EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005609 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 518 bases
Position: chrJH651649.1:7725372-7725889
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007519	SHS2_Rpb7-N	PF03876.17	8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007633	-	444	-	ENSODEP00000007519	147 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005609	-	100	72.674	ENSODEG00000002048	-	100	72.674
ENSODEG00000005609	-	89	64.744	ENSODEG00000018495	-	100	64.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005609	-	100	72.674	ENSG00000168002	POLR2G	100	80.488	Homo_sapiens
ENSODEG00000005609	-	98	70.414	ENSAPOG00000010949	polr2gl	99	70.414	Acanthochromis_polyacanthus
ENSODEG00000005609	-	100	72.674	ENSAMEG00000006386	POLR2G	100	72.674	Ailuropoda_melanoleuca
ENSODEG00000005609	-	98	70.414	ENSACIG00000007252	polr2gl	88	70.414	Amphilophus_citrinellus
ENSODEG00000005609	-	100	72.093	ENSAOCG00000013628	polr2gl	100	72.093	Amphiprion_ocellaris
ENSODEG00000005609	-	100	72.093	ENSAPEG00000011229	polr2gl	100	72.093	Amphiprion_percula
ENSODEG00000005609	-	100	72.093	ENSATEG00000013382	polr2gl	100	72.093	Anabas_testudineus
ENSODEG00000005609	-	97	71.856	ENSACAG00000001005	POLR2G	97	71.856	Anolis_carolinensis
ENSODEG00000005609	-	100	72.674	ENSANAG00000037428	POLR2G	100	72.674	Aotus_nancymaae
ENSODEG00000005609	-	100	70.930	ENSACLG00000014753	polr2gl	100	70.930	Astatotilapia_calliptera
ENSODEG00000005609	-	100	72.093	ENSAMXG00000030439	polr2gl	100	72.093	Astyanax_mexicanus
ENSODEG00000005609	-	100	72.674	ENSBTAG00000009483	POLR2G	100	72.674	Bos_taurus
ENSODEG00000005609	-	100	56.977	WBGene00021845	rpb-7	87	56.977	Caenorhabditis_elegans
ENSODEG00000005609	-	98	76.875	ENSCJAG00000018688	POLR2G	100	72.674	Callithrix_jacchus
ENSODEG00000005609	-	64	76.531	ENSCAFG00000015461	POLR2G	83	76.531	Canis_familiaris
ENSODEG00000005609	-	100	72.674	ENSCAFG00020013136	POLR2G	100	72.674	Canis_lupus_dingo
ENSODEG00000005609	-	98	72.781	ENSCHIG00000023730	POLR2G	89	72.781	Capra_hircus
ENSODEG00000005609	-	100	72.093	ENSTSYG00000011918	POLR2G	100	72.093	Carlito_syrichta
ENSODEG00000005609	-	75	70.229	ENSCAPG00000017572	POLR2G	100	70.229	Cavia_aperea
ENSODEG00000005609	-	100	72.674	ENSCPOG00000036420	POLR2G	100	72.674	Cavia_porcellus
ENSODEG00000005609	-	100	65.116	ENSCCAG00000033483	-	95	65.116	Cebus_capucinus
ENSODEG00000005609	-	100	72.674	ENSCATG00000034443	POLR2G	100	72.674	Cercocebus_atys
ENSODEG00000005609	-	100	72.674	ENSCLAG00000000802	POLR2G	100	72.674	Chinchilla_lanigera
