EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005892 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pre-mRNA-splicing factor SLU7 pseudogene
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1753 bases
Position: chrJH651626.1:2342301-2344053
Accession: 101563043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007902	Slu7	PF11708.8	1.5e-87	1	1
ENSODEP00000007903	Slu7	PF11708.8	2.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008024	-	1659	-	ENSODEP00000007902	552 (aa)	-	-
ENSODET00000008025	-	681	-	ENSODEP00000007903	226 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005892	-	97	97.260	ENSODEG00000010998	-	100	90.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005892	-	97	94.064	ENSG00000164609	SLU7	100	93.069	Homo_sapiens
ENSODEG00000005892	-	84	85.263	ENSAPOG00000011660	slu7	98	71.053	Acanthochromis_polyacanthus
ENSODEG00000005892	-	97	94.977	ENSAMEG00000006613	SLU7	100	87.031	Ailuropoda_melanoleuca
ENSODEG00000005892	-	87	83.838	ENSACIG00000005652	slu7	99	71.864	Amphilophus_citrinellus
ENSODEG00000005892	-	84	84.737	ENSAPEG00000018095	slu7	98	70.351	Amphiprion_percula
ENSODEG00000005892	-	86	84.694	ENSATEG00000006357	slu7	99	70.209	Anabas_testudineus
ENSODEG00000005892	-	96	84.332	ENSAPLG00000008133	SLU7	98	78.299	Anas_platyrhynchos
ENSODEG00000005892	-	97	83.562	ENSACAG00000003144	SLU7	98	79.058	Anolis_carolinensis
ENSODEG00000005892	-	97	94.064	ENSANAG00000028320	SLU7	100	86.177	Aotus_nancymaae
ENSODEG00000005892	-	84	85.263	ENSACLG00000007273	slu7	98	69.019	Astatotilapia_calliptera
ENSODEG00000005892	-	87	82.653	ENSAMXG00000002404	slu7	97	71.790	Astyanax_mexicanus
ENSODEG00000005892	-	97	95.434	ENSBTAG00000008457	SLU7	100	87.031	Bos_taurus
ENSODEG00000005892	-	78	49.153	WBGene00010629	K07C5.6	61	45.476	Caenorhabditis_elegans
ENSODEG00000005892	-	97	94.064	ENSCJAG00000019132	SLU7	100	86.986	Callithrix_jacchus
ENSODEG00000005892	-	97	94.977	ENSCAFG00000017268	SLU7	93	87.031	Canis_familiaris
ENSODEG00000005892	-	97	94.977	ENSCAFG00020001456	SLU7	93	87.031	Canis_lupus_dingo
ENSODEG00000005892	-	97	95.434	ENSCHIG00000013793	SLU7	100	87.201	Capra_hircus
ENSODEG00000005892	-	97	92.694	ENSTSYG00000000157	SLU7	100	86.007	Carlito_syrichta
ENSODEG00000005892	-	97	95.434	ENSCAPG00000015711	SLU7	100	86.014	Cavia_aperea
ENSODEG00000005892	-	97	95.890	ENSCPOG00000004484	SLU7	100	87.543	Cavia_porcellus
ENSODEG00000005892	-	97	93.607	ENSCCAG00000035808	SLU7	99	86.007	Cebus_capucinus
ENSODEG00000005892	-	97	94.064	ENSCATG00000026140	SLU7	100	86.177	Cercocebus_atys
ENSODEG00000005892	-	97	96.804	ENSCLAG00000011915	SLU7	100	88.225	Chinchilla_lanigera
ENSODEG00000005892	-	97	94.064	ENSCSAG00000010383	SLU7	99	86.299	Chlorocebus_sabaeus
ENSODEG00000005892	-	100	77.226	ENSCHOG00000005055	SLU7	100	77.226	Choloepus_hoffmanni
ENSODEG00000005892	-	97	84.018	ENSCPBG00000008047	SLU7	98	79.791	Chrysemys_picta_bellii
