EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006035 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1742 bases
Position: chrJH651584.1:9409052-9410793
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008094	zf-CCCH_2	PF14608.6	1e-06	1	3
ENSODEP00000008094	zf-CCCH_2	PF14608.6	1e-06	2	3
ENSODEP00000008094	zf-CCCH_2	PF14608.6	1e-06	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008217	-	1053	-	ENSODEP00000008094	350 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006035	-	100	71.481	ENSODEG00000008995	-	73	71.021
ENSODEG00000006035	-	100	63.600	ENSODEG00000012083	-	63	63.600

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006035	-	100	67.974	ENSG00000100722	ZC3H14	100	66.667	Homo_sapiens
ENSODEG00000006035	-	95	50.355	ENSAPOG00000001640	zc3h14	50	49.669	Acanthochromis_polyacanthus
ENSODEG00000006035	-	100	63.082	ENSAMEG00000001478	ZC3H14	65	66.543	Ailuropoda_melanoleuca
ENSODEG00000006035	-	99	34.899	ENSACIG00000003703	zc3h14	82	35.084	Amphilophus_citrinellus
ENSODEG00000006035	-	98	48.322	ENSAOCG00000024218	zc3h14	52	49.333	Amphiprion_ocellaris
ENSODEG00000006035	-	99	47.712	ENSAPEG00000001867	zc3h14	52	48.701	Amphiprion_percula
ENSODEG00000006035	-	89	45.985	ENSATEG00000006018	zc3h14	51	49.635	Anabas_testudineus
ENSODEG00000006035	-	100	54.545	ENSAPLG00000008694	ZC3H14	59	58.442	Anas_platyrhynchos
ENSODEG00000006035	-	100	51.299	ENSACAG00000013021	ZC3H14	56	51.299	Anolis_carolinensis
ENSODEG00000006035	-	100	60.628	ENSANAG00000030417	-	89	62.871	Aotus_nancymaae
ENSODEG00000006035	-	100	65.031	ENSANAG00000032583	-	75	66.509	Aotus_nancymaae
ENSODEG00000006035	-	93	44.937	ENSACLG00000012665	zc3h14	52	46.203	Astatotilapia_calliptera
ENSODEG00000006035	-	100	68.421	ENSBTAG00000030453	ZC3H14	71	59.911	Bos_taurus
ENSODEG00000006035	-	100	67.974	ENSCJAG00000017345	ZC3H14	73	64.706	Callithrix_jacchus
ENSODEG00000006035	-	100	67.974	ENSCAFG00000017415	ZC3H14	57	67.974	Canis_familiaris
ENSODEG00000006035	-	99	69.333	ENSCAFG00020016522	ZC3H14	99	67.464	Canis_lupus_dingo
ENSODEG00000006035	-	100	46.394	ENSCHIG00000009115	-	79	48.052	Capra_hircus
ENSODEG00000006035	-	100	63.084	ENSCHIG00000022904	ZC3H14	73	62.972	Capra_hircus
ENSODEG00000006035	-	100	62.092	ENSTSYG00000010797	ZC3H14	73	61.085	Carlito_syrichta
ENSODEG00000006035	-	95	69.456	ENSCAPG00000010444	ZC3H14	65	69.362	Cavia_aperea
ENSODEG00000006035	-	100	69.737	ENSCPOG00000013632	ZC3H14	73	68.160	Cavia_porcellus
ENSODEG00000006035	-	100	67.974	ENSCCAG00000036483	-	85	66.274	Cebus_capucinus