ENSODEG00000005609	-	100	72.674	ENSCSAG00000006715	POLR2G	100	72.674	Chlorocebus_sabaeus
ENSODEG00000005609	-	73	68.421	ENSCHOG00000009928	POLR2G	100	68.421	Choloepus_hoffmanni
ENSODEG00000005609	-	100	72.093	ENSCPBG00000017972	POLR2G	100	72.093	Chrysemys_picta_bellii
ENSODEG00000005609	-	100	66.279	ENSCING00000004991	-	100	66.279	Ciona_intestinalis
ENSODEG00000005609	-	100	63.372	ENSCSAVG00000002667	-	100	63.372	Ciona_savignyi
ENSODEG00000005609	-	100	72.674	ENSCANG00000043203	POLR2G	100	72.674	Colobus_angolensis_palliatus
ENSODEG00000005609	-	100	72.674	ENSCGRG00001022692	-	100	72.674	Cricetulus_griseus_chok1gshd
ENSODEG00000005609	-	100	67.442	ENSCGRG00001011370	-	100	67.442	Cricetulus_griseus_chok1gshd
ENSODEG00000005609	-	100	72.674	ENSCGRG00000015350	Polr2g	100	72.674	Cricetulus_griseus_crigri
ENSODEG00000005609	-	97	72.024	ENSCSEG00000011991	polr2gl	90	72.024	Cynoglossus_semilaevis
ENSODEG00000005609	-	100	72.093	ENSCVAG00000021090	polr2gl	100	72.093	Cyprinodon_variegatus
ENSODEG00000005609	-	100	72.093	ENSDARG00000056127	polr2gl	100	72.093	Danio_rerio
ENSODEG00000005609	-	100	72.674	ENSDNOG00000043426	POLR2G	100	72.674	Dasypus_novemcinctus
ENSODEG00000005609	-	100	70.930	ENSDORG00000010351	-	100	70.930	Dipodomys_ordii
ENSODEG00000005609	-	100	55.629	ENSDORG00000015696	-	100	55.629	Dipodomys_ordii
ENSODEG00000005609	-	100	58.721	FBgn0051155	Rpb7	99	58.721	Drosophila_melanogaster
ENSODEG00000005609	-	100	59.884	ENSETEG00000019637	POLR2G	100	59.884	Echinops_telfairi
ENSODEG00000005609	-	100	70.930	ENSEBUG00000000439	-	86	70.930	Eptatretus_burgeri
ENSODEG00000005609	-	100	72.674	ENSEASG00005011357	POLR2G	100	72.674	Equus_asinus_asinus
ENSODEG00000005609	-	98	72.781	ENSECAG00000021465	POLR2G	87	72.781	Equus_caballus
ENSODEG00000005609	-	63	87.500	ENSEEUG00000007416	POLR2G	56	87.500	Erinaceus_europaeus
ENSODEG00000005609	-	100	72.093	ENSELUG00000003401	polr2g	100	72.093	Esox_lucius
ENSODEG00000005609	-	100	72.674	ENSFCAG00000026072	POLR2G	62	72.674	Felis_catus
ENSODEG00000005609	-	100	72.674	ENSFDAG00000020977	POLR2G	100	72.674	Fukomys_damarensis
ENSODEG00000005609	-	100	71.512	ENSFHEG00000003053	polr2gl	100	71.512	Fundulus_heteroclitus
ENSODEG00000005609	-	95	71.341	ENSGMOG00000000535	polr2gl	100	71.341	Gadus_morhua
ENSODEG00000005609	-	95	70.122	ENSGAFG00000001773	polr2gl	98	70.122	Gambusia_affinis
ENSODEG00000005609	-	100	72.093	ENSGACG00000017706	polr2gl	100	72.093	Gasterosteus_aculeatus
ENSODEG00000005609	-	97	71.429	ENSGAGG00000001303	POLR2G	100	71.429	Gopherus_agassizii
ENSODEG00000005609	-	100	72.674	ENSGGOG00000011739	POLR2G	100	72.674	Gorilla_gorilla