ENSODEG00000005892	-	81	71.038	ENSCING00000008595	zf(cchc)-12	71	63.146	Ciona_intestinalis
ENSODEG00000005892	-	69	48.193	ENSCSAVG00000004927	-	100	48.077	Ciona_savignyi
ENSODEG00000005892	-	97	94.064	ENSCANG00000003257	SLU7	100	86.348	Colobus_angolensis_palliatus
ENSODEG00000005892	-	97	93.607	ENSCGRG00001016416	Slu7	100	85.983	Cricetulus_griseus_chok1gshd
ENSODEG00000005892	-	99	66.726	ENSCGRG00001022223	-	96	67.096	Cricetulus_griseus_chok1gshd
ENSODEG00000005892	-	97	92.694	ENSCGRG00000005164	Slu7	100	85.641	Cricetulus_griseus_crigri
ENSODEG00000005892	-	99	67.023	ENSCGRG00000008655	-	96	67.279	Cricetulus_griseus_crigri
ENSODEG00000005892	-	84	83.684	ENSCSEG00000015522	slu7	98	68.246	Cynoglossus_semilaevis
ENSODEG00000005892	-	89	83.582	ENSCVAG00000019302	slu7	98	71.818	Cyprinodon_variegatus
ENSODEG00000005892	-	88	83.500	ENSDARG00000038870	slu7	90	71.605	Danio_rerio
ENSODEG00000005892	-	97	93.607	ENSDNOG00000048745	SLU7	100	86.130	Dasypus_novemcinctus
ENSODEG00000005892	-	79	93.296	ENSDORG00000025365	-	99	70.974	Dipodomys_ordii
ENSODEG00000005892	-	90	73.039	ENSDORG00000024886	-	100	73.039	Dipodomys_ordii
ENSODEG00000005892	-	97	94.064	ENSDORG00000006239	-	99	79.329	Dipodomys_ordii
ENSODEG00000005892	-	96	50.450	FBgn0039626	Slu7	72	52.088	Drosophila_melanogaster
ENSODEG00000005892	-	89	77.723	ENSETEG00000002993	-	100	61.538	Echinops_telfairi
ENSODEG00000005892	-	90	84.820	ENSETEG00000014798	-	100	84.630	Echinops_telfairi
ENSODEG00000005892	-	90	70.443	ENSEBUG00000003656	slu7	87	59.043	Eptatretus_burgeri
ENSODEG00000005892	-	97	94.521	ENSEASG00005000613	SLU7	100	86.201	Equus_asinus_asinus
ENSODEG00000005892	-	97	94.521	ENSECAG00000013696	SLU7	100	86.689	Equus_caballus
ENSODEG00000005892	-	60	90.741	ENSEEUG00000006300	-	59	90.741	Erinaceus_europaeus
ENSODEG00000005892	-	98	75.566	ENSELUG00000022607	slu7	97	67.250	Esox_lucius
ENSODEG00000005892	-	97	94.977	ENSFCAG00000011152	SLU7	100	87.372	Felis_catus
ENSODEG00000005892	-	93	81.043	ENSFALG00000014860	-	96	80.000	Ficedula_albicollis
ENSODEG00000005892	-	97	84.932	ENSFALG00000013473	-	98	78.883	Ficedula_albicollis
ENSODEG00000005892	-	97	95.890	ENSFDAG00000003906	SLU7	100	88.205	Fukomys_damarensis
ENSODEG00000005892	-	91	83.495	ENSFHEG00000012789	slu7	98	72.464	Fundulus_heteroclitus
ENSODEG00000005892	-	84	79.474	ENSGMOG00000016207	slu7	98	63.441	Gadus_morhua
ENSODEG00000005892	-	96	86.574	ENSGALG00000034414	SLU7	85	80.105	Gallus_gallus
ENSODEG00000005892	-	92	81.250	ENSGAFG00000007953	slu7	97	71.327	Gambusia_affinis
ENSODEG00000005892	-	89	79.208	ENSGACG00000018144	slu7	98	64.716	Gasterosteus_aculeatus
ENSODEG00000005892	-	97	84.475	ENSGAGG00000008256	SLU7	98	79.965	Gopherus_agassizii
ENSODEG00000005892	-	97	94.064	ENSGGOG00000005591	SLU7	100	86.348	Gorilla_gorilla
ENSODEG00000005892	-	84	85.263	ENSHBUG00000002296	slu7	90	78.571	Haplochromis_burtoni
