EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005746 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1457 bases
Position: chrJH651596.1:5076359-5077815
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007708	RRM_1	PF00076.22	1.8e-24	1	2
ENSODEP00000007708	RRM_1	PF00076.22	1.8e-24	2	2
ENSODEP00000007709	RRM_1	PF00076.22	5.2e-24	1	2
ENSODEP00000007709	RRM_1	PF00076.22	5.2e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007825	-	1005	-	ENSODEP00000007709	334 (aa)	-	-
ENSODET00000007824	-	747	-	ENSODEP00000007708	248 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005746	-	68	91.250	ENSODEG00000008757	-	92	80.968
ENSODEG00000005746	-	87	66.242	ENSODEG00000006941	-	84	50.000
ENSODEG00000005746	-	68	35.032	ENSODEG00000020231	-	57	35.366
ENSODEG00000005746	-	68	36.306	ENSODEG00000002106	-	51	37.805
ENSODEG00000005746	-	67	69.811	ENSODEG00000019611	-	60	64.796
ENSODEG00000005746	-	67	73.885	ENSODEG00000020462	-	86	56.897
ENSODEG00000005746	-	67	73.585	ENSODEG00000003755	-	58	68.041
ENSODEG00000005746	-	68	36.306	ENSODEG00000003135	-	68	37.805
ENSODEG00000005746	-	67	71.698	ENSODEG00000016578	-	64	71.698
ENSODEG00000005746	-	63	52.564	ENSODEG00000019566	HNRNPA0	63	50.568
ENSODEG00000005746	-	67	70.440	ENSODEG00000010232	-	57	65.306
ENSODEG00000005746	-	68	36.306	ENSODEG00000000376	-	57	36.585
ENSODEG00000005746	-	75	37.179	ENSODEG00000011974	MSI2	50	37.179
ENSODEG00000005746	-	86	71.626	ENSODEG00000005464	-	90	70.588
ENSODEG00000005746	-	64	40.244	ENSODEG00000001897	HNRNPD	68	37.647
ENSODEG00000005746	-	65	36.646	ENSODEG00000006830	HNRNPAB	70	36.979
ENSODEG00000005746	-	67	76.344	ENSODEG00000014815	-	84	53.636
ENSODEG00000005746	-	54	41.667	ENSODEG00000012711	-	64	37.288
ENSODEG00000005746	-	67	72.327	ENSODEG00000006322	-	61	66.327
ENSODEG00000005746	-	87	69.427	ENSODEG00000013137	-	84	52.069
ENSODEG00000005746	-	67	71.831	ENSODEG00000008615	-	62	62.500
ENSODEG00000005746	-	68	77.457	ENSODEG00000000652	-	90	77.815
ENSODEG00000005746	-	90	57.616	ENSODEG00000009329	-	84	64.726
ENSODEG00000005746	-	81	33.588	ENSODEG00000004187	-	65	37.805
ENSODEG00000005746	-	67	73.885	ENSODEG00000019306	-	86	56.897
ENSODEG00000005746	-	67	73.885	ENSODEG00000014833	-	85	56.338
ENSODEG00000005746	-	67	69.461	ENSODEG00000013694	-	86	55.219
ENSODEG00000005746	-	67	72.956	ENSODEG00000003691	-	91	55.484
ENSODEG00000005746	-	87	66.879	ENSODEG00000000671	-	85	53.103
ENSODEG00000005746	-	64	54.088	ENSODEG00000003580	-	80	46.844
ENSODEG00000005746	-	67	71.698	ENSODEG00000019156	-	88	51.829
ENSODEG00000005746	-	71	72.611	ENSODEG00000019577	-	86	55.862
