EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005782 (Gene tree)
Gene ID: 101574298
Gene Symbol: MTRF1
Alias: MGC47721|MTTRF1|RF1
Full Name: mitochondrial translation release factor 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 44327 bases
Position: chrJH651637.1:788079-832405
Accession: 101574298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007752	RF-1	PF00472.20	2.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007868	MTRF1-201	1467	XM_004640260	ENSODEP00000007752	445 (aa)	XP_004640317	UPI000333CD46

Gene Model

Click here to download ENSODEG00000005782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005782	MTRF1	66	51.020	ENSODEG00000000973	MTRF1L	91	51.020

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005782	MTRF1	100	84.045	ENSG00000120662	MTRF1	100	84.045	Homo_sapiens
ENSODEG00000005782	MTRF1	78	57.759	ENSAPOG00000010181	mtrf1	86	57.759	Acanthochromis_polyacanthus
ENSODEG00000005782	MTRF1	100	81.614	ENSAMEG00000008696	MTRF1	100	81.614	Ailuropoda_melanoleuca
ENSODEG00000005782	MTRF1	54	67.782	ENSACIG00000001495	mtrf1	96	67.782	Amphilophus_citrinellus
ENSODEG00000005782	MTRF1	87	55.499	ENSAOCG00000002832	mtrf1	88	55.499	Amphiprion_ocellaris
ENSODEG00000005782	MTRF1	87	54.731	ENSAPEG00000014844	mtrf1	88	54.731	Amphiprion_percula
ENSODEG00000005782	MTRF1	76	58.187	ENSATEG00000017403	mtrf1	82	58.187	Anabas_testudineus
ENSODEG00000005782	MTRF1	99	63.554	ENSAPLG00000009317	MTRF1	99	63.554	Anas_platyrhynchos
ENSODEG00000005782	MTRF1	88	63.010	ENSACAG00000000897	MTRF1	88	63.010	Anolis_carolinensis
ENSODEG00000005782	MTRF1	100	76.286	ENSANAG00000023063	-	100	76.286	Aotus_nancymaae
ENSODEG00000005782	MTRF1	87	78.149	ENSANAG00000025310	-	97	82.645	Aotus_nancymaae
ENSODEG00000005782	MTRF1	88	56.533	ENSACLG00000023945	mtrf1	88	56.533	Astatotilapia_calliptera
ENSODEG00000005782	MTRF1	52	67.965	ENSAMXG00000031859	mtrf1	96	67.965	Astyanax_mexicanus
ENSODEG00000005782	MTRF1	100	82.998	ENSBTAG00000012260	MTRF1	100	82.998	Bos_taurus
ENSODEG00000005782	MTRF1	100	81.614	ENSCJAG00000017739	MTRF1	100	88.506	Callithrix_jacchus
ENSODEG00000005782	MTRF1	99	80.984	ENSCAFG00000004795	MTRF1	99	80.984	Canis_familiaris
ENSODEG00000005782	MTRF1	99	80.984	ENSCAFG00020018178	MTRF1	99	80.984	Canis_lupus_dingo
ENSODEG00000005782	MTRF1	100	82.287	ENSCHIG00000011810	MTRF1	100	82.287	Capra_hircus
ENSODEG00000005782	MTRF1	100	83.408	ENSTSYG00000006976	MTRF1	100	83.408	Carlito_syrichta
ENSODEG00000005782	MTRF1	97	89.352	ENSCAPG00000013163	MTRF1	100	89.352	Cavia_aperea
ENSODEG00000005782	MTRF1	100	88.565	ENSCPOG00000005264	MTRF1	100	88.565	Cavia_porcellus
ENSODEG00000005782	MTRF1	100	82.287	ENSCCAG00000035116	MTRF1	100	82.287	Cebus_capucinus
