EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005979 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1360 bases
Position: chrJH651555.1:16938571-16939930
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008027	CSD	PF00313.22	1.4e-24	1	2
ENSODEP00000008027	CSD	PF00313.22	1.4e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008150	-	1131	-	ENSODEP00000008027	376 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005979	-	98	68.363	ENSODEG00000007383	-	98	68.363

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005979	-	98	67.699	ENSG00000009307	CSDE1	98	67.699	Homo_sapiens
ENSODEG00000005979	-	98	52.980	ENSAPOG00000015538	csde1	97	52.516	Acanthochromis_polyacanthus
ENSODEG00000005979	-	98	67.257	ENSAMEG00000017129	CSDE1	91	67.257	Ailuropoda_melanoleuca
ENSODEG00000005979	-	71	59.910	ENSACIG00000015175	csde1	98	59.910	Amphilophus_citrinellus
ENSODEG00000005979	-	98	52.980	ENSAOCG00000011510	csde1	96	52.980	Amphiprion_ocellaris
ENSODEG00000005979	-	98	52.980	ENSAPEG00000007194	csde1	97	52.980	Amphiprion_percula
ENSODEG00000005979	-	98	52.434	ENSATEG00000003864	csde1	96	52.434	Anabas_testudineus
ENSODEG00000005979	-	98	60.398	ENSAPLG00000008797	CSDE1	96	60.398	Anas_platyrhynchos
ENSODEG00000005979	-	98	61.726	ENSACAG00000003120	CSDE1	97	61.726	Anolis_carolinensis
ENSODEG00000005979	-	98	67.478	ENSANAG00000024665	CSDE1	92	67.478	Aotus_nancymaae
ENSODEG00000005979	-	98	52.097	ENSACLG00000013296	csde1	97	52.097	Astatotilapia_calliptera
ENSODEG00000005979	-	98	51.322	ENSAMXG00000007436	csde1	97	51.322	Astyanax_mexicanus
ENSODEG00000005979	-	98	67.920	ENSBTAG00000000678	CSDE1	96	67.920	Bos_taurus
ENSODEG00000005979	-	98	67.478	ENSCJAG00000012565	CSDE1	94	65.063	Callithrix_jacchus
ENSODEG00000005979	-	94	67.048	ENSCAFG00000009618	CSDE1	91	67.048	Canis_familiaris
ENSODEG00000005979	-	98	67.478	ENSCAFG00020000481	CSDE1	96	67.478	Canis_lupus_dingo
ENSODEG00000005979	-	98	67.920	ENSCHIG00000017250	CSDE1	96	67.920	Capra_hircus
ENSODEG00000005979	-	98	67.699	ENSTSYG00000003747	CSDE1	100	67.699	Carlito_syrichta
ENSODEG00000005979	-	98	65.757	ENSCAPG00000015128	CSDE1	81	65.757	Cavia_aperea
ENSODEG00000005979	-	98	68.363	ENSCPOG00000040388	CSDE1	97	68.363	Cavia_porcellus
ENSODEG00000005979	-	99	55.083	ENSCCAG00000030878	-	92	55.083	Cebus_capucinus
ENSODEG00000005979	-	98	67.478	ENSCCAG00000036794	CSDE1	100	67.478	Cebus_capucinus
ENSODEG00000005979	-	90	54.589	ENSCCAG00000033677	-	99	54.589	Cebus_capucinus
ENSODEG00000005979	-	98	67.699	ENSCATG00000036962	CSDE1	98	66.981	Cercocebus_atys
ENSODEG00000005979	-	98	68.363	ENSCLAG00000006618	CSDE1	97	68.363	Chinchilla_lanigera
ENSODEG00000005979	-	98	67.699	ENSCSAG00000001658	CSDE1	91	67.699	Chlorocebus_sabaeus
ENSODEG00000005979	-	98	76.871	ENSCHOG00000000918	CSDE1	74	48.551	Choloepus_hoffmanni
ENSODEG00000005979	-	98	61.947	ENSCPBG00000016547	CSDE1	97	61.947	Chrysemys_picta_bellii
ENSODEG00000005979	-	95	32.812	ENSCING00000014465	-	94	32.489	Ciona_intestinalis
