EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006001 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 13877 bases
Position: chrJH651631.1:4119820-4133696
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008056	Ribosomal_L30	PF00327.20	2.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008179	-	486	-	ENSODEP00000008056	161 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006001	-	97	93.038	ENSODEG00000019187	-	88	93.038
ENSODEG00000006001	-	97	87.342	ENSODEG00000018681	-	88	87.342
ENSODEG00000006001	-	94	95.425	ENSODEG00000009949	-	95	95.425
ENSODEG00000006001	-	80	96.947	ENSODEG00000010546	-	99	96.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006001	-	96	85.897	ENSG00000185414	MRPL30	97	85.897	Homo_sapiens
ENSODEG00000006001	-	96	85.256	ENSAMEG00000013344	-	85	85.256	Ailuropoda_melanoleuca
ENSODEG00000006001	-	96	85.897	ENSANAG00000028266	-	97	85.897	Aotus_nancymaae
ENSODEG00000006001	-	89	50.685	ENSBTAG00000050222	-	89	50.685	Bos_taurus
ENSODEG00000006001	-	96	82.051	ENSBTAG00000038949	MRPL30	97	82.051	Bos_taurus
ENSODEG00000006001	-	96	87.821	ENSCJAG00000007085	-	97	87.821	Callithrix_jacchus
ENSODEG00000006001	-	96	85.256	ENSCAFG00000031628	-	97	85.256	Canis_familiaris
ENSODEG00000006001	-	96	85.256	ENSCAFG00020024965	-	97	85.256	Canis_lupus_dingo
ENSODEG00000006001	-	96	83.333	ENSCHIG00000024135	-	97	83.333	Capra_hircus
ENSODEG00000006001	-	96	82.692	ENSTSYG00000026939	-	97	82.692	Carlito_syrichta
ENSODEG00000006001	-	96	68.590	ENSTSYG00000037066	-	97	68.590	Carlito_syrichta
ENSODEG00000006001	-	94	88.312	ENSCPOG00000010716	-	99	88.312	Cavia_porcellus
ENSODEG00000006001	-	96	85.256	ENSCCAG00000034467	-	97	85.256	Cebus_capucinus
ENSODEG00000006001	-	96	81.529	ENSCCAG00000017186	-	97	81.529	Cebus_capucinus
ENSODEG00000006001	-	96	87.821	ENSCATG00000041078	-	97	87.821	Cercocebus_atys
ENSODEG00000006001	-	94	92.157	ENSCLAG00000005684	-	85	92.157	Chinchilla_lanigera
ENSODEG00000006001	-	96	87.179	ENSCSAG00000017218	-	97	87.179	Chlorocebus_sabaeus
ENSODEG00000006001	-	96	78.205	ENSCHOG00000005804	-	91	78.205	Choloepus_hoffmanni
ENSODEG00000006001	-	96	87.179	ENSCANG00000043682	-	97	87.179	Colobus_angolensis_palliatus
ENSODEG00000006001	-	96	83.974	ENSCGRG00001006119	Mrpl30	98	83.974	Cricetulus_griseus_chok1gshd
ENSODEG00000006001	-	96	83.974	ENSCGRG00000001910	Mrpl30	98	83.974	Cricetulus_griseus_crigri
ENSODEG00000006001	-	96	79.487	ENSDNOG00000018648	-	97	79.487	Dasypus_novemcinctus
ENSODEG00000006001	-	96	75.641	ENSDNOG00000032825	-	97	75.641	Dasypus_novemcinctus
ENSODEG00000006001	-	96	77.564	ENSDNOG00000044391	-	97	77.564	Dasypus_novemcinctus
ENSODEG00000006001	-	96	74.359	ENSDNOG00000042586	-	97	74.359	Dasypus_novemcinctus
ENSODEG00000006001	-	96	85.256	ENSDORG00000010734	Mrpl30	98	85.256	Dipodomys_ordii
ENSODEG00000006001	-	96	83.333	ENSETEG00000005006	-	92	83.333	Echinops_telfairi
ENSODEG00000006001	-	96	82.051	ENSEASG00005021843	-	61	82.051	Equus_asinus_asinus
ENSODEG00000006001	-	96	82.051	ENSECAG00000015993	-	61	82.051	Equus_caballus
ENSODEG00000006001	-	96	85.897	ENSFCAG00000024233	-	64	85.897	Felis_catus
ENSODEG00000006001	-	94	87.582	ENSFDAG00000009803	-	85	87.582	Fukomys_damarensis
ENSODEG00000006001	-	96	85.897	ENSGGOG00000041571	-	97	85.897	Gorilla_gorilla
ENSODEG00000006001	-	94	89.542	ENSHGLG00000006467	-	99	89.542	Heterocephalus_glaber_female
ENSODEG00000006001	-	94	89.542	ENSHGLG00100016969	-	99	89.542	Heterocephalus_glaber_male
ENSODEG00000006001	-	94	86.928	ENSJJAG00000006196	Mrpl30	95	86.928	Jaculus_jaculus
ENSODEG00000006001	-	96	83.974	ENSLAFG00000008151	-	85	83.974	Loxodonta_africana