ENSODEG00000006035	-	100	67.974	ENSCATG00000026685	ZC3H14	73	65.566	Cercocebus_atys
ENSODEG00000006035	-	100	67.523	ENSCLAG00000010139	ZC3H14	73	67.453	Chinchilla_lanigera
ENSODEG00000006035	-	100	67.974	ENSCSAG00000011569	ZC3H14	67	61.168	Chlorocebus_sabaeus
ENSODEG00000006035	-	100	60.959	ENSCHOG00000000279	-	55	60.870	Choloepus_hoffmanni
ENSODEG00000006035	-	100	59.740	ENSCPBG00000008376	ZC3H14	58	59.740	Chrysemys_picta_bellii
ENSODEG00000006035	-	100	67.974	ENSCANG00000036833	ZC3H14	79	62.000	Colobus_angolensis_palliatus
ENSODEG00000006035	-	100	67.320	ENSCGRG00001015677	Zc3h14	73	62.353	Cricetulus_griseus_chok1gshd
ENSODEG00000006035	-	100	67.320	ENSCGRG00000017688	Zc3h14	77	62.353	Cricetulus_griseus_crigri
ENSODEG00000006035	-	99	50.769	ENSCSEG00000013652	zc3h14	50	50.769	Cynoglossus_semilaevis
ENSODEG00000006035	-	96	44.785	ENSCVAG00000000590	zc3h14	53	44.785	Cyprinodon_variegatus
ENSODEG00000006035	-	100	64.469	ENSDNOG00000010289	ZC3H14	65	64.312	Dasypus_novemcinctus
ENSODEG00000006035	-	100	65.132	ENSDORG00000009066	Zc3h14	81	62.972	Dipodomys_ordii
ENSODEG00000006035	-	99	67.974	ENSETEG00000002609	ZC3H14	58	67.974	Echinops_telfairi
ENSODEG00000006035	-	100	63.082	ENSEASG00005020371	ZC3H14	65	66.543	Equus_asinus_asinus
ENSODEG00000006035	-	100	63.908	ENSECAG00000013214	ZC3H14	78	66.118	Equus_caballus
ENSODEG00000006035	-	99	34.679	ENSELUG00000005015	zc3h14	84	33.255	Esox_lucius
ENSODEG00000006035	-	100	67.974	ENSFCAG00000012898	-	73	66.981	Felis_catus
ENSODEG00000006035	-	100	68.537	ENSFCAG00000039611	-	100	66.585	Felis_catus
ENSODEG00000006035	-	99	56.494	ENSFALG00000012422	ZC3H14	58	56.494	Ficedula_albicollis
ENSODEG00000006035	-	100	69.231	ENSFDAG00000009953	ZC3H14	73	69.575	Fukomys_damarensis
ENSODEG00000006035	-	99	44.937	ENSFHEG00000020403	zc3h14	52	45.570	Fundulus_heteroclitus
ENSODEG00000006035	-	100	58.442	ENSGALG00000010622	ZC3H14	54	58.442	Gallus_gallus
ENSODEG00000006035	-	99	42.857	ENSGAFG00000002915	zc3h14	54	42.857	Gambusia_affinis
ENSODEG00000006035	-	62	42.515	ENSGACG00000010599	zc3h14	55	43.713	Gasterosteus_aculeatus
ENSODEG00000006035	-	100	60.390	ENSGAGG00000005013	ZC3H14	61	60.390	Gopherus_agassizii
ENSODEG00000006035	-	99	67.550	ENSGGOG00000010278	ZC3H14	79	62.000	Gorilla_gorilla
ENSODEG00000006035	-	93	44.937	ENSHBUG00000012522	zc3h14	55	46.203	Haplochromis_burtoni
ENSODEG00000006035	-	100	67.991	ENSHGLG00000017715	ZC3H14	73	67.925	Heterocephalus_glaber_female
ENSODEG00000006035	-	100	67.991	ENSHGLG00100014539	ZC3H14	75	67.925	Heterocephalus_glaber_male