ENSODEG00000005979	-	93	32.743	ENSCSAVG00000008100	-	97	32.743	Ciona_savignyi
ENSODEG00000005979	-	98	67.699	ENSCANG00000035096	CSDE1	98	66.981	Colobus_angolensis_palliatus
ENSODEG00000005979	-	98	56.190	ENSCANG00000031069	-	89	77.358	Colobus_angolensis_palliatus
ENSODEG00000005979	-	98	67.699	ENSCGRG00001016833	-	97	67.699	Cricetulus_griseus_chok1gshd
ENSODEG00000005979	-	98	57.859	ENSCGRG00001014011	-	85	57.859	Cricetulus_griseus_chok1gshd
ENSODEG00000005979	-	98	57.859	ENSCGRG00000005831	-	90	57.859	Cricetulus_griseus_crigri
ENSODEG00000005979	-	98	67.699	ENSCGRG00000002225	-	100	67.699	Cricetulus_griseus_crigri
ENSODEG00000005979	-	98	52.539	ENSCSEG00000002620	csde1	96	52.539	Cynoglossus_semilaevis
ENSODEG00000005979	-	98	52.097	ENSCVAG00000001344	csde1	97	51.641	Cyprinodon_variegatus
ENSODEG00000005979	-	98	52.759	ENSDARG00000074758	csde1	98	59.914	Danio_rerio
ENSODEG00000005979	-	98	67.478	ENSDNOG00000010287	-	90	67.478	Dasypus_novemcinctus
ENSODEG00000005979	-	98	67.478	ENSDORG00000011609	Csde1	98	67.478	Dipodomys_ordii
ENSODEG00000005979	-	93	35.032	FBgn0263352	Unr	72	35.862	Drosophila_melanogaster
ENSODEG00000005979	-	98	52.125	ENSETEG00000013678	-	58	52.125	Echinops_telfairi
ENSODEG00000005979	-	68	55.836	ENSETEG00000006280	-	96	55.836	Echinops_telfairi
ENSODEG00000005979	-	98	49.548	ENSETEG00000007109	-	73	49.548	Echinops_telfairi
ENSODEG00000005979	-	97	40.741	ENSEBUG00000008647	csde1	98	40.741	Eptatretus_burgeri
ENSODEG00000005979	-	98	68.142	ENSEASG00005006284	CSDE1	97	68.142	Equus_asinus_asinus
ENSODEG00000005979	-	98	68.142	ENSECAG00000020885	CSDE1	97	68.142	Equus_caballus
ENSODEG00000005979	-	82	49.738	ENSEEUG00000006286	CSDE1	51	47.644	Erinaceus_europaeus
ENSODEG00000005979	-	98	53.483	ENSELUG00000015507	csde1	96	53.483	Esox_lucius
ENSODEG00000005979	-	98	67.920	ENSFCAG00000029266	CSDE1	96	67.920	Felis_catus
ENSODEG00000005979	-	98	60.619	ENSFALG00000003407	CSDE1	97	60.619	Ficedula_albicollis
ENSODEG00000005979	-	98	67.699	ENSFDAG00000007882	CSDE1	98	67.699	Fukomys_damarensis
ENSODEG00000005979	-	98	52.097	ENSFHEG00000010799	csde1	97	52.097	Fundulus_heteroclitus
ENSODEG00000005979	-	97	51.885	ENSGMOG00000012731	csde1	96	51.885	Gadus_morhua
ENSODEG00000005979	-	94	59.862	ENSGALG00000002139	CSDE1	95	59.862	Gallus_gallus
ENSODEG00000005979	-	73	51.327	ENSGAFG00000005241	csde1	91	51.327	Gambusia_affinis
ENSODEG00000005979	-	97	52.772	ENSGACG00000004544	csde1	96	52.772	Gasterosteus_aculeatus
ENSODEG00000005979	-	98	61.504	ENSGAGG00000017685	CSDE1	97	61.504	Gopherus_agassizii
ENSODEG00000005979	-	98	67.699	ENSGGOG00000002164	CSDE1	96	67.699	Gorilla_gorilla
ENSODEG00000005979	-	98	52.097	ENSHBUG00000020315	csde1	96	52.097	Haplochromis_burtoni
ENSODEG00000005979	-	97	57.110	ENSHGLG00000000650	-	88	57.110	Heterocephalus_glaber_female
ENSODEG00000005979	-	98	66.125	ENSHGLG00000003829	-	96	66.125	Heterocephalus_glaber_female
ENSODEG00000005979	-	98	61.504	ENSHGLG00000008555	-	86	61.504	Heterocephalus_glaber_female