ENSODEG00000005782	MTRF1	100	83.820	ENSCATG00000009909	MTRF1	100	83.820	Cercocebus_atys
ENSODEG00000005782	MTRF1	100	90.583	ENSCLAG00000000582	MTRF1	100	90.583	Chinchilla_lanigera
ENSODEG00000005782	MTRF1	100	83.820	ENSCSAG00000017835	MTRF1	100	83.820	Chlorocebus_sabaeus
ENSODEG00000005782	MTRF1	92	73.350	ENSCHOG00000011915	-	100	73.350	Choloepus_hoffmanni
ENSODEG00000005782	MTRF1	90	67.822	ENSCPBG00000007969	MTRF1	90	67.822	Chrysemys_picta_bellii
ENSODEG00000005782	MTRF1	100	83.820	ENSCANG00000040353	MTRF1	100	83.820	Colobus_angolensis_palliatus
ENSODEG00000005782	MTRF1	100	78.475	ENSCGRG00001003065	Mtrf1	100	78.475	Cricetulus_griseus_chok1gshd
ENSODEG00000005782	MTRF1	100	78.475	ENSCGRG00000002570	Mtrf1	100	78.475	Cricetulus_griseus_crigri
ENSODEG00000005782	MTRF1	86	56.136	ENSCSEG00000005667	mtrf1	86	56.136	Cynoglossus_semilaevis
ENSODEG00000005782	MTRF1	88	54.430	ENSCVAG00000021729	mtrf1	91	54.430	Cyprinodon_variegatus
ENSODEG00000005782	MTRF1	53	59.402	ENSDARG00000033579	mtrf1	99	59.402	Danio_rerio
ENSODEG00000005782	MTRF1	100	81.250	ENSDNOG00000034196	MTRF1	100	89.677	Dasypus_novemcinctus
ENSODEG00000005782	MTRF1	99	82.022	ENSDORG00000016429	Mtrf1	100	82.022	Dipodomys_ordii
ENSODEG00000005782	MTRF1	100	78.523	ENSETEG00000014811	MTRF1	100	78.523	Echinops_telfairi
ENSODEG00000005782	MTRF1	53	57.265	ENSEBUG00000000778	mtrf1	96	57.265	Eptatretus_burgeri
ENSODEG00000005782	MTRF1	100	83.408	ENSEASG00005015715	MTRF1	100	83.408	Equus_asinus_asinus
ENSODEG00000005782	MTRF1	100	82.287	ENSECAG00000014389	MTRF1	97	82.287	Equus_caballus
ENSODEG00000005782	MTRF1	100	60.850	ENSEEUG00000004450	-	100	61.745	Erinaceus_europaeus
ENSODEG00000005782	MTRF1	86	53.543	ENSELUG00000006544	mtrf1	88	53.543	Esox_lucius
ENSODEG00000005782	MTRF1	100	79.821	ENSFCAG00000031635	MTRF1	100	79.821	Felis_catus
ENSODEG00000005782	MTRF1	90	65.163	ENSFALG00000008036	MTRF1	99	65.163	Ficedula_albicollis
ENSODEG00000005782	MTRF1	100	86.099	ENSFDAG00000017881	MTRF1	100	86.099	Fukomys_damarensis
ENSODEG00000005782	MTRF1	86	53.525	ENSFHEG00000019043	mtrf1	88	53.525	Fundulus_heteroclitus
ENSODEG00000005782	MTRF1	84	53.175	ENSGMOG00000008608	mtrf1	99	53.175	Gadus_morhua
ENSODEG00000005782	MTRF1	98	62.222	ENSGALG00000016951	MTRF1	98	62.222	Gallus_gallus
ENSODEG00000005782	MTRF1	85	55.000	ENSGAFG00000007093	mtrf1	86	55.000	Gambusia_affinis
ENSODEG00000005782	MTRF1	84	56.533	ENSGACG00000013728	mtrf1	98	56.533	Gasterosteus_aculeatus
ENSODEG00000005782	MTRF1	70	73.955	ENSGAGG00000025696	MTRF1	99	73.955	Gopherus_agassizii
ENSODEG00000005782	MTRF1	100	83.820	ENSGGOG00000002529	MTRF1	100	83.820	Gorilla_gorilla