ENSODEG00000006001	-	96	87.179	ENSMFAG00000001729	MRPL30	97	87.179	Macaca_fascicularis
ENSODEG00000006001	-	96	87.179	ENSMMUG00000038088	-	97	87.179	Macaca_mulatta
ENSODEG00000006001	-	96	74.026	ENSMNEG00000034146	-	96	74.026	Macaca_nemestrina
ENSODEG00000006001	-	96	87.821	ENSMLEG00000027758	-	97	87.821	Mandrillus_leucophaeus
ENSODEG00000006001	-	96	83.974	ENSMAUG00000017646	-	91	83.974	Mesocricetus_auratus
ENSODEG00000006001	-	94	64.052	ENSMAUG00000014813	-	95	64.052	Mesocricetus_auratus
ENSODEG00000006001	-	89	86.986	ENSMAUG00000021333	-	88	86.986	Mesocricetus_auratus
ENSODEG00000006001	-	96	85.256	ENSMICG00000011627	-	97	85.256	Microcebus_murinus
ENSODEG00000006001	-	96	83.333	ENSMOCG00000005615	Mrpl30	98	83.333	Microtus_ochrogaster
ENSODEG00000006001	-	96	82.692	MGP_CAROLIEiJ_G0014057	Mrpl30	100	84.375	Mus_caroli
ENSODEG00000006001	-	96	81.410	ENSMUSG00000026087	Mrpl30	100	82.812	Mus_musculus
ENSODEG00000006001	-	98	81.875	MGP_PahariEiJ_G0027303	Mrpl30	100	84.375	Mus_pahari
ENSODEG00000006001	-	96	82.051	MGP_SPRETEiJ_G0014861	Mrpl30	100	83.594	Mus_spretus
ENSODEG00000006001	-	96	83.974	ENSMPUG00000011085	-	97	83.974	Mustela_putorius_furo
ENSODEG00000006001	-	96	86.538	ENSMLUG00000029851	-	97	86.538	Myotis_lucifugus
ENSODEG00000006001	-	98	83.125	ENSNGAG00000020323	Mrpl30	100	83.125	Nannospalax_galili
ENSODEG00000006001	-	96	87.179	ENSNLEG00000027490	-	97	87.179	Nomascus_leucogenys
ENSODEG00000006001	-	91	84.564	ENSOPRG00000007331	-	89	84.564	Ochotona_princeps
ENSODEG00000006001	-	96	87.179	ENSOCUG00000004111	-	97	87.179	Oryctolagus_cuniculus
ENSODEG00000006001	-	96	75.641	ENSOGAG00000030016	-	97	75.641	Otolemur_garnettii
ENSODEG00000006001	-	96	85.256	ENSOGAG00000002241	-	93	85.256	Otolemur_garnettii
ENSODEG00000006001	-	93	80.263	ENSOGAG00000025954	-	94	80.263	Otolemur_garnettii
ENSODEG00000006001	-	96	83.974	ENSOARG00000013442	-	97	83.974	Ovis_aries
ENSODEG00000006001	-	96	85.897	ENSPPAG00000038932	-	97	85.897	Pan_paniscus
ENSODEG00000006001	-	96	85.256	ENSPPRG00000008888	-	97	85.256	Panthera_pardus
ENSODEG00000006001	-	96	85.256	ENSPTIG00000004998	-	97	85.256	Panthera_tigris_altaica
ENSODEG00000006001	-	96	85.897	ENSPTRG00000012275	-	97	85.897	Pan_troglodytes
ENSODEG00000006001	-	96	87.821	ENSPANG00000033489	-	97	87.821	Papio_anubis
ENSODEG00000006001	-	96	75.000	ENSPEMG00000007715	-	97	75.000	Peromyscus_maniculatus_bairdii
ENSODEG00000006001	-	96	86.538	ENSPEMG00000018330	-	98	86.538	Peromyscus_maniculatus_bairdii
ENSODEG00000006001	-	96	86.538	ENSPPYG00000019961	-	97	86.538	Pongo_abelii
ENSODEG00000006001	-	96	86.538	ENSPCOG00000013471	-	97	86.538	Propithecus_coquereli
ENSODEG00000006001	-	96	80.769	ENSPCOG00000000860	-	97	80.769	Propithecus_coquereli
ENSODEG00000006001	-	96	84.615	ENSPVAG00000006587	-	91	84.615	Pteropus_vampyrus
ENSODEG00000006001	-	96	82.051	ENSRNOG00000049330	Mrpl30	98	82.051	Rattus_norvegicus
ENSODEG00000006001	-	96	79.487	ENSRBIG00000041744	-	97	79.487	Rhinopithecus_bieti
ENSODEG00000006001	-	96	87.179	ENSRROG00000044692	-	97	87.179	Rhinopithecus_roxellana
ENSODEG00000006001	-	96	87.179	ENSSBOG00000036412	-	97	87.179	Saimiri_boliviensis_boliviensis
ENSODEG00000006001	-	83	54.478	ENSSPUG00000000679	-	63	54.478	Sphenodon_punctatus
ENSODEG00000006001	-	96	86.538	ENSSSCG00000008183	-	97	86.538	Sus_scrofa
ENSODEG00000006001	-	96	83.974	ENSTTRG00000004937	-	90	83.974	Tursiops_truncatus
ENSODEG00000006001	-	96	85.256	ENSUAMG00000015567	-	97	85.256	Ursus_americanus
ENSODEG00000006001	-	96	83.974	ENSUMAG00000008932	-	86	83.974	Ursus_maritimus