ENSODEG00000005746	-	67	73.248	ENSODEG00000005110	-	70	67.526
ENSODEG00000005746	-	67	72.611	ENSODEG00000019007	-	86	56.207
ENSODEG00000005746	-	82	89.375	ENSODEG00000018537	-	92	77.460

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005746	-	96	78.682	ENSG00000122566	HNRNPA2B1	99	78.682	Homo_sapiens
ENSODEG00000005746	-	73	79.897	ENSAMEG00000005983	HNRNPA2B1	89	81.470	Ailuropoda_melanoleuca
ENSODEG00000005746	-	72	79.167	ENSAPLG00000012019	HNRNPA2B1	89	79.683	Anas_platyrhynchos
ENSODEG00000005746	-	87	71.711	ENSACAG00000012992	HNRNPA2B1	89	76.316	Anolis_carolinensis
ENSODEG00000005746	-	96	78.682	ENSANAG00000033016	HNRNPA2B1	99	78.682	Aotus_nancymaae
ENSODEG00000005746	-	68	91.250	ENSANAG00000020524	-	90	84.247	Aotus_nancymaae
ENSODEG00000005746	-	90	56.173	ENSBTAG00000011195	-	85	57.508	Bos_taurus
ENSODEG00000005746	-	86	76.587	ENSBTAG00000051697	-	90	72.400	Bos_taurus
ENSODEG00000005746	-	62	69.841	ENSBTAG00000053612	-	71	66.176	Bos_taurus
ENSODEG00000005746	-	96	59.884	ENSBTAG00000038680	-	84	60.191	Bos_taurus
ENSODEG00000005746	-	92	60.996	ENSBTAG00000054873	-	99	60.996	Bos_taurus
ENSODEG00000005746	-	87	75.000	ENSBTAG00000005726	HNRNPA2B1	92	81.270	Bos_taurus
ENSODEG00000005746	-	60	69.318	ENSBTAG00000054428	-	89	68.539	Bos_taurus
ENSODEG00000005746	-	68	91.791	ENSCJAG00000047538	-	85	73.004	Callithrix_jacchus
ENSODEG00000005746	-	96	78.682	ENSCJAG00000007908	HNRNPA2B1	99	78.682	Callithrix_jacchus
ENSODEG00000005746	-	68	92.308	ENSCAFG00000002885	HNRNPA2B1	91	85.818	Canis_familiaris
ENSODEG00000005746	-	68	91.250	ENSCAFG00020003488	HNRNPA2B1	92	81.270	Canis_lupus_dingo
ENSODEG00000005746	-	89	52.769	ENSCHIG00000011148	-	83	57.732	Capra_hircus
ENSODEG00000005746	-	68	80.667	ENSCHIG00000011000	-	88	73.841	Capra_hircus
ENSODEG00000005746	-	90	56.211	ENSCHIG00000015804	-	90	58.466	Capra_hircus
ENSODEG00000005746	-	91	58.896	ENSCHIG00000015823	-	63	67.757	Capra_hircus
ENSODEG00000005746	-	69	70.109	ENSCHIG00000008431	-	82	75.258	Capra_hircus
ENSODEG00000005746	-	68	91.250	ENSCHIG00000022444	HNRNPA2B1	92	81.270	Capra_hircus
ENSODEG00000005746	-	68	68.508	ENSCHIG00000026095	-	64	65.438	Capra_hircus
ENSODEG00000005746	-	96	77.734	ENSTSYG00000008124	HNRNPA2B1	98	77.734	Carlito_syrichta
ENSODEG00000005746	-	68	91.250	ENSCPOG00000036630	HNRNPA2B1	92	81.270	Cavia_porcellus
ENSODEG00000005746	-	96	78.295	ENSCCAG00000029074	HNRNPA2B1	99	78.295	Cebus_capucinus
ENSODEG00000005746	-	96	78.682	ENSCATG00000033325	HNRNPA2B1	99	78.682	Cercocebus_atys