ENSODEG00000006035	-	100	66.121	ENSSTOG00000013176	ZC3H14	75	65.330	Ictidomys_tridecemlineatus
ENSODEG00000006035	-	100	65.789	ENSJJAG00000005306	-	75	63.679	Jaculus_jaculus
ENSODEG00000006035	-	100	63.158	ENSJJAG00000022340	-	61	63.158	Jaculus_jaculus
ENSODEG00000006035	-	99	42.500	ENSKMAG00000013693	zc3h14	57	42.500	Kryptolebias_marmoratus
ENSODEG00000006035	-	97	50.318	ENSLACG00000008327	ZC3H14	54	51.299	Latimeria_chalumnae
ENSODEG00000006035	-	95	48.052	ENSLOCG00000010387	zc3h14	53	48.667	Lepisosteus_oculatus
ENSODEG00000006035	-	100	63.636	ENSLAFG00000002998	ZC3H14	65	63.469	Loxodonta_africana
ENSODEG00000006035	-	100	67.974	ENSMFAG00000032254	ZC3H14	73	65.566	Macaca_fascicularis
ENSODEG00000006035	-	100	67.974	ENSMMUG00000004603	ZC3H14	73	65.566	Macaca_mulatta
ENSODEG00000006035	-	100	67.974	ENSMNEG00000013027	ZC3H14	73	65.566	Macaca_nemestrina
ENSODEG00000006035	-	100	67.974	ENSMLEG00000031286	ZC3H14	75	65.330	Mandrillus_leucophaeus
ENSODEG00000006035	-	97	44.311	ENSMAMG00000017380	zc3h14	52	44.311	Mastacembelus_armatus
ENSODEG00000006035	-	93	44.937	ENSMZEG00005016319	zc3h14	52	46.203	Maylandia_zebra
ENSODEG00000006035	-	100	58.491	ENSMGAG00000013009	ZC3H14	59	58.491	Meleagris_gallopavo
ENSODEG00000006035	-	100	61.305	ENSMAUG00000022152	Zc3h14	73	60.941	Mesocricetus_auratus
ENSODEG00000006035	-	99	68.874	ENSMICG00000016669	ZC3H14	74	66.826	Microcebus_murinus
ENSODEG00000006035	-	100	62.471	ENSMOCG00000014022	Zc3h14	73	62.118	Microtus_ochrogaster
ENSODEG00000006035	-	99	35.154	ENSMMOG00000015654	zc3h14	77	35.629	Mola_mola
ENSODEG00000006035	-	100	65.359	ENSMODG00000003282	ZC3H14	57	65.359	Monodelphis_domestica
ENSODEG00000006035	-	99	34.625	ENSMALG00000003067	zc3h14	78	32.936	Monopterus_albus
ENSODEG00000006035	-	100	66.447	MGP_CAROLIEiJ_G0018012	Zc3h14	73	61.374	Mus_caroli
ENSODEG00000006035	-	100	65.132	ENSMUSG00000021012	Zc3h14	100	57.563	Mus_musculus
ENSODEG00000006035	-	100	66.447	MGP_PahariEiJ_G0029770	Zc3h14	74	57.271	Mus_pahari
ENSODEG00000006035	-	100	67.974	ENSMPUG00000008228	ZC3H14	59	67.974	Mustela_putorius_furo
ENSODEG00000006035	-	100	69.281	ENSMLUG00000016321	ZC3H14	57	69.281	Myotis_lucifugus
ENSODEG00000006035	-	100	69.079	ENSNGAG00000017541	Zc3h14	73	65.802	Nannospalax_galili
ENSODEG00000006035	-	99	33.732	ENSNBRG00000019192	zc3h14	79	33.413	Neolamprologus_brichardi
ENSODEG00000006035	-	100	67.320	ENSNLEG00000016907	ZC3H14	72	59.906	Nomascus_leucogenys
ENSODEG00000006035	-	70	64.935	ENSMEUG00000010740	ZC3H14	51	64.935	Notamacropus_eugenii
ENSODEG00000006035	-	93	45.625	ENSONIG00000015292	zc3h14	53	46.875	Oreochromis_niloticus
