-	77	58.416	ENSNLEG00000033986	-	90	58.911	Nomascus_leucogenys
ENSODEG00000005578	-	82	68.831	ENSOCUG00000012731	-	88	70.776	Oryctolagus_cuniculus
ENSODEG00000005578	-	100	46.441	ENSOCUG00000026627	-	91	62.136	Oryctolagus_cuniculus
ENSODEG00000005578	-	76	63.983	ENSOCUG00000009140	-	93	65.254	Oryctolagus_cuniculus
ENSODEG00000005578	-	75	51.376	ENSOCUG00000026818	-	100	50.917	Oryctolagus_cuniculus
ENSODEG00000005578	-	85	53.815	ENSOGAG00000024844	-	85	53.448	Otolemur_garnettii
ENSODEG00000005578	-	100	44.792	ENSOARG00000007975	-	89	49.138	Ovis_aries
ENSODEG00000005578	-	77	47.899	ENSOARG00000016075	-	90	47.679	Ovis_aries
ENSODEG00000005578	-	78	50.617	ENSPPAG00000023840	-	95	52.066	Pan_paniscus
ENSODEG00000005578	-	73	81.143	ENSPPAG00000040669	-	72	81.143	Pan_paniscus
ENSODEG00000005578	-	78	62.500	ENSPPAG00000009718	-	87	62.150	Pan_paniscus
ENSODEG00000005578	-	77	85.185	ENSPPAG00000039385	-	79	85.185	Pan_paniscus
ENSODEG00000005578	-	90	58.559	ENSPPAG00000029238	-	91	54.185	Pan_paniscus
ENSODEG00000005578	-	83	70.297	ENSPTIG00000016889	-	78	70.968	Panthera_tigris_altaica
ENSODEG00000005578	-	77	83.516	ENSPTRG00000045200	-	77	83.516	Pan_troglodytes
ENSODEG00000005578	-	77	79.670	ENSPTRG00000052447	-	80	79.670	Pan_troglodytes
ENSODEG00000005578	-	78	61.574	ENSPTRG00000047742	-	87	61.682	Pan_troglodytes
ENSODEG00000005578	-	81	50.996	ENSPTRG00000051295	-	95	52.479	Pan_troglodytes
ENSODEG00000005578	-	77	77.473	ENSPANG00000010731	-	76	77.473	Papio_anubis
ENSODEG00000005578	-	79	66.667	ENSPANG00000017609	-	94	66.814	Papio_anubis
ENSODEG00000005578	-	76	80.110	ENSPANG00000033494	-	77	80.110	Papio_anubis
ENSODEG00000005578	-	74	60.526	ENSPANG00000005237	-	100	60.526	Papio_anubis
ENSODEG00000005578	-	76	54.271	ENSPCIG00000002626	-	92	54.229	Phascolarctos_cinereus
ENSODEG00000005578	-	77	78.571	ENSPCIG00000028447	-	84	78.571	Phascolarctos_cinereus
ENSODEG00000005578	-	74	64.286	ENSPCOG00000013912	-	96	64.286	Propithecus_coquereli
ENSODEG00000005578	-	99	52.669	ENSPCOG00000002064	-	88	57.456	Propithecus_coquereli
ENSODEG00000005578	-	99	56.338	ENSPCOG00000014063	-	72	61.860	Propithecus_coquereli
ENSODEG00000005578	-	73	42.857	ENSRNOG00000022450	AABR07063975.1	100	42.601	Rattus_norvegicus
ENSODEG00000005578	-	77	90.110	ENSRNOG00000030174	AABR07042903.1	79	90.110	Rattus_norvegicus
ENSODEG00000005578	-	77	59.794	ENSRBIG00000038037	-	91	59.794	Rhinopithecus_bieti
ENSODEG00000005578	-	77	57.143	ENSRBIG00000039210	-	87	57.143	Rhinopithecus_bieti
ENSODEG00000005578	-	78	62.562	ENSRBIG00000030797	-	86	62.687	Rhinopithecus_bieti
ENSODEG00000005578	-	78	72.477	ENSRBIG00000028707	-	90	73.023	Rhinopithecus_bieti
ENSODEG00000005578	-	79	61.345	ENSRROG00000033610	-	91	59.296	Rhinopithecus_roxellana
ENSODEG00000005578	-	77	59.223	ENSRROG00000039410	-	90	59.709	Rhinopithecus_roxellana
ENSODEG00000005578	-	76	59.746	ENSRROG00000031151	-	92	62.712	Rhinopithecus_roxellana
ENSODEG00000005578	-	79	65.000	ENSSBOG00000020329	-	89	64.681	Saimiri_boliviensis_boliviensis
ENSODEG00000005578	-	100	70.042	ENSSBOG00000024457	-	81	76.374	Saimiri_boliviensis_boliviensis
ENSODEG00000005578	-	81	64.249	ENSSBOG00000025337	-	77	92.771	Saimiri_boliviensis_boliviensis
ENSODEG00000005578	-	82	47.619	ENSSBOG00000010731	-	86	60.515	Saimiri_boliviensis_boliviensis
ENSODEG00000005578	-	92	57.692	ENSSBOG00000028226	-	91	58.989	Saimiri_boliviensis_boliviensis
ENSODEG00000005578	-	72	56.497	ENSSSCG00000033866	-	89	56.497	Sus_scrofa
ENSODEG00000005578	-	87	58.091	ENSSSCG00000033125	-	84	60.000	Sus_scrofa
ENSODEG00000005578	-	56	52.695	ENSSSCG00000031475	-	82	52.695	Sus_scrofa
ENSODEG00000005578	-	84	63.877	ENSSSCG00000031982	-	89	67.633	Sus_scrofa
ENSODEG00000005578	-	77	87.912	ENSVVUG00000015747	-	74	87.912	Vulpes_vulpes