ENSODEG00000005746	-	87	74.837	ENSCLAG00000014058	HNRNPA2B1	92	81.270	Chinchilla_lanigera
ENSODEG00000005746	-	85	82.500	ENSCLAG00000016182	-	89	77.931	Chinchilla_lanigera
ENSODEG00000005746	-	68	88.750	ENSCSAG00000005140	-	99	73.856	Chlorocebus_sabaeus
ENSODEG00000005746	-	72	80.311	ENSCSAG00000014175	HNRNPA2B1	89	81.470	Chlorocebus_sabaeus
ENSODEG00000005746	-	68	90.625	ENSCHOG00000013832	HNRNPA2B1	92	81.150	Choloepus_hoffmanni
ENSODEG00000005746	-	87	75.000	ENSCPBG00000022485	HNRNPA2B1	90	81.470	Chrysemys_picta_bellii
ENSODEG00000005746	-	96	78.682	ENSCANG00000028734	HNRNPA2B1	99	78.682	Colobus_angolensis_palliatus
ENSODEG00000005746	-	83	62.802	ENSCGRG00001020496	-	90	62.381	Cricetulus_griseus_chok1gshd
ENSODEG00000005746	-	87	74.837	ENSCGRG00001022416	-	92	81.270	Cricetulus_griseus_chok1gshd
ENSODEG00000005746	-	83	62.802	ENSCGRG00000010922	-	90	62.381	Cricetulus_griseus_crigri
ENSODEG00000005746	-	87	75.000	ENSCGRG00000015964	-	89	81.470	Cricetulus_griseus_crigri
ENSODEG00000005746	-	68	91.250	ENSDNOG00000046740	-	92	80.952	Dasypus_novemcinctus
ENSODEG00000005746	-	73	79.897	ENSDNOG00000012928	-	89	80.892	Dasypus_novemcinctus
ENSODEG00000005746	-	82	60.142	ENSDNOG00000043784	-	83	58.214	Dasypus_novemcinctus
ENSODEG00000005746	-	87	74.837	ENSDORG00000005482	Hnrnpa2b1	92	81.270	Dipodomys_ordii
ENSODEG00000005746	-	73	79.381	ENSETEG00000018577	HNRNPA2B1	61	85.047	Echinops_telfairi
ENSODEG00000005746	-	87	74.342	ENSEASG00005022108	HNRNPA2B1	52	80.000	Equus_asinus_asinus
ENSODEG00000005746	-	87	74.342	ENSECAG00000000782	HNRNPA2B1	52	81.270	Equus_caballus
ENSODEG00000005746	-	71	58.639	ENSEEUG00000014880	HNRNPA2B1	89	67.412	Erinaceus_europaeus
ENSODEG00000005746	-	96	79.070	ENSFCAG00000027765	HNRNPA2B1	99	79.070	Felis_catus
ENSODEG00000005746	-	89	60.435	ENSFCAG00000036293	-	93	60.699	Felis_catus
ENSODEG00000005746	-	69	80.435	ENSFALG00000009527	HNRNPA2B1	91	79.872	Ficedula_albicollis
ENSODEG00000005746	-	87	74.837	ENSFDAG00000000793	HNRNPA2B1	92	81.270	Fukomys_damarensis
ENSODEG00000005746	-	87	74.671	ENSGALG00000011036	HNRNPA2B1	91	80.192	Gallus_gallus
ENSODEG00000005746	-	87	75.000	ENSGAGG00000006799	HNRNPA2B1	90	81.470	Gopherus_agassizii
ENSODEG00000005746	-	96	78.682	ENSGGOG00000017072	HNRNPA2B1	99	78.682	Gorilla_gorilla
ENSODEG00000005746	-	87	74.837	ENSHGLG00000015396	HNRNPA2B1	92	81.270	Heterocephalus_glaber_female
ENSODEG00000005746	-	70	71.875	ENSHGLG00000010704	-	90	70.000	Heterocephalus_glaber_female
ENSODEG00000005746	-	68	91.250	ENSHGLG00100004637	HNRNPA2B1	92	81.270	Heterocephalus_glaber_male