ENSODEG00000005892	-	97	95.890	ENSHGLG00000009442	-	100	88.205	Heterocephalus_glaber_female
ENSODEG00000005892	-	97	74.429	ENSHGLG00000008195	-	90	74.359	Heterocephalus_glaber_female
ENSODEG00000005892	-	97	74.886	ENSHGLG00100011540	-	94	74.886	Heterocephalus_glaber_male
ENSODEG00000005892	-	97	95.890	ENSHGLG00100008080	-	100	88.205	Heterocephalus_glaber_male
ENSODEG00000005892	-	84	84.211	ENSHCOG00000003110	slu7	98	70.107	Hippocampus_comes
ENSODEG00000005892	-	97	71.846	ENSIPUG00000017949	slu7	98	71.127	Ictalurus_punctatus
ENSODEG00000005892	-	79	80.802	ENSSTOG00000015057	SLU7	98	81.224	Ictidomys_tridecemlineatus
ENSODEG00000005892	-	97	94.977	ENSJJAG00000011452	Slu7	100	86.325	Jaculus_jaculus
ENSODEG00000005892	-	90	81.373	ENSKMAG00000005625	slu7	97	71.636	Kryptolebias_marmoratus
ENSODEG00000005892	-	84	86.842	ENSLBEG00000004903	slu7	98	69.244	Labrus_bergylta
ENSODEG00000005892	-	97	82.192	ENSLACG00000010170	SLU7	97	75.528	Latimeria_chalumnae
ENSODEG00000005892	-	88	83.500	ENSLOCG00000009410	slu7	98	73.322	Lepisosteus_oculatus
ENSODEG00000005892	-	97	93.151	ENSLAFG00000003725	SLU7	100	85.616	Loxodonta_africana
ENSODEG00000005892	-	97	94.064	ENSMFAG00000002001	SLU7	100	86.348	Macaca_fascicularis
ENSODEG00000005892	-	95	93.488	ENSMMUG00000023075	SLU7	100	84.130	Macaca_mulatta
ENSODEG00000005892	-	97	94.064	ENSMNEG00000029132	SLU7	100	86.348	Macaca_nemestrina
ENSODEG00000005892	-	97	94.064	ENSMLEG00000037647	SLU7	100	86.177	Mandrillus_leucophaeus
ENSODEG00000005892	-	84	84.737	ENSMAMG00000008387	slu7	98	69.324	Mastacembelus_armatus
ENSODEG00000005892	-	97	72.395	ENSMZEG00005012180	slu7	98	72.395	Maylandia_zebra
ENSODEG00000005892	-	96	85.648	ENSMGAG00000002882	SLU7	98	79.232	Meleagris_gallopavo
ENSODEG00000005892	-	97	94.521	ENSMAUG00000016739	Slu7	100	85.324	Mesocricetus_auratus
ENSODEG00000005892	-	92	94.203	ENSMICG00000031781	SLU7	98	85.714	Microcebus_murinus
ENSODEG00000005892	-	97	94.977	ENSMOCG00000012963	Slu7	100	86.667	Microtus_ochrogaster
ENSODEG00000005892	-	87	83.163	ENSMMOG00000004203	slu7	97	69.841	Mola_mola
ENSODEG00000005892	-	64	80.282	ENSMMOG00000005988	-	75	80.282	Mola_mola
ENSODEG00000005892	-	97	89.498	ENSMODG00000007968	SLU7	95	83.419	Monodelphis_domestica
ENSODEG00000005892	-	90	78.922	ENSMALG00000004247	slu7	98	68.486	Monopterus_albus
ENSODEG00000005892	-	97	93.151	MGP_CAROLIEiJ_G0016222	Slu7	100	86.325	Mus_caroli
ENSODEG00000005892	-	97	93.607	ENSMUSG00000020409	Slu7	100	85.812	Mus_musculus
ENSODEG00000005892	-	97	93.151	MGP_PahariEiJ_G0017358	Slu7	100	86.325	Mus_pahari
ENSODEG00000005892	-	97	93.607	MGP_SPRETEiJ_G0017063	Slu7	100	86.496	Mus_spretus
ENSODEG00000005892	-	97	94.977	ENSMPUG00000013264	SLU7	93	87.201	Mustela_putorius_furo
ENSODEG00000005892	-	97	94.064	ENSMLUG00000003091	SLU7	100	86.689	Myotis_lucifugus
ENSODEG00000005892	-	97	94.977	ENSNGAG00000015167	Slu7	100	87.350	Nannospalax_galili