ENSODEG00000005979	-	98	58.782	ENSHGLG00000009620	-	96	58.782	Heterocephalus_glaber_female
ENSODEG00000005979	-	99	59.685	ENSHGLG00000007471	-	96	59.685	Heterocephalus_glaber_female
ENSODEG00000005979	-	98	66.898	ENSHGLG00000010039	-	100	66.898	Heterocephalus_glaber_female
ENSODEG00000005979	-	98	56.858	ENSHGLG00000019549	-	87	56.858	Heterocephalus_glaber_female
ENSODEG00000005979	-	85	57.711	ENSHGLG00100004195	-	85	57.711	Heterocephalus_glaber_male
ENSODEG00000005979	-	98	63.341	ENSHGLG00100012072	-	98	63.341	Heterocephalus_glaber_male
ENSODEG00000005979	-	98	66.667	ENSHGLG00100006910	-	100	66.667	Heterocephalus_glaber_male
ENSODEG00000005979	-	97	56.422	ENSHGLG00100002245	-	96	56.422	Heterocephalus_glaber_male
ENSODEG00000005979	-	98	67.920	ENSHGLG00100019438	-	97	67.920	Heterocephalus_glaber_male
ENSODEG00000005979	-	98	56.858	ENSHGLG00100001846	-	97	56.858	Heterocephalus_glaber_male
ENSODEG00000005979	-	98	65.403	ENSHGLG00100004833	-	100	65.403	Heterocephalus_glaber_male
ENSODEG00000005979	-	99	62.181	ENSHGLG00100007287	-	96	62.181	Heterocephalus_glaber_male
ENSODEG00000005979	-	98	51.214	ENSHCOG00000004158	csde1	97	50.993	Hippocampus_comes
ENSODEG00000005979	-	98	52.423	ENSIPUG00000000355	csde1	97	52.423	Ictalurus_punctatus
ENSODEG00000005979	-	98	56.098	ENSSTOG00000030994	-	95	56.098	Ictidomys_tridecemlineatus
ENSODEG00000005979	-	74	48.649	ENSSTOG00000032722	-	93	48.649	Ictidomys_tridecemlineatus
ENSODEG00000005979	-	98	67.478	ENSJJAG00000019571	Csde1	98	67.478	Jaculus_jaculus
ENSODEG00000005979	-	98	52.796	ENSKMAG00000005685	csde1	97	51.193	Kryptolebias_marmoratus
ENSODEG00000005979	-	98	52.097	ENSLBEG00000014770	csde1	97	52.097	Labrus_bergylta
ENSODEG00000005979	-	98	52.288	ENSLACG00000018452	CSDE1	91	52.288	Latimeria_chalumnae
ENSODEG00000005979	-	98	54.425	ENSLOCG00000010413	csde1	91	54.425	Lepisosteus_oculatus
ENSODEG00000005979	-	98	65.929	ENSLAFG00000007150	CSDE1	93	65.929	Loxodonta_africana
ENSODEG00000005979	-	98	67.699	ENSMFAG00000003674	CSDE1	98	66.981	Macaca_fascicularis
ENSODEG00000005979	-	98	67.699	ENSMMUG00000001974	CSDE1	96	67.699	Macaca_mulatta
ENSODEG00000005979	-	98	67.699	ENSMNEG00000045247	CSDE1	98	66.981	Macaca_nemestrina
ENSODEG00000005979	-	98	67.257	ENSMLEG00000038673	CSDE1	91	67.257	Mandrillus_leucophaeus
ENSODEG00000005979	-	98	52.097	ENSMAMG00000008821	csde1	96	52.097	Mastacembelus_armatus
ENSODEG00000005979	-	98	52.097	ENSMZEG00005021675	csde1	96	52.097	Maylandia_zebra
ENSODEG00000005979	-	98	60.044	ENSMGAG00000016381	CSDE1	96	60.044	Meleagris_gallopavo
ENSODEG00000005979	-	98	67.699	ENSMAUG00000014031	Csde1	98	67.699	Mesocricetus_auratus
ENSODEG00000005979	-	98	67.699	ENSMICG00000002050	CSDE1	99	67.627	Microcebus_murinus
ENSODEG00000005979	-	98	67.699	ENSMOCG00000018960	Csde1	97	67.699	Microtus_ochrogaster
ENSODEG00000005979	-	98	52.318	ENSMMOG00000015075	csde1	96	52.318	Mola_mola