ENSODEG00000005746	-	70	71.875	ENSHGLG00100009903	-	90	70.000	Heterocephalus_glaber_male
ENSODEG00000005746	-	87	74.510	ENSSTOG00000006202	-	92	80.317	Ictidomys_tridecemlineatus
ENSODEG00000005746	-	90	80.909	ENSSTOG00000029449	-	96	80.909	Ictidomys_tridecemlineatus
ENSODEG00000005746	-	87	69.000	ENSSTOG00000026412	-	64	76.142	Ictidomys_tridecemlineatus
ENSODEG00000005746	-	89	70.345	ENSSTOG00000024155	-	89	65.854	Ictidomys_tridecemlineatus
ENSODEG00000005746	-	65	71.875	ENSSTOG00000025552	-	88	60.345	Ictidomys_tridecemlineatus
ENSODEG00000005746	-	92	74.091	ENSSTOG00000034171	-	100	76.364	Ictidomys_tridecemlineatus
ENSODEG00000005746	-	65	73.125	ENSJJAG00000018972	-	95	70.890	Jaculus_jaculus
ENSODEG00000005746	-	87	66.775	ENSJJAG00000012306	-	91	66.452	Jaculus_jaculus
ENSODEG00000005746	-	68	78.571	ENSJJAG00000016790	-	94	73.548	Jaculus_jaculus
ENSODEG00000005746	-	92	69.880	ENSJJAG00000013880	-	97	69.880	Jaculus_jaculus
ENSODEG00000005746	-	75	77.612	ENSJJAG00000000278	-	85	80.831	Jaculus_jaculus
ENSODEG00000005746	-	87	75.000	ENSJJAG00000000423	-	85	80.831	Jaculus_jaculus
ENSODEG00000005746	-	83	71.119	ENSJJAG00000023126	-	86	67.376	Jaculus_jaculus
ENSODEG00000005746	-	83	74.729	ENSJJAG00000022256	-	87	70.819	Jaculus_jaculus
ENSODEG00000005746	-	65	81.250	ENSLACG00000013590	HNRNPA2B1	93	67.732	Latimeria_chalumnae
ENSODEG00000005746	-	68	91.250	ENSLAFG00000006902	HNRNPA2B1	89	80.831	Loxodonta_africana
ENSODEG00000005746	-	96	78.682	ENSMFAG00000002536	HNRNPA2B1	99	78.682	Macaca_fascicularis
ENSODEG00000005746	-	96	78.682	ENSMMUG00000003619	HNRNPA2B1	99	78.682	Macaca_mulatta
ENSODEG00000005746	-	96	78.682	ENSMNEG00000029148	HNRNPA2B1	99	78.682	Macaca_nemestrina
ENSODEG00000005746	-	96	78.682	ENSMLEG00000040848	HNRNPA2B1	99	78.682	Mandrillus_leucophaeus
ENSODEG00000005746	-	68	90.625	ENSMGAG00000010635	HNRNPA2B1	92	79.553	Meleagris_gallopavo
ENSODEG00000005746	-	85	73.852	ENSMAUG00000015003	-	85	71.378	Mesocricetus_auratus
ENSODEG00000005746	-	87	74.837	ENSMAUG00000005706	-	92	81.270	Mesocricetus_auratus
ENSODEG00000005746	-	96	71.429	ENSMICG00000002750	-	99	71.429	Microcebus_murinus
ENSODEG00000005746	-	96	79.070	ENSMICG00000030570	HNRNPA2B1	99	79.070	Microcebus_murinus
ENSODEG00000005746	-	87	74.837	ENSMOCG00000009258	-	92	81.270	Microtus_ochrogaster
ENSODEG00000005746	-	65	80.000	ENSMOCG00000021250	-	86	71.025	Microtus_ochrogaster
ENSODEG00000005746	-	68	91.608	ENSMODG00000000603	HNRNPA2B1	91	85.455	Monodelphis_domestica
ENSODEG00000005746	-	87	81.646	MGP_CAROLIEiJ_G0028377	Hnrnpa2b1	95	84.783	Mus_caroli
ENSODEG00000005746	-	87	74.510	ENSMUSG00000004980	Hnrnpa2b1	95	84.783	Mus_musculus