ENSODEG00000005892	-	97	94.064	ENSNLEG00000004355	SLU7	100	86.519	Nomascus_leucogenys
ENSODEG00000005892	-	97	89.954	ENSMEUG00000010577	SLU7	86	91.525	Notamacropus_eugenii
ENSODEG00000005892	-	97	93.151	ENSOPRG00000004538	SLU7	99	79.387	Ochotona_princeps
ENSODEG00000005892	-	84	86.316	ENSONIG00000012957	slu7	98	71.178	Oreochromis_niloticus
ENSODEG00000005892	-	63	75.654	ENSOANG00000012329	-	99	74.541	Ornithorhynchus_anatinus
ENSODEG00000005892	-	97	88.584	ENSOANG00000008090	-	99	89.362	Ornithorhynchus_anatinus
ENSODEG00000005892	-	97	94.977	ENSOCUG00000011743	SLU7	99	85.445	Oryctolagus_cuniculus
ENSODEG00000005892	-	92	81.643	ENSORLG00000005505	slu7	95	71.076	Oryzias_latipes
ENSODEG00000005892	-	89	83.582	ENSORLG00020011665	slu7	97	70.899	Oryzias_latipes_hni
ENSODEG00000005892	-	92	81.159	ENSORLG00015002040	slu7	97	71.076	Oryzias_latipes_hsok
ENSODEG00000005892	-	84	85.789	ENSOMEG00000006235	slu7	97	70.475	Oryzias_melastigma
ENSODEG00000005892	-	97	94.521	ENSOGAG00000012301	SLU7	100	86.348	Otolemur_garnettii
ENSODEG00000005892	-	97	94.977	ENSOARG00000013468	SLU7	100	86.689	Ovis_aries
ENSODEG00000005892	-	97	94.064	ENSPPAG00000032717	SLU7	100	86.348	Pan_paniscus
ENSODEG00000005892	-	97	94.521	ENSPPRG00000013856	SLU7	100	87.201	Panthera_pardus
ENSODEG00000005892	-	97	94.521	ENSPTIG00000005434	SLU7	100	87.201	Panthera_tigris_altaica
ENSODEG00000005892	-	97	94.064	ENSPTRG00000017491	SLU7	100	86.177	Pan_troglodytes
ENSODEG00000005892	-	97	94.064	ENSPANG00000006850	SLU7	100	85.983	Papio_anubis
ENSODEG00000005892	-	97	76.712	ENSPKIG00000009367	slu7	98	71.429	Paramormyrops_kingsleyae
ENSODEG00000005892	-	97	83.562	ENSPSIG00000011216	SLU7	98	77.855	Pelodiscus_sinensis
ENSODEG00000005892	-	90	80.882	ENSPMGG00000015695	slu7	96	69.328	Periophthalmus_magnuspinnatus
ENSODEG00000005892	-	97	94.977	ENSPEMG00000016646	-	100	87.009	Peromyscus_maniculatus_bairdii
ENSODEG00000005892	-	95	83.721	ENSPEMG00000000564	-	98	75.963	Peromyscus_maniculatus_bairdii
ENSODEG00000005892	-	97	89.954	ENSPCIG00000018111	SLU7	99	86.498	Phascolarctos_cinereus
ENSODEG00000005892	-	84	86.316	ENSPFOG00000009050	slu7	98	70.000	Poecilia_formosa
ENSODEG00000005892	-	84	86.316	ENSPLAG00000005330	slu7	98	69.877	Poecilia_latipinna
ENSODEG00000005892	-	84	86.316	ENSPMEG00000024369	slu7	98	71.020	Poecilia_mexicana
ENSODEG00000005892	-	84	86.842	ENSPREG00000004355	slu7	98	70.463	Poecilia_reticulata
ENSODEG00000005892	-	97	94.064	ENSPPYG00000016008	SLU7	100	86.348	Pongo_abelii
ENSODEG00000005892	-	76	96.154	ENSPCAG00000003323	SLU7	85	96.154	Procavia_capensis
ENSODEG00000005892	-	100	82.082	ENSPCOG00000016138	SLU7	100	82.253	Propithecus_coquereli
ENSODEG00000005892	-	81	93.519	ENSPVAG00000015935	SLU7	82	93.519	Pteropus_vampyrus
ENSODEG00000005892	-	95	76.744	ENSPNYG00000004141	-	89	78.537	Pundamilia_nyererei
ENSODEG00000005892	-	93	58.106	ENSPNYG00000024087	-	97	57.118	Pundamilia_nyererei