ENSODEG00000005782	MTRF1	100	87.444	ENSHGLG00000003210	MTRF1	100	87.444	Heterocephalus_glaber_female
ENSODEG00000005782	MTRF1	100	87.444	ENSHGLG00100011843	MTRF1	100	87.444	Heterocephalus_glaber_male
ENSODEG00000005782	MTRF1	87	54.522	ENSHCOG00000009449	mtrf1	88	54.522	Hippocampus_comes
ENSODEG00000005782	MTRF1	100	83.184	ENSSTOG00000021682	MTRF1	100	83.184	Ictidomys_tridecemlineatus
ENSODEG00000005782	MTRF1	100	81.166	ENSJJAG00000017590	Mtrf1	100	81.166	Jaculus_jaculus
ENSODEG00000005782	MTRF1	86	55.325	ENSKMAG00000003231	mtrf1	85	55.325	Kryptolebias_marmoratus
ENSODEG00000005782	MTRF1	52	66.810	ENSLBEG00000023151	mtrf1	93	66.810	Labrus_bergylta
ENSODEG00000005782	MTRF1	52	66.810	ENSLBEG00000027169	-	93	66.810	Labrus_bergylta
ENSODEG00000005782	MTRF1	98	59.955	ENSLACG00000010582	MTRF1	99	60.403	Latimeria_chalumnae
ENSODEG00000005782	MTRF1	89	56.853	ENSLOCG00000005937	MTRF1	88	56.853	Lepisosteus_oculatus
ENSODEG00000005782	MTRF1	99	67.421	ENSLAFG00000030499	-	99	67.421	Loxodonta_africana
ENSODEG00000005782	MTRF1	100	80.717	ENSLAFG00000022177	-	100	80.717	Loxodonta_africana
ENSODEG00000005782	MTRF1	100	83.820	ENSMFAG00000037972	MTRF1	100	83.820	Macaca_fascicularis
ENSODEG00000005782	MTRF1	100	84.045	ENSMNEG00000035487	MTRF1	100	84.045	Macaca_nemestrina
ENSODEG00000005782	MTRF1	100	83.820	ENSMLEG00000033582	MTRF1	100	83.820	Mandrillus_leucophaeus
ENSODEG00000005782	MTRF1	83	57.796	ENSMAMG00000022048	mtrf1	83	57.796	Mastacembelus_armatus
ENSODEG00000005782	MTRF1	88	56.533	ENSMZEG00005017922	mtrf1	88	56.533	Maylandia_zebra
ENSODEG00000005782	MTRF1	87	68.638	ENSMGAG00000014971	MTRF1	93	68.638	Meleagris_gallopavo
ENSODEG00000005782	MTRF1	100	79.821	ENSMAUG00000011661	Mtrf1	100	79.821	Mesocricetus_auratus
ENSODEG00000005782	MTRF1	100	83.596	ENSMICG00000033131	MTRF1	100	83.596	Microcebus_murinus
ENSODEG00000005782	MTRF1	100	77.130	ENSMOCG00000011945	Mtrf1	100	77.130	Microtus_ochrogaster
ENSODEG00000005782	MTRF1	51	59.825	ENSMMOG00000013394	mtrf1	94	59.825	Mola_mola
ENSODEG00000005782	MTRF1	100	71.141	ENSMODG00000014772	MTRF1	100	71.141	Monodelphis_domestica
ENSODEG00000005782	MTRF1	89	54.660	ENSMALG00000013274	mtrf1	90	54.660	Monopterus_albus
ENSODEG00000005782	MTRF1	100	78.027	MGP_CAROLIEiJ_G0019539	Mtrf1	99	78.027	Mus_caroli
ENSODEG00000005782	MTRF1	100	78.700	ENSMUSG00000022022	Mtrf1	100	78.700	Mus_musculus
ENSODEG00000005782	MTRF1	100	77.528	MGP_PahariEiJ_G0030557	Mtrf1	100	77.528	Mus_pahari
ENSODEG00000005782	MTRF1	100	77.803	MGP_SPRETEiJ_G0020435	Mtrf1	100	77.803	Mus_spretus
ENSODEG00000005782	MTRF1	99	81.081	ENSMPUG00000001874	MTRF1	99	81.081	Mustela_putorius_furo
ENSODEG00000005782	MTRF1	100	81.839	ENSMLUG00000017237	MTRF1	100	81.839	Myotis_lucifugus