ENSODEG00000005979	-	98	65.487	ENSMODG00000004685	CSDE1	97	65.487	Monodelphis_domestica
ENSODEG00000005979	-	98	52.759	ENSMALG00000007132	csde1	96	52.759	Monopterus_albus
ENSODEG00000005979	-	98	67.699	MGP_CAROLIEiJ_G0025444	Csde1	97	67.699	Mus_caroli
ENSODEG00000005979	-	98	67.920	ENSMUSG00000068823	Csde1	98	67.920	Mus_musculus
ENSODEG00000005979	-	98	67.920	MGP_PahariEiJ_G0026888	Csde1	97	67.920	Mus_pahari
ENSODEG00000005979	-	98	67.920	MGP_SPRETEiJ_G0026394	Csde1	97	67.920	Mus_spretus
ENSODEG00000005979	-	94	67.506	ENSMPUG00000005753	CSDE1	96	67.506	Mustela_putorius_furo
ENSODEG00000005979	-	98	67.699	ENSMLUG00000005681	CSDE1	91	67.699	Myotis_lucifugus
ENSODEG00000005979	-	98	50.820	ENSNGAG00000012599	-	100	50.820	Nannospalax_galili
ENSODEG00000005979	-	98	67.478	ENSNGAG00000021929	Csde1	98	67.478	Nannospalax_galili
ENSODEG00000005979	-	98	52.097	ENSNBRG00000020808	csde1	96	52.097	Neolamprologus_brichardi
ENSODEG00000005979	-	98	67.478	ENSNLEG00000004842	CSDE1	94	67.478	Nomascus_leucogenys
ENSODEG00000005979	-	94	64.989	ENSMEUG00000002677	CSDE1	80	64.989	Notamacropus_eugenii
ENSODEG00000005979	-	94	63.387	ENSOPRG00000005002	CSDE1	60	63.387	Ochotona_princeps
ENSODEG00000005979	-	98	52.097	ENSONIG00000009309	csde1	97	52.097	Oreochromis_niloticus
ENSODEG00000005979	-	76	81.356	ENSOANG00000003346	-	78	81.356	Ornithorhynchus_anatinus
ENSODEG00000005979	-	98	67.478	ENSOCUG00000016438	CSDE1	91	67.478	Oryctolagus_cuniculus
ENSODEG00000005979	-	98	52.993	ENSORLG00000000707	csde1	97	52.759	Oryzias_latipes
ENSODEG00000005979	-	98	52.759	ENSORLG00020005148	csde1	97	52.759	Oryzias_latipes_hni
ENSODEG00000005979	-	98	52.993	ENSORLG00015019415	csde1	97	52.759	Oryzias_latipes_hsok
ENSODEG00000005979	-	98	53.437	ENSOMEG00000015656	csde1	97	53.201	Oryzias_melastigma
ENSODEG00000005979	-	98	68.142	ENSOGAG00000012127	CSDE1	91	68.142	Otolemur_garnettii
ENSODEG00000005979	-	98	68.142	ENSOARG00000020034	CSDE1	91	68.142	Ovis_aries
ENSODEG00000005979	-	98	67.699	ENSPPAG00000025861	CSDE1	96	67.699	Pan_paniscus
ENSODEG00000005979	-	98	67.920	ENSPPRG00000006747	CSDE1	91	67.920	Panthera_pardus
ENSODEG00000005979	-	98	67.920	ENSPTIG00000015468	CSDE1	97	67.920	Panthera_tigris_altaica
ENSODEG00000005979	-	98	67.699	ENSPTRG00000033721	CSDE1	97	67.699	Pan_troglodytes
ENSODEG00000005979	-	98	67.699	ENSPANG00000018873	CSDE1	96	67.699	Papio_anubis
ENSODEG00000005979	-	98	52.212	ENSPKIG00000009459	csde1	96	52.212	Paramormyrops_kingsleyae
ENSODEG00000005979	-	60	76.636	ENSPSIG00000003823	CSDE1	90	76.636	Pelodiscus_sinensis
ENSODEG00000005979	-	98	51.322	ENSPMGG00000000772	csde1	96	51.322	Periophthalmus_magnuspinnatus
ENSODEG00000005979	-	98	67.920	ENSPEMG00000020357	-	98	67.920	Peromyscus_maniculatus_bairdii
ENSODEG00000005979	-	98	65.487	ENSPCIG00000022587	CSDE1	97	65.487	Phascolarctos_cinereus
ENSODEG00000005979	-	98	51.204	ENSPFOG00000012664	csde1	96	51.860	Poecilia_formosa
ENSODEG00000005979	-	94	52.174	ENSPLAG00000017680	csde1	92	52.174	Poecilia_latipinna