ENSODEG00000005746	-	87	74.510	MGP_PahariEiJ_G0022127	Hnrnpa2b1	95	84.783	Mus_pahari
ENSODEG00000005746	-	87	74.510	MGP_SPRETEiJ_G0029379	Hnrnpa2b1	95	84.783	Mus_spretus
ENSODEG00000005746	-	87	74.837	ENSMPUG00000017012	-	91	71.521	Mustela_putorius_furo
ENSODEG00000005746	-	73	79.897	ENSMPUG00000004554	HNRNPA2B1	89	81.470	Mustela_putorius_furo
ENSODEG00000005746	-	68	91.250	ENSMLUG00000007578	HNRNPA2B1	62	91.710	Myotis_lucifugus
ENSODEG00000005746	-	68	91.250	ENSMLUG00000028687	-	91	79.365	Myotis_lucifugus
ENSODEG00000005746	-	89	53.361	ENSNGAG00000000224	-	92	53.361	Nannospalax_galili
ENSODEG00000005746	-	65	76.250	ENSNGAG00000017486	-	89	71.111	Nannospalax_galili
ENSODEG00000005746	-	87	74.183	ENSNGAG00000015156	-	92	80.000	Nannospalax_galili
ENSODEG00000005746	-	89	61.778	ENSNGAG00000017267	-	74	61.778	Nannospalax_galili
ENSODEG00000005746	-	96	78.682	ENSNLEG00000014918	HNRNPA2B1	99	78.682	Nomascus_leucogenys
ENSODEG00000005746	-	73	66.667	ENSMEUG00000001826	-	51	63.256	Notamacropus_eugenii
ENSODEG00000005746	-	68	90.625	ENSMEUG00000001084	HNRNPA2B1	92	80.511	Notamacropus_eugenii
ENSODEG00000005746	-	68	90.000	ENSMEUG00000014479	-	70	83.796	Notamacropus_eugenii
ENSODEG00000005746	-	68	90.972	ENSOPRG00000011698	HNRNPA2B1	69	82.246	Ochotona_princeps
ENSODEG00000005746	-	68	90.625	ENSOANG00000009159	HNRNPA2B1	90	79.580	Ornithorhynchus_anatinus
ENSODEG00000005746	-	73	79.897	ENSOCUG00000026859	HNRNPA2B1	89	81.150	Oryctolagus_cuniculus
ENSODEG00000005746	-	72	80.311	ENSOGAG00000015353	HNRNPA2B1	89	81.470	Otolemur_garnettii
ENSODEG00000005746	-	90	59.333	ENSOGAG00000031950	-	61	67.368	Otolemur_garnettii
ENSODEG00000005746	-	69	70.652	ENSOARG00000008025	-	74	76.190	Ovis_aries
ENSODEG00000005746	-	87	56.113	ENSOARG00000001157	-	59	72.917	Ovis_aries
ENSODEG00000005746	-	88	60.127	ENSOARG00000004416	-	87	60.897	Ovis_aries
ENSODEG00000005746	-	75	81.250	ENSOARG00000005535	-	90	77.133	Ovis_aries
ENSODEG00000005746	-	72	80.311	ENSOARG00000010132	HNRNPA2B1	89	81.470	Ovis_aries
ENSODEG00000005746	-	68	68.306	ENSOARG00000016439	-	66	65.438	Ovis_aries
ENSODEG00000005746	-	59	64.430	ENSOARG00000013811	-	82	58.947	Ovis_aries
ENSODEG00000005746	-	68	67.760	ENSOARG00000003965	-	63	64.977	Ovis_aries
ENSODEG00000005746	-	96	78.682	ENSPPAG00000037520	HNRNPA2B1	99	78.682	Pan_paniscus
ENSODEG00000005746	-	96	79.457	ENSPPRG00000019212	HNRNPA2B1	99	79.457	Panthera_pardus
ENSODEG00000005746	-	96	79.070	ENSPTIG00000019833	HNRNPA2B1	99	79.070	Panthera_tigris_altaica
