EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000005593 (Gene tree)
Gene ID: 101562650
Gene Symbol: URB2
Alias: KIAA0133|NET10|NPA2
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 26561 bases
Position: chrJH651642.1:497843-524403
Accession: 101562650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007500	Urb2	PF10441.9	5.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007614	URB2-201	4533	XM_004640810	ENSODEP00000007500	1510 (aa)	XP_004640867	-

Gene Model

Click here to download ENSODEG00000005593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005593's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005593	URB2	100	76.247	ENSG00000135763	URB2	99	87.952	Homo_sapiens
ENSODEG00000005593	URB2	90	36.061	ENSAPOG00000000608	urb2	95	36.130	Acanthochromis_polyacanthus
ENSODEG00000005593	URB2	99	75.033	ENSAMEG00000009206	URB2	99	75.033	Ailuropoda_melanoleuca
ENSODEG00000005593	URB2	99	36.173	ENSAOCG00000019961	urb2	99	36.276	Amphiprion_ocellaris
ENSODEG00000005593	URB2	99	36.053	ENSAPEG00000005263	urb2	99	36.156	Amphiprion_percula
ENSODEG00000005593	URB2	99	35.463	ENSATEG00000020930	urb2	99	34.977	Anabas_testudineus
ENSODEG00000005593	URB2	97	49.040	ENSAPLG00000002998	URB2	100	48.908	Anas_platyrhynchos
ENSODEG00000005593	URB2	100	47.477	ENSACAG00000001285	URB2	100	47.477	Anolis_carolinensis
ENSODEG00000005593	URB2	100	76.575	ENSANAG00000033963	URB2	100	76.575	Aotus_nancymaae
ENSODEG00000005593	URB2	90	35.533	ENSACLG00000009254	urb2	95	35.435	Astatotilapia_calliptera
ENSODEG00000005593	URB2	100	36.352	ENSAMXG00000003474	urb2	100	36.223	Astyanax_mexicanus
ENSODEG00000005593	URB2	99	69.731	ENSBTAG00000010180	URB2	99	69.731	Bos_taurus
ENSODEG00000005593	URB2	95	85.106	ENSCJAG00000010968	URB2	100	76.378	Callithrix_jacchus
ENSODEG00000005593	URB2	100	74.787	ENSCAFG00000012118	URB2	100	74.787	Canis_familiaris
ENSODEG00000005593	URB2	93	73.366	ENSCAFG00020027217	URB2	99	73.366	Canis_lupus_dingo
ENSODEG00000005593	URB2	99	69.731	ENSCHIG00000014513	URB2	99	69.731	Capra_hircus
ENSODEG00000005593	URB2	99	74.458	ENSTSYG00000006924	URB2	99	74.458	Carlito_syrichta
ENSODEG00000005593	URB2	64	92.523	ENSCPOG00000020777	-	100	88.696	Cavia_porcellus
ENSODEG00000005593	URB2	100	76.575	ENSCCAG00000023932	URB2	100	76.575	Cebus_capucinus
ENSODEG00000005593	URB2	100	76.181	ENSCATG00000043366	URB2	100	76.181	Cercocebus_atys
ENSODEG00000005593	URB2	100	89.359	ENSCLAG00000006268	URB2	100	89.359	Chinchilla_lanigera
ENSODEG00000005593	URB2	100	76.115	ENSCSAG00000010599	URB2	100	76.115	Chlorocebus_sabaeus
ENSODEG00000005593	URB2	69	74.422	ENSCHOG00000010163	URB2	70	74.422	Choloepus_hoffmanni
ENSODEG00000005593	URB2	100	52.824	ENSCPBG00000006191	URB2	100	52.824	Chrysemys_picta_bellii
ENSODEG00000005593	URB2	100	76.247	ENSCANG00000023711	URB2	100	76.247	Colobus_angolensis_palliatus
