EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005580 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1816 bases
Position: chrJH651625.1:10456123-10457938
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007480	RRM_1	PF00076.22	4.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007594	-	478	-	ENSODEP00000007480	90 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005580	-	93	43.038	ENSODEG00000008757	-	50	41.176
ENSODEG00000005580	-	73	37.879	ENSODEG00000012177	-	53	37.879
ENSODEG00000005580	-	67	58.333	ENSODEG00000009372	-	61	58.333
ENSODEG00000005580	-	58	40.385	ENSODEG00000003118	-	73	40.385
ENSODEG00000005580	-	71	48.438	ENSODEG00000006061	SRSF9	50	48.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005580	-	87	92.308	ENSG00000147274	RBMX	97	97.222	Homo_sapiens
ENSODEG00000005580	-	80	90.278	ENSAMEG00000010565	-	100	90.278	Ailuropoda_melanoleuca
ENSODEG00000005580	-	87	92.308	ENSANAG00000028304	RBMX	100	92.308	Aotus_nancymaae
ENSODEG00000005580	-	80	95.833	ENSANAG00000028483	-	77	95.833	Aotus_nancymaae
ENSODEG00000005580	-	80	98.611	ENSANAG00000037179	-	87	98.611	Aotus_nancymaae
ENSODEG00000005580	-	87	92.308	ENSCJAG00000040528	-	100	92.308	Callithrix_jacchus
ENSODEG00000005580	-	89	90.000	ENSCJAG00000041629	-	90	90.000	Callithrix_jacchus
ENSODEG00000005580	-	80	98.611	ENSCAFG00020024552	RBMXL1	88	98.611	Canis_lupus_dingo
ENSODEG00000005580	-	72	90.769	ENSCAFG00020025109	-	79	90.769	Canis_lupus_dingo
ENSODEG00000005580	-	80	97.222	ENSCAFG00020026533	-	51	97.222	Canis_lupus_dingo
ENSODEG00000005580	-	71	84.375	ENSCAFG00020008202	-	50	84.375	Canis_lupus_dingo
ENSODEG00000005580	-	80	98.611	ENSCPOG00000012164	RBMX	70	98.611	Cavia_porcellus
ENSODEG00000005580	-	80	93.056	ENSCCAG00000037368	-	74	93.056	Cebus_capucinus
ENSODEG00000005580	-	80	98.611	ENSCCAG00000028588	-	88	98.611	Cebus_capucinus
ENSODEG00000005580	-	83	98.667	ENSCCAG00000036263	-	89	98.667	Cebus_capucinus
ENSODEG00000005580	-	81	79.452	ENSCATG00000032253	-	88	79.452	Cercocebus_atys
ENSODEG00000005580	-	87	92.308	ENSCATG00000034355	-	100	92.308	Cercocebus_atys
ENSODEG00000005580	-	87	92.308	ENSCANG00000031609	-	100	92.308	Colobus_angolensis_palliatus
ENSODEG00000005580	-	80	98.611	ENSCANG00000038825	-	73	98.611	Colobus_angolensis_palliatus
ENSODEG00000005580	-	80	98.611	ENSCGRG00000001522	Rbmx	70	98.611	Cricetulus_griseus_crigri
ENSODEG00000005580	-	80	98.611	ENSDORG00000015481	-	70	98.611	Dipodomys_ordii
ENSODEG00000005580	-	80	98.611	ENSGGOG00000037578	-	84	98.611	Gorilla_gorilla
ENSODEG00000005580	-	80	98.611	ENSHGLG00000011055	RBMX	70	98.611	Heterocephalus_glaber_female
ENSODEG00000005580	-	80	93.056	ENSHGLG00000006125	-	51	93.056	Heterocephalus_glaber_female
ENSODEG00000005580	-	80	76.389	ENSHGLG00100000887	-	77	76.389	Heterocephalus_glaber_male
ENSODEG00000005580	-	80	98.611	ENSHGLG00100001361	-	70	98.611	Heterocephalus_glaber_male
ENSODEG00000005580	-	87	92.308	ENSMFAG00000032479	RBMX	100	92.308	Macaca_fascicularis
ENSODEG00000005580	-	81	79.452	ENSMNEG00000027176	-	88	79.452	Macaca_nemestrina
ENSODEG00000005580	-	87	92.308	ENSMNEG00000033588	-	100	92.308	Macaca_nemestrina
ENSODEG00000005580	-	87	92.308	ENSMLEG00000021095	-	100	92.308	Mandrillus_leucophaeus
ENSODEG00000005580	-	80	95.833	ENSMLEG00000009623	-	86	95.833	Mandrillus_leucophaeus
ENSODEG00000005580	-	79	94.366	ENSMICG00000030109	-	60	94.366	Microcebus_murinus
ENSODEG00000005580	-	77	92.754	ENSMICG00000031444	-	94	86.667	Microcebus_murinus
ENSODEG00000005580	-	80	93.056	ENSMOCG00000004335	-	91	93.056	Microtus_ochrogaster
ENSODEG00000005580	-	80	98.611	MGP_CAROLIEiJ_G0033098	Rbmx	70	98.611	Mus_caroli
ENSODEG00000005580	-	80	98.611	ENSMUSG00000031134	Rbmx	70	98.611	Mus_musculus
ENSODEG00000005580	-	80	98.611	MGP_PahariEiJ_G0031641	Rbmx	70	98.611	Mus_pahari
ENSODEG00000005580	-	80	98.611	MGP_SPRETEiJ_G0034253	Rbmx	70	98.611	Mus_spretus
ENSODEG00000005580	-	80	88.889	ENSNGAG00000011475	-	54	88.889	Nannospalax_galili
ENSODEG00000005580	-	80	90.278	ENSPPAG00000031010	-	86	90.278	Pan_paniscus
ENSODEG00000005580	-	87	92.308	ENSPPAG00000028409	-	100	92.308	Pan_paniscus
ENSODEG00000005580	-	87	92.308	ENSPTRG00000052587	RBMX	100	92.308	Pan_troglodytes
ENSODEG00000005580	-	80	98.611	ENSPANG00000030653	-	87	98.611	Papio_anubis
ENSODEG00000005580	-	87	92.308	ENSPANG00000018448	-	100	92.308	Papio_anubis
ENSODEG00000005580	-	79	77.465	ENSPCIG00000018117	-	72	77.465	Phascolarctos_cinereus
ENSODEG00000005580	-	80	93.056	ENSPPYG00000019152	-	56	93.056	Pongo_abelii
ENSODEG00000005580	-	83	98.667	ENSPCOG00000013607	-	96	98.667	Propithecus_coquereli
ENSODEG00000005580	-	81	79.452	ENSRBIG00000030841	-	88	79.452	Rhinopithecus_bieti
ENSODEG00000005580	-	87	92.308	ENSRBIG00000042033	-	100	92.308	Rhinopithecus_bieti
ENSODEG00000005580	-	87	92.308	ENSRROG00000041167	-	100	92.308	Rhinopithecus_roxellana
ENSODEG00000005580	-	80	94.444	ENSRROG00000034426	-	78	88.158	Rhinopithecus_roxellana
ENSODEG00000005580	-	80	95.833	ENSSBOG00000026502	-	74	95.833	Saimiri_boliviensis_boliviensis
ENSODEG00000005580	-	73	75.758	ENSSBOG00000021152	-	83	75.758	Saimiri_boliviensis_boliviensis
ENSODEG00000005580	-	82	90.541	ENSUAMG00000002157	-	93	90.541	Ursus_americanus