ENSODEG00000005892	-	97	72.395	ENSPNYG00000000289	slu7	98	70.939	Pundamilia_nyererei
ENSODEG00000005892	-	97	73.132	ENSPNAG00000006885	slu7	98	72.456	Pygocentrus_nattereri
ENSODEG00000005892	-	97	93.607	ENSRNOG00000003822	Slu7	100	86.995	Rattus_norvegicus
ENSODEG00000005892	-	97	94.064	ENSRBIG00000021391	SLU7	100	84.300	Rhinopithecus_bieti
ENSODEG00000005892	-	97	94.064	ENSRROG00000008930	SLU7	100	86.348	Rhinopithecus_roxellana
ENSODEG00000005892	-	97	94.521	ENSSBOG00000003225	SLU7	100	86.348	Saimiri_boliviensis_boliviensis
ENSODEG00000005892	-	93	82.857	ENSSHAG00000007807	-	98	75.218	Sarcophilus_harrisii
ENSODEG00000005892	-	97	89.498	ENSSHAG00000009841	-	100	82.906	Sarcophilus_harrisii
ENSODEG00000005892	-	97	72.051	ENSSFOG00015015923	slu7	97	72.583	Scleropages_formosus
ENSODEG00000005892	-	87	82.323	ENSSMAG00000004281	slu7	98	68.166	Scophthalmus_maximus
ENSODEG00000005892	-	84	85.789	ENSSDUG00000005127	slu7	98	69.474	Seriola_dumerili
ENSODEG00000005892	-	84	86.316	ENSSLDG00000014353	slu7	98	69.825	Seriola_lalandi_dorsalis
ENSODEG00000005892	-	98	69.459	ENSSARG00000012209	-	100	70.085	Sorex_araneus
ENSODEG00000005892	-	92	85.646	ENSSARG00000014137	-	99	77.098	Sorex_araneus
ENSODEG00000005892	-	92	86.603	ENSSARG00000014139	-	99	76.748	Sorex_araneus
ENSODEG00000005892	-	92	86.603	ENSSARG00000001869	-	99	75.175	Sorex_araneus
ENSODEG00000005892	-	92	85.646	ENSSARG00000006902	-	99	76.573	Sorex_araneus
ENSODEG00000005892	-	92	85.167	ENSSARG00000006390	-	99	81.446	Sorex_araneus
ENSODEG00000005892	-	90	86.207	ENSSARG00000014128	-	100	77.754	Sorex_araneus
ENSODEG00000005892	-	58	69.209	ENSSARG00000006540	-	100	68.169	Sorex_araneus
ENSODEG00000005892	-	92	84.689	ENSSARG00000014506	-	99	76.173	Sorex_araneus
ENSODEG00000005892	-	97	82.648	ENSSPUG00000000666	SLU7	98	77.855	Sphenodon_punctatus
ENSODEG00000005892	-	84	85.789	ENSSPAG00000014100	slu7	96	70.475	Stegastes_partitus
ENSODEG00000005892	-	97	93.607	ENSSSCG00000017033	SLU7	100	86.519	Sus_scrofa
ENSODEG00000005892	-	97	84.475	ENSTGUG00000001410	SLU7	98	79.058	Taeniopygia_guttata
ENSODEG00000005892	-	84	83.684	ENSTRUG00000001335	slu7	98	69.643	Takifugu_rubripes
ENSODEG00000005892	-	84	85.263	ENSTNIG00000009677	slu7	100	68.375	Tetraodon_nigroviridis
ENSODEG00000005892	-	100	72.821	ENSTBEG00000015604	SLU7	99	72.821	Tupaia_belangeri
ENSODEG00000005892	-	90	84.470	ENSTTRG00000011575	SLU7	100	84.848	Tursiops_truncatus
ENSODEG00000005892	-	97	94.977	ENSUMAG00000000110	SLU7	92	87.031	Ursus_maritimus
ENSODEG00000005892	-	97	94.064	ENSVPAG00000009595	SLU7	100	85.445	Vicugna_pacos
ENSODEG00000005892	-	97	94.977	ENSVVUG00000003989	SLU7	93	87.201	Vulpes_vulpes
ENSODEG00000005892	-	92	80.383	ENSXETG00000016536	slu7	98	73.509	Xenopus_tropicalis
ENSODEG00000005892	-	84	86.842	ENSXCOG00000004207	slu7	98	70.841	Xiphophorus_couchianus
ENSODEG00000005892	-	84	86.842	ENSXMAG00000009007	slu7	98	70.351	Xiphophorus_maculatus