ENSODEG00000005782	MTRF1	100	83.184	ENSNGAG00000014460	Mtrf1	100	83.184	Nannospalax_galili
ENSODEG00000005782	MTRF1	53	67.227	ENSNBRG00000004634	mtrf1	100	67.227	Neolamprologus_brichardi
ENSODEG00000005782	MTRF1	100	83.820	ENSNLEG00000001236	MTRF1	100	83.820	Nomascus_leucogenys
ENSODEG00000005782	MTRF1	99	64.719	ENSMEUG00000001846	MTRF1	99	64.719	Notamacropus_eugenii
ENSODEG00000005782	MTRF1	74	52.888	ENSOPRG00000006450	-	100	52.888	Ochotona_princeps
ENSODEG00000005782	MTRF1	87	57.069	ENSONIG00000012476	mtrf1	100	57.069	Oreochromis_niloticus
ENSODEG00000005782	MTRF1	70	70.701	ENSOANG00000003383	-	99	70.701	Ornithorhynchus_anatinus
ENSODEG00000005782	MTRF1	100	82.063	ENSOCUG00000025207	MTRF1	100	82.063	Oryctolagus_cuniculus
ENSODEG00000005782	MTRF1	85	56.545	ENSORLG00000003225	mtrf1	87	56.545	Oryzias_latipes
ENSODEG00000005782	MTRF1	87	56.186	ENSORLG00020021048	mtrf1	88	56.186	Oryzias_latipes_hni
ENSODEG00000005782	MTRF1	85	56.283	ENSORLG00015020957	mtrf1	87	56.283	Oryzias_latipes_hsok
ENSODEG00000005782	MTRF1	85	57.105	ENSOMEG00000002022	mtrf1	87	57.105	Oryzias_melastigma
ENSODEG00000005782	MTRF1	73	78.221	ENSOGAG00000026411	-	100	78.221	Otolemur_garnettii
ENSODEG00000005782	MTRF1	100	78.700	ENSOGAG00000009719	-	100	78.700	Otolemur_garnettii
ENSODEG00000005782	MTRF1	100	82.287	ENSOARG00000006994	MTRF1	100	82.287	Ovis_aries
ENSODEG00000005782	MTRF1	100	84.045	ENSPPAG00000000050	MTRF1	100	84.045	Pan_paniscus
ENSODEG00000005782	MTRF1	100	80.269	ENSPPRG00000009511	MTRF1	100	80.269	Panthera_pardus
ENSODEG00000005782	MTRF1	100	80.269	ENSPTIG00000006673	MTRF1	100	80.269	Panthera_tigris_altaica
ENSODEG00000005782	MTRF1	100	84.045	ENSPTRG00000005815	MTRF1	100	84.045	Pan_troglodytes
ENSODEG00000005782	MTRF1	100	84.045	ENSPANG00000010809	MTRF1	100	84.045	Papio_anubis
ENSODEG00000005782	MTRF1	85	55.409	ENSPKIG00000015711	mtrf1	89	55.409	Paramormyrops_kingsleyae
ENSODEG00000005782	MTRF1	90	66.584	ENSPSIG00000004773	MTRF1	99	62.084	Pelodiscus_sinensis
ENSODEG00000005782	MTRF1	53	67.373	ENSPMGG00000006724	mtrf1	96	67.373	Periophthalmus_magnuspinnatus
ENSODEG00000005782	MTRF1	100	80.537	ENSPEMG00000020982	Mtrf1	100	80.537	Peromyscus_maniculatus_bairdii
ENSODEG00000005782	MTRF1	76	51.445	ENSPMAG00000009849	mtrf1	99	51.445	Petromyzon_marinus
ENSODEG00000005782	MTRF1	99	70.495	ENSPCIG00000012940	MTRF1	99	70.495	Phascolarctos_cinereus
ENSODEG00000005782	MTRF1	85	54.737	ENSPFOG00000000254	mtrf1	87	54.737	Poecilia_formosa
ENSODEG00000005782	MTRF1	85	55.263	ENSPLAG00000014280	mtrf1	87	55.263	Poecilia_latipinna
ENSODEG00000005782	MTRF1	85	54.737	ENSPMEG00000023245	mtrf1	87	54.737	Poecilia_mexicana
