EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005934 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 17848 bases
Position: chrJH651530.1:5843021-5860868
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007960	MA3	PF02847.17	1.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008082	-	1830	-	ENSODEP00000007960	609 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005934	-	90	81.756	ENSODEG00000007673	CWC22	92	81.756

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005934	-	83	89.407	ENSG00000163510	CWC22	73	89.574	Homo_sapiens
ENSODEG00000005934	-	72	76.790	ENSAPOG00000004200	cwc22	53	76.790	Acanthochromis_polyacanthus
ENSODEG00000005934	-	83	89.619	ENSAMEG00000011004	CWC22	60	89.979	Ailuropoda_melanoleuca
ENSODEG00000005934	-	72	79.614	ENSACIG00000020055	cwc22	53	80.043	Amphilophus_citrinellus
ENSODEG00000005934	-	82	83.191	ENSACAG00000009438	CWC22	60	83.227	Anolis_carolinensis
ENSODEG00000005934	-	83	89.619	ENSANAG00000028324	CWC22	59	89.787	Aotus_nancymaae
ENSODEG00000005934	-	72	78.587	ENSACLG00000025447	cwc22	67	79.015	Astatotilapia_calliptera
ENSODEG00000005934	-	83	89.407	ENSBTAG00000021726	CWC22	59	89.765	Bos_taurus
ENSODEG00000005934	-	69	50.218	WBGene00002957	let-858	51	50.881	Caenorhabditis_elegans
ENSODEG00000005934	-	83	89.831	ENSCAFG00000014160	CWC22	59	90.192	Canis_familiaris
ENSODEG00000005934	-	83	91.910	ENSCAFG00020007223	CWC22	66	96.930	Canis_lupus_dingo
ENSODEG00000005934	-	83	89.407	ENSCHIG00000017150	CWC22	59	89.765	Capra_hircus
ENSODEG00000005934	-	72	82.276	ENSTSYG00000026635	-	53	82.418	Carlito_syrichta
ENSODEG00000005934	-	72	80.380	ENSTSYG00000035591	-	57	80.508	Carlito_syrichta
ENSODEG00000005934	-	83	89.619	ENSTSYG00000000218	-	59	89.787	Carlito_syrichta
ENSODEG00000005934	-	72	76.907	ENSTSYG00000028686	-	53	75.532	Carlito_syrichta
ENSODEG00000005934	-	72	83.582	ENSCAPG00000002064	CWC22	54	83.582	Cavia_aperea
ENSODEG00000005934	-	82	90.192	ENSCPOG00000007492	CWC22	59	90.192	Cavia_porcellus
ENSODEG00000005934	-	83	81.992	ENSCCAG00000021239	CWC22	58	82.128	Cebus_capucinus
ENSODEG00000005934	-	83	89.619	ENSCATG00000035788	CWC22	59	89.787	Cercocebus_atys
ENSODEG00000005934	-	82	95.312	ENSCLAG00000011118	CWC22	59	95.312	Chinchilla_lanigera
ENSODEG00000005934	-	83	89.619	ENSCSAG00000012925	CWC22	59	89.787	Chlorocebus_sabaeus
ENSODEG00000005934	-	83	89.195	ENSCHOG00000006362	CWC22	60	89.362	Choloepus_hoffmanni
ENSODEG00000005934	-	83	85.129	ENSCPBG00000001765	CWC22	60	85.161	Chrysemys_picta_bellii
ENSODEG00000005934	-	70	62.473	ENSCING00000008865	-	60	62.553	Ciona_intestinalis
ENSODEG00000005934	-	72	61.853	ENSCSAVG00000003537	-	83	68.037	Ciona_savignyi
ENSODEG00000005934	-	83	89.619	ENSCANG00000013762	CWC22	59	89.787	Colobus_angolensis_palliatus
ENSODEG00000005934	-	83	89.286	ENSCGRG00001017005	-	75	89.809	Cricetulus_griseus_chok1gshd