ENSODEG00000005609	-	98	69.231	ENSHBUG00000011421	polr2gl	93	69.231	Haplochromis_burtoni
ENSODEG00000005609	-	100	72.674	ENSHGLG00000004851	POLR2G	100	72.674	Heterocephalus_glaber_female
ENSODEG00000005609	-	100	68.605	ENSHGLG00100018441	POLR2G	100	68.605	Heterocephalus_glaber_male
ENSODEG00000005609	-	100	72.093	ENSHCOG00000009499	polr2gl	91	72.093	Hippocampus_comes
ENSODEG00000005609	-	100	72.093	ENSIPUG00000000671	polr2g	100	72.093	Ictalurus_punctatus
ENSODEG00000005609	-	100	71.512	ENSSTOG00000004391	POLR2G	100	71.512	Ictidomys_tridecemlineatus
ENSODEG00000005609	-	100	72.674	ENSJJAG00000005019	Polr2g	100	72.674	Jaculus_jaculus
ENSODEG00000005609	-	98	72.189	ENSKMAG00000011056	polr2gl	89	72.189	Kryptolebias_marmoratus
ENSODEG00000005609	-	100	72.093	ENSLBEG00000001458	polr2gl	100	72.093	Labrus_bergylta
ENSODEG00000005609	-	100	72.674	ENSLACG00000006420	POLR2G	100	72.674	Latimeria_chalumnae
ENSODEG00000005609	-	100	72.093	ENSLAFG00000004354	POLR2G	100	72.093	Loxodonta_africana
ENSODEG00000005609	-	100	72.674	ENSMFAG00000033674	POLR2G	100	72.674	Macaca_fascicularis
ENSODEG00000005609	-	100	72.674	ENSMMUG00000014368	POLR2G	100	72.674	Macaca_mulatta
ENSODEG00000005609	-	100	72.674	ENSMNEG00000041523	POLR2G	100	72.674	Macaca_nemestrina
ENSODEG00000005609	-	100	72.674	ENSMLEG00000032928	POLR2G	100	72.674	Mandrillus_leucophaeus
ENSODEG00000005609	-	95	70.732	ENSMAMG00000001188	polr2gl	100	70.732	Mastacembelus_armatus
ENSODEG00000005609	-	100	70.930	ENSMZEG00005003618	polr2gl	100	70.930	Maylandia_zebra
ENSODEG00000005609	-	61	79.570	ENSMAUG00000013079	Polr2g	99	79.570	Mesocricetus_auratus
ENSODEG00000005609	-	100	72.093	ENSMICG00000009967	POLR2G	100	72.093	Microcebus_murinus
ENSODEG00000005609	-	99	68.235	ENSMOCG00000010638	Polr2g	98	68.235	Microtus_ochrogaster
ENSODEG00000005609	-	98	72.189	ENSMMOG00000003102	polr2gl	93	72.189	Mola_mola
ENSODEG00000005609	-	100	70.349	ENSMODG00000007984	POLR2G	98	72.189	Monodelphis_domestica
ENSODEG00000005609	-	100	72.093	ENSMALG00000013385	polr2gl	100	72.093	Monopterus_albus
ENSODEG00000005609	-	100	72.674	MGP_CAROLIEiJ_G0022653	Polr2g	100	72.674	Mus_caroli
ENSODEG00000005609	-	100	72.674	ENSMUSG00000071662	Polr2g	100	72.674	Mus_musculus
ENSODEG00000005609	-	100	72.674	MGP_PahariEiJ_G0014148	Polr2g	100	72.674	Mus_pahari
ENSODEG00000005609	-	100	72.674	MGP_SPRETEiJ_G0023566	Polr2g	100	72.674	Mus_spretus
ENSODEG00000005609	-	100	72.674	ENSMPUG00000013667	POLR2G	100	72.674	Mustela_putorius_furo
ENSODEG00000005609	-	100	70.930	ENSMLUG00000003971	-	100	70.930	Myotis_lucifugus