ENSODEG00000005593	URB2	100	72.543	ENSCGRG00001009591	Urb2	100	72.543	Cricetulus_griseus_chok1gshd
ENSODEG00000005593	URB2	100	72.543	ENSCGRG00000011259	Urb2	100	72.543	Cricetulus_griseus_crigri
ENSODEG00000005593	URB2	99	33.978	ENSCSEG00000000299	urb2	99	33.918	Cynoglossus_semilaevis
ENSODEG00000005593	URB2	99	34.884	ENSCVAG00000011011	urb2	99	34.700	Cyprinodon_variegatus
ENSODEG00000005593	URB2	99	36.900	ENSDARG00000003217	urb2	99	52.336	Danio_rerio
ENSODEG00000005593	URB2	97	59.109	ENSDNOG00000043064	URB2	99	59.109	Dasypus_novemcinctus
ENSODEG00000005593	URB2	100	75.000	ENSDORG00000014975	Urb2	100	75.000	Dipodomys_ordii
ENSODEG00000005593	URB2	95	69.396	ENSETEG00000002869	URB2	95	69.396	Echinops_telfairi
ENSODEG00000005593	URB2	99	74.918	ENSEASG00005012060	URB2	99	74.984	Equus_asinus_asinus
ENSODEG00000005593	URB2	93	83.688	ENSECAG00000012338	URB2	99	83.688	Equus_caballus
ENSODEG00000005593	URB2	92	78.014	ENSEEUG00000002669	URB2	92	78.014	Erinaceus_europaeus
ENSODEG00000005593	URB2	99	40.194	ENSELUG00000014647	urb2	99	40.065	Esox_lucius
ENSODEG00000005593	URB2	100	74.196	ENSFCAG00000007662	URB2	100	74.196	Felis_catus
ENSODEG00000005593	URB2	100	49.355	ENSFALG00000003385	URB2	100	49.355	Ficedula_albicollis
ENSODEG00000005593	URB2	100	86.289	ENSFDAG00000021079	URB2	100	86.289	Fukomys_damarensis
ENSODEG00000005593	URB2	99	34.929	ENSFHEG00000010357	urb2	99	35.089	Fundulus_heteroclitus
ENSODEG00000005593	URB2	99	36.200	ENSGMOG00000012459	urb2	100	35.696	Gadus_morhua
ENSODEG00000005593	URB2	100	49.775	ENSGALG00000011101	URB2	100	49.613	Gallus_gallus
ENSODEG00000005593	URB2	99	37.661	ENSGACG00000016179	urb2	99	37.725	Gasterosteus_aculeatus
ENSODEG00000005593	URB2	100	52.537	ENSGAGG00000021879	URB2	100	52.537	Gopherus_agassizii
ENSODEG00000005593	URB2	100	76.050	ENSGGOG00000025643	URB2	100	76.050	Gorilla_gorilla
ENSODEG00000005593	URB2	99	51.235	ENSHBUG00000018469	urb2	97	51.235	Haplochromis_burtoni
ENSODEG00000005593	URB2	97	88.415	ENSHGLG00000016561	URB2	99	88.415	Heterocephalus_glaber_female
ENSODEG00000005593	URB2	100	85.695	ENSHGLG00100001838	URB2	100	85.695	Heterocephalus_glaber_male
ENSODEG00000005593	URB2	99	36.652	ENSIPUG00000020315	urb2	99	36.293	Ictalurus_punctatus
ENSODEG00000005593	URB2	100	75.608	ENSSTOG00000025323	URB2	100	75.608	Ictidomys_tridecemlineatus
ENSODEG00000005593	URB2	100	74.443	ENSJJAG00000011998	Urb2	100	74.443	Jaculus_jaculus
ENSODEG00000005593	URB2	99	34.096	ENSKMAG00000020129	urb2	99	34.157	Kryptolebias_marmoratus
ENSODEG00000005593	URB2	100	45.238	ENSLACG00000002038	URB2	100	45.484	Latimeria_chalumnae
ENSODEG00000005593	URB2	100	41.538	ENSLOCG00000015462	urb2	100	41.603	Lepisosteus_oculatus
ENSODEG00000005593	URB2	99	72.930	ENSLAFG00000012484	URB2	100	72.930	Loxodonta_africana
ENSODEG00000005593	URB2	100	75.853	ENSMFAG00000039905	URB2	100	75.853	Macaca_fascicularis