ENSODEG00000005934	-	83	89.286	ENSCGRG00000001934	-	60	89.809	Cricetulus_griseus_crigri
ENSODEG00000005934	-	72	68.590	ENSCSEG00000005257	cwc22	51	69.444	Cynoglossus_semilaevis
ENSODEG00000005934	-	84	89.195	ENSDNOG00000003020	-	59	89.362	Dasypus_novemcinctus
ENSODEG00000005934	-	72	70.940	ENSDNOG00000032640	-	66	71.030	Dasypus_novemcinctus
ENSODEG00000005934	-	81	90.042	ENSDORG00000011483	-	58	90.213	Dipodomys_ordii
ENSODEG00000005934	-	83	80.952	ENSETEG00000013355	CWC22	75	76.056	Echinops_telfairi
ENSODEG00000005934	-	83	89.619	ENSEASG00005022287	CWC22	59	89.979	Equus_asinus_asinus
ENSODEG00000005934	-	83	89.619	ENSECAG00000010769	CWC22	59	89.979	Equus_caballus
ENSODEG00000005934	-	72	79.025	ENSELUG00000010536	cwc22	77	74.274	Esox_lucius
ENSODEG00000005934	-	83	89.831	ENSFCAG00000018982	CWC22	59	90.192	Felis_catus
ENSODEG00000005934	-	81	83.691	ENSFALG00000003495	CWC22	58	83.691	Ficedula_albicollis
ENSODEG00000005934	-	82	90.987	ENSFDAG00000010857	CWC22	59	90.987	Fukomys_damarensis
ENSODEG00000005934	-	72	77.350	ENSGMOG00000009084	cwc22	75	78.419	Gadus_morhua
ENSODEG00000005934	-	72	84.301	ENSGALG00000009001	CWC22	57	84.335	Gallus_gallus
ENSODEG00000005934	-	72	77.849	ENSGAFG00000021155	cwc22	56	78.541	Gambusia_affinis
ENSODEG00000005934	-	72	77.825	ENSGACG00000002071	cwc22	57	78.326	Gasterosteus_aculeatus
ENSODEG00000005934	-	83	85.065	ENSGAGG00000013471	CWC22	60	84.549	Gopherus_agassizii
ENSODEG00000005934	-	83	89.407	ENSGGOG00000012484	CWC22	59	89.574	Gorilla_gorilla
ENSODEG00000005934	-	68	79.148	ENSHBUG00000010504	cwc22	51	79.596	Haplochromis_burtoni
ENSODEG00000005934	-	83	90.405	ENSHGLG00000005692	CWC22	60	90.405	Heterocephalus_glaber_female
ENSODEG00000005934	-	83	90.405	ENSHGLG00100016497	CWC22	78	86.780	Heterocephalus_glaber_male
ENSODEG00000005934	-	72	77.849	ENSHCOG00000004206	cwc22	56	78.326	Hippocampus_comes
ENSODEG00000005934	-	72	81.330	ENSIPUG00000005831	cwc22	50	81.330	Ictalurus_punctatus
ENSODEG00000005934	-	83	90.625	ENSSTOG00000009788	CWC22	59	90.625	Ictidomys_tridecemlineatus
ENSODEG00000005934	-	83	89.852	ENSJJAG00000017012	-	59	90.000	Jaculus_jaculus
ENSODEG00000005934	-	72	78.112	ENSLBEG00000020518	cwc22	54	74.836	Labrus_bergylta
ENSODEG00000005934	-	83	88.795	ENSLAFG00000014802	CWC22	59	88.960	Loxodonta_africana
ENSODEG00000005934	-	82	89.787	ENSMFAG00000000590	CWC22	63	89.787	Macaca_fascicularis
ENSODEG00000005934	-	77	89.787	ENSMMUG00000020642	CWC22	60	89.787	Macaca_mulatta
ENSODEG00000005934	-	82	89.787	ENSMNEG00000034567	CWC22	59	89.787	Macaca_nemestrina
ENSODEG00000005934	-	83	89.619	ENSMLEG00000042344	CWC22	59	89.787	Mandrillus_leucophaeus
ENSODEG00000005934	-	72	84.301	ENSMGAG00000009220	CWC22	52	84.335	Meleagris_gallopavo
ENSODEG00000005934	-	73	89.076	ENSMAUG00000016154	-	62	89.597	Mesocricetus_auratus