ENSODEG00000005746	-	76	59.608	ENSPTIG00000006805	-	72	70.833	Panthera_tigris_altaica
ENSODEG00000005746	-	96	78.682	ENSPTRG00000019002	HNRNPA2B1	99	78.682	Pan_troglodytes
ENSODEG00000005746	-	96	78.682	ENSPANG00000021598	HNRNPA2B1	99	78.682	Papio_anubis
ENSODEG00000005746	-	68	81.967	ENSPSIG00000002659	HNRNPA2B1	85	79.276	Pelodiscus_sinensis
ENSODEG00000005746	-	87	74.837	ENSPEMG00000014384	Hnrnpa2b1	92	81.270	Peromyscus_maniculatus_bairdii
ENSODEG00000005746	-	87	63.057	ENSPMAG00000008270	HNRNPA2B1	89	58.586	Petromyzon_marinus
ENSODEG00000005746	-	68	72.527	ENSPCIG00000013729	HNRNPA2B1	88	62.581	Phascolarctos_cinereus
ENSODEG00000005746	-	72	80.311	ENSPPYG00000017715	HNRNPA2B1	89	81.470	Pongo_abelii
ENSODEG00000005746	-	82	73.853	ENSPCOG00000026324	HNRNPA2B1	92	73.853	Propithecus_coquereli
ENSODEG00000005746	-	68	91.250	ENSPVAG00000006296	HNRNPA2B1	92	80.831	Pteropus_vampyrus
ENSODEG00000005746	-	87	74.510	ENSRNOG00000011175	Hnrnpa2b1	89	81.470	Rattus_norvegicus
ENSODEG00000005746	-	96	77.519	ENSRBIG00000015923	-	98	77.519	Rhinopithecus_bieti
ENSODEG00000005746	-	90	63.057	ENSRBIG00000039719	-	90	62.215	Rhinopithecus_bieti
ENSODEG00000005746	-	96	78.295	ENSRROG00000020443	-	99	78.295	Rhinopithecus_roxellana
ENSODEG00000005746	-	72	77.720	ENSRROG00000008368	-	88	74.593	Rhinopithecus_roxellana
ENSODEG00000005746	-	96	79.457	ENSSBOG00000005245	HNRNPA2B1	99	79.457	Saimiri_boliviensis_boliviensis
ENSODEG00000005746	-	65	90.000	ENSSHAG00000017930	HNRNPA2B1	89	78.413	Sarcophilus_harrisii
ENSODEG00000005746	-	68	91.579	ENSSARG00000007984	-	51	92.188	Sorex_araneus
ENSODEG00000005746	-	68	90.000	ENSSPUG00000015955	HNRNPA2B1	90	80.192	Sphenodon_punctatus
ENSODEG00000005746	-	86	55.068	ENSSSCG00000013611	-	55	62.295	Sus_scrofa
ENSODEG00000005746	-	87	70.227	ENSSSCG00000013607	-	89	70.227	Sus_scrofa
ENSODEG00000005746	-	83	82.222	ENSSSCG00000036350	HNRNPA2B1	91	85.818	Sus_scrofa
ENSODEG00000005746	-	68	90.000	ENSTGUG00000002869	HNRNPA2B1	90	69.805	Taeniopygia_guttata
ENSODEG00000005746	-	89	73.568	ENSTBEG00000003219	-	97	73.568	Tupaia_belangeri
ENSODEG00000005746	-	68	91.250	ENSTTRG00000000709	HNRNPA2B1	82	81.270	Tursiops_truncatus
ENSODEG00000005746	-	87	74.837	ENSUAMG00000025628	HNRNPA2B1	92	81.270	Ursus_americanus
ENSODEG00000005746	-	87	75.000	ENSUMAG00000001699	HNRNPA2B1	89	81.470	Ursus_maritimus
ENSODEG00000005746	-	70	85.625	ENSVPAG00000010417	HNRNPA2B1	92	77.955	Vicugna_pacos
ENSODEG00000005746	-	68	91.250	ENSVVUG00000000484	HNRNPA2B1	92	81.270	Vulpes_vulpes
ENSODEG00000005746	-	68	85.000	ENSXETG00000012170	hnrnpa2b1	96	69.846	Xenopus_tropicalis