ENSODEG00000005593	URB2	100	75.984	ENSMMUG00000009509	URB2	100	75.984	Macaca_mulatta
ENSODEG00000005593	URB2	100	76.312	ENSMNEG00000038762	URB2	100	76.312	Macaca_nemestrina
ENSODEG00000005593	URB2	100	76.115	ENSMLEG00000043252	URB2	100	76.115	Mandrillus_leucophaeus
ENSODEG00000005593	URB2	99	34.335	ENSMAMG00000020365	urb2	99	34.099	Mastacembelus_armatus
ENSODEG00000005593	URB2	99	35.565	ENSMZEG00005011027	urb2	99	35.540	Maylandia_zebra
ENSODEG00000005593	URB2	94	46.311	ENSMGAG00000012073	URB2	100	46.311	Meleagris_gallopavo
ENSODEG00000005593	URB2	95	86.525	ENSMAUG00000017980	Urb2	99	86.525	Mesocricetus_auratus
ENSODEG00000005593	URB2	99	76.165	ENSMICG00000033302	URB2	99	76.165	Microcebus_murinus
ENSODEG00000005593	URB2	100	72.375	ENSMOCG00000020369	Urb2	100	72.375	Microtus_ochrogaster
ENSODEG00000005593	URB2	99	35.706	ENSMALG00000006529	urb2	99	35.819	Monopterus_albus
ENSODEG00000005593	URB2	100	71.438	ENSMUSG00000031976	Urb2	100	71.438	Mus_musculus
ENSODEG00000005593	URB2	100	73.473	ENSMPUG00000012438	URB2	100	73.473	Mustela_putorius_furo
ENSODEG00000005593	URB2	100	72.018	ENSNGAG00000016524	Urb2	100	72.018	Nannospalax_galili
ENSODEG00000005593	URB2	100	75.591	ENSNLEG00000014450	URB2	100	75.591	Nomascus_leucogenys
ENSODEG00000005593	URB2	91	60.085	ENSMEUG00000016434	URB2	94	60.085	Notamacropus_eugenii
ENSODEG00000005593	URB2	92	72.666	ENSOPRG00000009906	URB2	92	72.666	Ochotona_princeps
ENSODEG00000005593	URB2	99	38.009	ENSONIG00000017078	urb2	99	37.911	Oreochromis_niloticus
ENSODEG00000005593	URB2	100	49.540	ENSOANG00000013732	URB2	100	49.934	Ornithorhynchus_anatinus
ENSODEG00000005593	URB2	99	75.756	ENSOCUG00000010700	URB2	99	75.756	Oryctolagus_cuniculus
ENSODEG00000005593	URB2	99	35.645	ENSORLG00000010915	urb2	99	35.762	Oryzias_latipes
ENSODEG00000005593	URB2	99	35.445	ENSORLG00020003361	urb2	99	35.641	Oryzias_latipes_hni
ENSODEG00000005593	URB2	99	35.662	ENSORLG00015001534	urb2	99	35.784	Oryzias_latipes_hsok
ENSODEG00000005593	URB2	99	34.945	ENSOMEG00000010076	urb2	99	34.966	Oryzias_melastigma
ENSODEG00000005593	URB2	99	72.835	ENSOGAG00000003021	URB2	99	72.835	Otolemur_garnettii
ENSODEG00000005593	URB2	99	69.402	ENSOARG00000003102	URB2	99	69.599	Ovis_aries
ENSODEG00000005593	URB2	100	76.575	ENSPPAG00000040629	URB2	100	76.575	Pan_paniscus
ENSODEG00000005593	URB2	100	73.867	ENSPPRG00000012767	URB2	100	73.867	Panthera_pardus
ENSODEG00000005593	URB2	100	74.064	ENSPTIG00000012577	URB2	100	74.064	Panthera_tigris_altaica
ENSODEG00000005593	URB2	100	76.181	ENSPTRG00000002092	URB2	100	76.181	Pan_troglodytes
ENSODEG00000005593	URB2	100	74.278	ENSPANG00000002245	URB2	100	74.278	Papio_anubis
ENSODEG00000005593	URB2	100	39.010	ENSPKIG00000005787	urb2	100	38.817	Paramormyrops_kingsleyae
ENSODEG00000005593	URB2	100	52.115	ENSPSIG00000002690	URB2	100	52.115	Pelodiscus_sinensis