ENSODEG00000005934	-	83	89.641	ENSMICG00000016919	CWC22	60	89.809	Microcebus_murinus
ENSODEG00000005934	-	72	74.249	ENSMMOG00000019720	cwc22	67	75.322	Mola_mola
ENSODEG00000005934	-	69	83.678	ENSMODG00000003711	-	82	83.678	Monodelphis_domestica
ENSODEG00000005934	-	82	87.607	ENSMODG00000010233	-	58	87.607	Monodelphis_domestica
ENSODEG00000005934	-	70	83.982	ENSMODG00000020117	-	82	83.982	Monodelphis_domestica
ENSODEG00000005934	-	83	89.076	MGP_CAROLIEiJ_G0023696	-	74	89.597	Mus_caroli
ENSODEG00000005934	-	83	87.318	ENSMUSG00000094336	Gm13693	68	86.573	Mus_musculus
ENSODEG00000005934	-	83	87.318	ENSMUSG00000096729	Gm13695	68	86.573	Mus_musculus
ENSODEG00000005934	-	83	87.318	ENSMUSG00000094125	Gm13698	68	86.573	Mus_musculus
ENSODEG00000005934	-	83	87.318	ENSMUSG00000095824	Gm13697	68	86.573	Mus_musculus
ENSODEG00000005934	-	83	89.076	ENSMUSG00000027014	Cwc22	75	89.597	Mus_musculus
ENSODEG00000005934	-	83	87.318	ENSMUSG00000079247	Gm13691	68	86.573	Mus_musculus
ENSODEG00000005934	-	83	87.318	ENSMUSG00000096337	Gm13694	68	86.573	Mus_musculus
ENSODEG00000005934	-	83	87.318	ENSMUSG00000096484	Gm13696	68	86.573	Mus_musculus
ENSODEG00000005934	-	83	89.286	MGP_PahariEiJ_G0025147	-	74	89.809	Mus_pahari
ENSODEG00000005934	-	83	89.831	ENSMPUG00000002432	CWC22	59	90.192	Mustela_putorius_furo
ENSODEG00000005934	-	72	89.979	ENSMLUG00000013437	-	56	89.979	Myotis_lucifugus
ENSODEG00000005934	-	82	88.273	ENSMLUG00000024966	-	67	88.273	Myotis_lucifugus
ENSODEG00000005934	-	72	88.434	ENSNGAG00000013881	-	74	86.480	Nannospalax_galili
ENSODEG00000005934	-	83	89.619	ENSNLEG00000006248	CWC22	59	89.787	Nomascus_leucogenys
ENSODEG00000005934	-	68	82.207	ENSMEUG00000011026	CWC22	79	82.207	Notamacropus_eugenii
ENSODEG00000005934	-	82	89.149	ENSOPRG00000007844	CWC22	66	89.149	Ochotona_princeps
ENSODEG00000005934	-	82	85.288	ENSOANG00000008649	CWC22	61	85.470	Ornithorhynchus_anatinus
ENSODEG00000005934	-	74	78.826	ENSORLG00020015117	cwc22	51	78.675	Oryzias_latipes_hni
ENSODEG00000005934	-	72	79.266	ENSOMEG00000015199	cwc22	50	79.914	Oryzias_melastigma
ENSODEG00000005934	-	82	88.771	ENSOGAG00000015287	CWC22	58	88.936	Otolemur_garnettii
ENSODEG00000005934	-	83	89.619	ENSOARG00000016905	CWC22	59	89.979	Ovis_aries
ENSODEG00000005934	-	81	89.195	ENSPPAG00000027833	CWC22	58	89.362	Pan_paniscus
ENSODEG00000005934	-	83	89.831	ENSPPRG00000001389	CWC22	59	90.192	Panthera_pardus
ENSODEG00000005934	-	83	89.831	ENSPTIG00000019139	CWC22	59	90.192	Panthera_tigris_altaica
ENSODEG00000005934	-	83	89.407	ENSPTRG00000012698	CWC22	59	89.574	Pan_troglodytes
ENSODEG00000005934	-	83	89.619	ENSPANG00000018976	CWC22	59	89.787	Papio_anubis
ENSODEG00000005934	-	72	79.149	ENSPKIG00000021346	cwc22	55	75.847	Paramormyrops_kingsleyae
ENSODEG00000005934	-	72	85.376	ENSPSIG00000008632	CWC22	58	85.376	Pelodiscus_sinensis
ENSODEG00000005934	-	73	84.842	ENSPEMG00000023936	-	67	85.106	Peromyscus_maniculatus_bairdii