ENSODEG00000005609	-	100	72.093	ENSMLUG00000011039	-	100	72.093	Myotis_lucifugus
ENSODEG00000005609	-	100	72.674	ENSNGAG00000020624	Polr2g	100	72.674	Nannospalax_galili
ENSODEG00000005609	-	93	67.901	ENSNBRG00000003949	polr2gl	100	67.901	Neolamprologus_brichardi
ENSODEG00000005609	-	98	59.639	ENSNLEG00000004097	-	91	59.639	Nomascus_leucogenys
ENSODEG00000005609	-	97	72.024	ENSMEUG00000011547	POLR2G	100	72.024	Notamacropus_eugenii
ENSODEG00000005609	-	100	58.140	ENSOPRG00000014769	POLR2G	100	58.140	Ochotona_princeps
ENSODEG00000005609	-	100	72.093	ENSONIG00000005183	polr2gl	100	72.093	Oreochromis_niloticus
ENSODEG00000005609	-	100	72.093	ENSOANG00000005808	POLR2G	100	72.093	Ornithorhynchus_anatinus
ENSODEG00000005609	-	100	72.674	ENSOCUG00000009485	POLR2G	100	72.674	Oryctolagus_cuniculus
ENSODEG00000005609	-	100	72.093	ENSORLG00000003154	polr2gl	100	72.093	Oryzias_latipes
ENSODEG00000005609	-	98	70.414	ENSORLG00020017682	polr2gl	99	70.414	Oryzias_latipes_hni
ENSODEG00000005609	-	100	72.093	ENSORLG00015018537	polr2gl	100	72.093	Oryzias_latipes_hsok
ENSODEG00000005609	-	100	72.093	ENSOMEG00000020086	polr2gl	100	72.093	Oryzias_melastigma
ENSODEG00000005609	-	100	64.773	ENSOGAG00000032720	POLR2G	100	64.773	Otolemur_garnettii
ENSODEG00000005609	-	98	71.176	ENSOARG00000016984	POLR2G	81	71.176	Ovis_aries
ENSODEG00000005609	-	100	72.674	ENSPPAG00000039868	POLR2G	100	72.674	Pan_paniscus
ENSODEG00000005609	-	100	72.674	ENSPPRG00000005669	POLR2G	100	72.674	Panthera_pardus
ENSODEG00000005609	-	100	69.714	ENSPTIG00000015781	POLR2G	100	69.714	Panthera_tigris_altaica
ENSODEG00000005609	-	100	72.674	ENSPANG00000025888	POLR2G	100	72.674	Papio_anubis
ENSODEG00000005609	-	99	71.930	ENSPKIG00000000902	polr2gl	90	71.006	Paramormyrops_kingsleyae
ENSODEG00000005609	-	100	72.093	ENSPSIG00000004285	POLR2G	82	72.093	Pelodiscus_sinensis
ENSODEG00000005609	-	100	72.093	ENSPMGG00000008462	polr2gl	100	72.093	Periophthalmus_magnuspinnatus
ENSODEG00000005609	-	100	72.674	ENSPEMG00000000685	Polr2g	100	72.674	Peromyscus_maniculatus_bairdii
ENSODEG00000005609	-	100	72.093	ENSPCIG00000015245	-	100	72.093	Phascolarctos_cinereus
ENSODEG00000005609	-	62	77.895	ENSPFOG00000024274	polr2gl	87	77.895	Poecilia_formosa
ENSODEG00000005609	-	98	71.598	ENSPLAG00000022848	polr2gl	95	71.598	Poecilia_latipinna
ENSODEG00000005609	-	100	71.512	ENSPMEG00000009317	polr2gl	100	71.512	Poecilia_mexicana
ENSODEG00000005609	-	100	71.512	ENSPREG00000016633	polr2gl	100	71.512	Poecilia_reticulata
ENSODEG00000005609	-	100	65.517	ENSPPYG00000003147	POLR2G	100	65.517	Pongo_abelii