ENSODEG00000005593	URB2	96	72.640	ENSPEMG00000019551	Urb2	100	72.640	Peromyscus_maniculatus_bairdii
ENSODEG00000005593	URB2	100	60.944	ENSPCIG00000030071	URB2	100	60.944	Phascolarctos_cinereus
ENSODEG00000005593	URB2	99	35.911	ENSPFOG00000014330	urb2	99	36.118	Poecilia_formosa
ENSODEG00000005593	URB2	99	35.174	ENSPLAG00000014654	urb2	99	35.456	Poecilia_latipinna
ENSODEG00000005593	URB2	99	34.823	ENSPMEG00000012356	urb2	99	35.144	Poecilia_mexicana
ENSODEG00000005593	URB2	99	35.034	ENSPREG00000010268	urb2	99	34.850	Poecilia_reticulata
ENSODEG00000005593	URB2	99	75.509	ENSPPYG00000000123	URB2	99	75.575	Pongo_abelii
ENSODEG00000005593	URB2	99	76.888	ENSPCOG00000023537	URB2	99	76.888	Propithecus_coquereli
ENSODEG00000005593	URB2	100	63.134	ENSPVAG00000002108	URB2	100	63.068	Pteropus_vampyrus
ENSODEG00000005593	URB2	90	35.189	ENSPNYG00000016840	urb2	95	35.161	Pundamilia_nyererei
ENSODEG00000005593	URB2	100	37.273	ENSPNAG00000013684	urb2	100	37.143	Pygocentrus_nattereri
ENSODEG00000005593	URB2	100	73.037	ENSRNOG00000026853	Urb2	97	73.037	Rattus_norvegicus
ENSODEG00000005593	URB2	100	76.312	ENSRBIG00000037937	URB2	100	76.312	Rhinopithecus_bieti
ENSODEG00000005593	URB2	100	76.115	ENSRROG00000039854	URB2	100	76.115	Rhinopithecus_roxellana
ENSODEG00000005593	URB2	100	76.378	ENSSBOG00000023055	URB2	100	76.378	Saimiri_boliviensis_boliviensis
ENSODEG00000005593	URB2	100	61.140	ENSSHAG00000014735	URB2	100	61.140	Sarcophilus_harrisii
ENSODEG00000005593	URB2	98	40.053	ENSSFOG00015015432	urb2	98	39.961	Scleropages_formosus
ENSODEG00000005593	URB2	89	36.016	ENSSMAG00000004984	urb2	95	35.738	Scophthalmus_maximus
ENSODEG00000005593	URB2	99	35.839	ENSSDUG00000000902	urb2	99	35.839	Seriola_dumerili
ENSODEG00000005593	URB2	100	50.225	ENSSPUG00000018549	URB2	100	50.352	Sphenodon_punctatus
ENSODEG00000005593	URB2	99	36.855	ENSSPAG00000013632	urb2	99	36.975	Stegastes_partitus
ENSODEG00000005593	URB2	99	71.307	ENSSSCG00000010186	URB2	99	71.307	Sus_scrofa
ENSODEG00000005593	URB2	100	49.349	ENSTGUG00000009990	URB2	100	49.349	Taeniopygia_guttata
ENSODEG00000005593	URB2	99	34.988	ENSTRUG00000008173	urb2	99	35.227	Takifugu_rubripes
ENSODEG00000005593	URB2	99	36.701	ENSTNIG00000017689	urb2	99	36.122	Tetraodon_nigroviridis
ENSODEG00000005593	URB2	97	79.537	ENSTTRG00000014864	URB2	96	79.537	Tursiops_truncatus
ENSODEG00000005593	URB2	99	74.836	ENSUAMG00000015022	URB2	99	74.836	Ursus_americanus
ENSODEG00000005593	URB2	99	75.230	ENSUMAG00000004728	URB2	99	75.230	Ursus_maritimus
ENSODEG00000005593	URB2	63	82.857	ENSVPAG00000001750	-	63	82.857	Vicugna_pacos
ENSODEG00000005593	URB2	100	74.196	ENSVVUG00000006747	URB2	100	74.196	Vulpes_vulpes
ENSODEG00000005593	URB2	100	41.150	ENSXETG00000023331	urb2	100	41.024	Xenopus_tropicalis
ENSODEG00000005593	URB2	99	35.166	ENSXMAG00000015059	urb2	99	34.897	Xiphophorus_maculatus