ENSODEG00000005934	-	71	77.201	ENSPMAG00000005914	cwc22	55	76.008	Petromyzon_marinus
ENSODEG00000005934	-	82	87.393	ENSPCIG00000009903	-	73	87.393	Phascolarctos_cinereus
ENSODEG00000005934	-	72	78.541	ENSPFOG00000015025	cwc22	62	78.511	Poecilia_formosa
ENSODEG00000005934	-	72	76.957	ENSPREG00000004312	cwc22	54	77.657	Poecilia_reticulata
ENSODEG00000005934	-	83	89.407	ENSPPYG00000012986	CWC22	59	89.574	Pongo_abelii
ENSODEG00000005934	-	81	87.712	ENSPCAG00000011882	CWC22	59	88.060	Procavia_capensis
ENSODEG00000005934	-	71	89.062	ENSPCOG00000010195	CWC22	57	89.062	Propithecus_coquereli
ENSODEG00000005934	-	81	90.021	ENSPVAG00000011497	CWC22	57	90.385	Pteropus_vampyrus
ENSODEG00000005934	-	72	78.587	ENSPNYG00000010435	cwc22	68	79.015	Pundamilia_nyererei
ENSODEG00000005934	-	81	89.845	ENSRNOG00000038322	LOC500684	57	90.402	Rattus_norvegicus
ENSODEG00000005934	-	81	90.949	ENSRNOG00000012651	Cwc22	58	91.518	Rattus_norvegicus
ENSODEG00000005934	-	82	84.746	ENSRBIG00000036751	CWC22	58	85.185	Rhinopithecus_bieti
ENSODEG00000005934	-	83	89.619	ENSRROG00000037520	CWC22	59	89.787	Rhinopithecus_roxellana
ENSODEG00000005934	-	66	31.807	YGR278W	-	70	31.566	Saccharomyces_cerevisiae
ENSODEG00000005934	-	82	85.381	ENSSBOG00000021683	CWC22	58	85.532	Saimiri_boliviensis_boliviensis
ENSODEG00000005934	-	72	74.893	ENSSHAG00000004040	-	65	74.893	Sarcophilus_harrisii
ENSODEG00000005934	-	72	86.809	ENSSHAG00000016596	-	53	87.234	Sarcophilus_harrisii
ENSODEG00000005934	-	72	78.194	ENSSFOG00015010559	cwc22	57	79.121	Scleropages_formosus
ENSODEG00000005934	-	72	75.053	ENSSMAG00000004724	cwc22	50	72.782	Scophthalmus_maximus
ENSODEG00000005934	-	72	78.326	ENSSLDG00000023157	cwc22	67	78.755	Seriola_lalandi_dorsalis
ENSODEG00000005934	-	74	93.750	ENSSARG00000013596	-	51	93.750	Sorex_araneus
ENSODEG00000005934	-	71	80.346	ENSSPUG00000006395	CWC22	54	80.086	Sphenodon_punctatus
ENSODEG00000005934	-	83	89.619	ENSSSCG00000016008	CWC22	59	89.979	Sus_scrofa
ENSODEG00000005934	-	72	83.120	ENSTGUG00000009340	-	54	83.120	Taeniopygia_guttata
ENSODEG00000005934	-	72	76.596	ENSTRUG00000014411	cwc22	50	77.944	Takifugu_rubripes
ENSODEG00000005934	-	72	74.947	ENSTNIG00000005074	cwc22	62	75.000	Tetraodon_nigroviridis
ENSODEG00000005934	-	72	70.763	ENSTBEG00000014539	CWC22	52	70.851	Tupaia_belangeri
ENSODEG00000005934	-	83	88.889	ENSTTRG00000012142	CWC22	59	89.126	Tursiops_truncatus
ENSODEG00000005934	-	83	89.831	ENSUAMG00000010342	CWC22	59	90.192	Ursus_americanus
ENSODEG00000005934	-	83	89.831	ENSUMAG00000016730	CWC22	59	90.192	Ursus_maritimus
ENSODEG00000005934	-	83	89.195	ENSVPAG00000008565	CWC22	59	89.552	Vicugna_pacos
ENSODEG00000005934	-	83	89.831	ENSVVUG00000009738	CWC22	59	90.192	Vulpes_vulpes
ENSODEG00000005934	-	72	82.090	ENSXETG00000014099	cwc22	61	82.766	Xenopus_tropicalis