ENSODEG00000005979	-	98	51.204	ENSPMEG00000005094	csde1	97	51.204	Poecilia_mexicana
ENSODEG00000005979	-	98	53.196	ENSPREG00000011631	csde1	97	50.756	Poecilia_reticulata
ENSODEG00000005979	-	98	67.699	ENSPPYG00000000996	CSDE1	97	67.699	Pongo_abelii
ENSODEG00000005979	-	98	67.920	ENSPCAG00000014368	CSDE1	76	67.920	Procavia_capensis
ENSODEG00000005979	-	66	75.472	ENSPCOG00000008223	-	93	75.472	Propithecus_coquereli
ENSODEG00000005979	-	98	67.920	ENSPCOG00000017893	CSDE1	97	67.920	Propithecus_coquereli
ENSODEG00000005979	-	98	58.850	ENSPVAG00000008225	CSDE1	91	58.850	Pteropus_vampyrus
ENSODEG00000005979	-	98	52.097	ENSPNYG00000013745	csde1	96	52.097	Pundamilia_nyererei
ENSODEG00000005979	-	98	52.097	ENSPNAG00000001958	csde1	97	52.097	Pygocentrus_nattereri
ENSODEG00000005979	-	98	67.920	ENSRNOG00000061058	Csde1	97	67.920	Rattus_norvegicus
ENSODEG00000005979	-	98	66.593	ENSRBIG00000038088	-	99	66.593	Rhinopithecus_bieti
ENSODEG00000005979	-	98	61.036	ENSRBIG00000038966	-	91	61.036	Rhinopithecus_bieti
ENSODEG00000005979	-	98	67.699	ENSRROG00000043101	CSDE1	98	66.824	Rhinopithecus_roxellana
ENSODEG00000005979	-	98	67.478	ENSSBOG00000035592	CSDE1	92	67.478	Saimiri_boliviensis_boliviensis
ENSODEG00000005979	-	98	65.487	ENSSHAG00000009831	CSDE1	96	65.487	Sarcophilus_harrisii
ENSODEG00000005979	-	98	53.965	ENSSFOG00015007498	csde1	97	53.392	Scleropages_formosus
ENSODEG00000005979	-	98	52.759	ENSSMAG00000007203	csde1	97	52.759	Scophthalmus_maximus
ENSODEG00000005979	-	98	52.097	ENSSDUG00000015380	csde1	96	52.097	Seriola_dumerili
ENSODEG00000005979	-	98	52.097	ENSSLDG00000008819	csde1	97	52.097	Seriola_lalandi_dorsalis
ENSODEG00000005979	-	98	66.372	ENSSARG00000000738	CSDE1	91	66.372	Sorex_araneus
ENSODEG00000005979	-	98	60.398	ENSSPUG00000008714	CSDE1	97	60.398	Sphenodon_punctatus
ENSODEG00000005979	-	98	52.097	ENSSPAG00000000716	csde1	96	52.097	Stegastes_partitus
ENSODEG00000005979	-	98	70.534	ENSSSCG00000006752	CSDE1	96	70.534	Sus_scrofa
ENSODEG00000005979	-	98	60.310	ENSTGUG00000000972	CSDE1	97	60.310	Taeniopygia_guttata
ENSODEG00000005979	-	98	50.885	ENSTRUG00000007996	csde1	96	50.885	Takifugu_rubripes
ENSODEG00000005979	-	98	67.478	ENSTTRG00000015583	CSDE1	91	67.478	Tursiops_truncatus
ENSODEG00000005979	-	65	85.263	ENSUAMG00000021779	-	95	85.263	Ursus_americanus
ENSODEG00000005979	-	77	67.045	ENSUAMG00000024289	-	88	67.045	Ursus_americanus
ENSODEG00000005979	-	98	63.274	ENSUMAG00000009720	-	84	63.274	Ursus_maritimus
ENSODEG00000005979	-	98	66.981	ENSUMAG00000011714	-	99	66.981	Ursus_maritimus
ENSODEG00000005979	-	98	84.071	ENSVPAG00000000749	CSDE1	72	84.071	Vicugna_pacos
ENSODEG00000005979	-	73	67.160	ENSVVUG00000009890	CSDE1	90	67.160	Vulpes_vulpes
ENSODEG00000005979	-	98	64.211	ENSXETG00000021448	csde1	97	57.930	Xenopus_tropicalis
ENSODEG00000005979	-	82	38.710	ENSXCOG00000000035	csde1	95	38.710	Xiphophorus_couchianus
ENSODEG00000005979	-	98	52.759	ENSXMAG00000009080	csde1	97	52.298	Xiphophorus_maculatus