ENSODEG00000005782	MTRF1	52	62.661	ENSPREG00000018619	mtrf1	96	62.661	Poecilia_reticulata
ENSODEG00000005782	MTRF1	100	82.697	ENSPPYG00000005313	MTRF1	100	82.697	Pongo_abelii
ENSODEG00000005782	MTRF1	100	85.202	ENSPCOG00000018133	MTRF1	100	85.202	Propithecus_coquereli
ENSODEG00000005782	MTRF1	100	82.287	ENSPVAG00000008573	MTRF1	100	82.287	Pteropus_vampyrus
ENSODEG00000005782	MTRF1	54	68.201	ENSPNYG00000004357	mtrf1	96	68.201	Pundamilia_nyererei
ENSODEG00000005782	MTRF1	92	50.469	ENSPNAG00000010682	mtrf1	97	50.469	Pygocentrus_nattereri
ENSODEG00000005782	MTRF1	100	78.076	ENSRNOG00000047106	Mtrf1	93	93.805	Rattus_norvegicus
ENSODEG00000005782	MTRF1	100	83.820	ENSRBIG00000007069	MTRF1	100	83.820	Rhinopithecus_bieti
ENSODEG00000005782	MTRF1	100	83.820	ENSRROG00000035345	MTRF1	100	83.820	Rhinopithecus_roxellana
ENSODEG00000005782	MTRF1	85	86.508	ENSSBOG00000004572	MTRF1	100	86.508	Saimiri_boliviensis_boliviensis
ENSODEG00000005782	MTRF1	92	70.803	ENSSHAG00000018109	MTRF1	100	70.803	Sarcophilus_harrisii
ENSODEG00000005782	MTRF1	86	56.771	ENSSFOG00015006191	mtrf1	87	56.771	Scleropages_formosus
ENSODEG00000005782	MTRF1	86	56.136	ENSSMAG00000015740	mtrf1	86	56.136	Scophthalmus_maximus
ENSODEG00000005782	MTRF1	87	56.154	ENSSDUG00000022608	mtrf1	76	56.154	Seriola_dumerili
ENSODEG00000005782	MTRF1	87	56.154	ENSSLDG00000013584	mtrf1	76	56.154	Seriola_lalandi_dorsalis
ENSODEG00000005782	MTRF1	100	78.202	ENSSARG00000002306	MTRF1	100	78.202	Sorex_araneus
ENSODEG00000005782	MTRF1	54	72.385	ENSSPUG00000007354	MTRF1	99	72.385	Sphenodon_punctatus
ENSODEG00000005782	MTRF1	86	55.699	ENSSPAG00000000881	mtrf1	87	55.699	Stegastes_partitus
ENSODEG00000005782	MTRF1	100	81.614	ENSSSCG00000009436	MTRF1	100	81.614	Sus_scrofa
ENSODEG00000005782	MTRF1	88	66.071	ENSTGUG00000012422	MTRF1	94	66.071	Taeniopygia_guttata
ENSODEG00000005782	MTRF1	87	56.154	ENSTRUG00000000396	mtrf1	86	56.154	Takifugu_rubripes
ENSODEG00000005782	MTRF1	83	57.453	ENSTNIG00000017149	-	98	57.143	Tetraodon_nigroviridis
ENSODEG00000005782	MTRF1	54	77.824	ENSTBEG00000004696	-	100	77.824	Tupaia_belangeri
ENSODEG00000005782	MTRF1	100	84.305	ENSTTRG00000010370	MTRF1	100	84.305	Tursiops_truncatus
ENSODEG00000005782	MTRF1	100	82.287	ENSUMAG00000014772	MTRF1	100	82.287	Ursus_maritimus
ENSODEG00000005782	MTRF1	100	82.550	ENSVPAG00000002565	MTRF1	100	82.550	Vicugna_pacos
ENSODEG00000005782	MTRF1	99	81.081	ENSVVUG00000028755	MTRF1	99	81.081	Vulpes_vulpes
ENSODEG00000005782	MTRF1	84	67.647	ENSXETG00000018904	mtrf1	97	67.647	Xenopus_tropicalis
ENSODEG00000005782	MTRF1	52	61.638	ENSXCOG00000020386	mtrf1	95	61.638	Xiphophorus_couchianus
ENSODEG00000005782	MTRF1	85	53.947	ENSXMAG00000009853	mtrf1	86	53.947	Xiphophorus_maculatus