ENSODEG00000005609	-	100	72.093	ENSPCAG00000016408	POLR2G	100	72.093	Procavia_capensis
ENSODEG00000005609	-	100	72.093	ENSPCOG00000024131	POLR2G	100	72.093	Propithecus_coquereli
ENSODEG00000005609	-	100	73.099	ENSPVAG00000003481	POLR2G	100	73.099	Pteropus_vampyrus
ENSODEG00000005609	-	100	70.930	ENSPNYG00000016136	polr2gl	100	70.930	Pundamilia_nyererei
ENSODEG00000005609	-	100	72.093	ENSPNAG00000025210	polr2gl	100	72.093	Pygocentrus_nattereri
ENSODEG00000005609	-	100	72.674	ENSRNOG00000019439	Polr2g	100	72.674	Rattus_norvegicus
ENSODEG00000005609	-	100	72.674	ENSRBIG00000009173	POLR2G	100	72.674	Rhinopithecus_bieti
ENSODEG00000005609	-	98	71.598	ENSRROG00000033543	POLR2G	89	55.429	Rhinopithecus_roxellana
ENSODEG00000005609	-	99	31.792	YDR404C	RPB7	100	31.792	Saccharomyces_cerevisiae
ENSODEG00000005609	-	100	72.674	ENSSBOG00000015220	POLR2G	100	72.674	Saimiri_boliviensis_boliviensis
ENSODEG00000005609	-	100	72.093	ENSSHAG00000006006	POLR2G	100	72.093	Sarcophilus_harrisii
ENSODEG00000005609	-	100	72.093	ENSSFOG00015001245	polr2g	100	72.093	Scleropages_formosus
ENSODEG00000005609	-	100	71.512	ENSSMAG00000001197	polr2gl	100	71.512	Scophthalmus_maximus
ENSODEG00000005609	-	100	72.093	ENSSDUG00000015179	polr2gl	100	72.093	Seriola_dumerili
ENSODEG00000005609	-	100	72.093	ENSSLDG00000001822	polr2gl	100	72.093	Seriola_lalandi_dorsalis
ENSODEG00000005609	-	100	72.093	ENSSPUG00000008614	POLR2G	100	72.093	Sphenodon_punctatus
ENSODEG00000005609	-	98	72.189	ENSSPAG00000015276	polr2gl	99	72.189	Stegastes_partitus
ENSODEG00000005609	-	100	72.674	ENSSSCG00000025571	POLR2G	100	72.674	Sus_scrofa
ENSODEG00000005609	-	73	66.917	ENSTGUG00000014456	POLR2G	100	66.917	Taeniopygia_guttata
ENSODEG00000005609	-	100	72.093	ENSTRUG00000002492	polr2gl	100	72.093	Takifugu_rubripes
ENSODEG00000005609	-	100	58.480	ENSTBEG00000015752	POLR2G	100	58.480	Tupaia_belangeri
ENSODEG00000005609	-	100	72.674	ENSTTRG00000002478	POLR2G	100	72.674	Tursiops_truncatus
ENSODEG00000005609	-	100	72.674	ENSUAMG00000025968	POLR2G	100	72.674	Ursus_americanus
ENSODEG00000005609	-	70	71.963	ENSUMAG00000014537	POLR2G	64	71.963	Ursus_maritimus
ENSODEG00000005609	-	74	66.923	ENSVPAG00000009534	POLR2G	100	66.923	Vicugna_pacos
ENSODEG00000005609	-	100	72.674	ENSVVUG00000029844	POLR2G	100	72.674	Vulpes_vulpes
ENSODEG00000005609	-	100	72.093	ENSXETG00000006022	polr2g	100	72.093	Xenopus_tropicalis
ENSODEG00000005609	-	98	71.598	ENSXCOG00000002005	polr2gl	93	71.598	Xiphophorus_couchianus
ENSODEG00000005609	-	98	71.598	ENSXMAG00000010063	polr2gl	93	71.598	Xiphophorus_maculatus