ENSODEG00000006035	-	100	58.289	ENSOANG00000015633	-	66	58.289	Ornithorhynchus_anatinus
ENSODEG00000006035	-	100	68.627	ENSOCUG00000015503	-	58	68.627	Oryctolagus_cuniculus
ENSODEG00000006035	-	100	63.427	ENSOCUG00000026622	-	72	63.520	Oryctolagus_cuniculus
ENSODEG00000006035	-	99	49.020	ENSORLG00000009049	zc3h14	53	50.327	Oryzias_latipes
ENSODEG00000006035	-	99	49.020	ENSORLG00020002299	zc3h14	53	50.327	Oryzias_latipes_hni
ENSODEG00000006035	-	99	48.366	ENSORLG00015017483	zc3h14	53	50.327	Oryzias_latipes_hsok
ENSODEG00000006035	-	89	48.936	ENSOMEG00000018596	zc3h14	58	49.669	Oryzias_melastigma
ENSODEG00000006035	-	100	67.320	ENSOGAG00000005373	ZC3H14	67	62.199	Otolemur_garnettii
ENSODEG00000006035	-	99	66.225	ENSOARG00000003198	ZC3H14	58	66.225	Ovis_aries
ENSODEG00000006035	-	100	67.974	ENSPPAG00000035751	ZC3H14	73	66.038	Pan_paniscus
ENSODEG00000006035	-	100	67.974	ENSPPRG00000006467	ZC3H14	73	66.981	Panthera_pardus
ENSODEG00000006035	-	100	67.320	ENSPTIG00000012741	ZC3H14	79	61.013	Panthera_tigris_altaica
ENSODEG00000006035	-	100	67.974	ENSPTRG00000006608	ZC3H14	73	66.038	Pan_troglodytes
ENSODEG00000006035	-	100	67.974	ENSPANG00000012704	ZC3H14	73	65.802	Papio_anubis
ENSODEG00000006035	-	92	49.306	ENSPKIG00000014248	zc3h14	53	49.306	Paramormyrops_kingsleyae
ENSODEG00000006035	-	100	59.091	ENSPSIG00000010899	ZC3H14	60	61.039	Pelodiscus_sinensis
ENSODEG00000006035	-	62	39.362	ENSPMGG00000017242	zc3h14	97	34.704	Periophthalmus_magnuspinnatus
ENSODEG00000006035	-	99	65.772	ENSPCIG00000011633	ZC3H14	99	57.619	Phascolarctos_cinereus
ENSODEG00000006035	-	94	49.635	ENSPFOG00000008213	zc3h14	52	46.980	Poecilia_formosa
ENSODEG00000006035	-	98	46.405	ENSPLAG00000006557	zc3h14	56	46.405	Poecilia_latipinna
ENSODEG00000006035	-	94	49.635	ENSPMEG00000018330	zc3h14	52	46.980	Poecilia_mexicana
ENSODEG00000006035	-	97	46.309	ENSPREG00000019413	zc3h14	54	44.937	Poecilia_reticulata
ENSODEG00000006035	-	100	67.974	ENSPPYG00000006053	ZC3H14	67	61.512	Pongo_abelii
ENSODEG00000006035	-	92	68.627	ENSPCOG00000025591	ZC3H14	74	67.431	Propithecus_coquereli
ENSODEG00000006035	-	100	58.929	ENSPVAG00000014133	ZC3H14	65	62.454	Pteropus_vampyrus
ENSODEG00000006035	-	93	44.937	ENSPNYG00000007634	zc3h14	52	46.203	Pundamilia_nyererei
ENSODEG00000006035	-	100	66.013	ENSRNOG00000004083	Zc3h14	74	58.000	Rattus_norvegicus
ENSODEG00000006035	-	100	67.320	ENSRBIG00000011607	ZC3H14	73	65.802	Rhinopithecus_bieti
ENSODEG00000006035	-	100	67.320	ENSRROG00000029717	ZC3H14	73	65.802	Rhinopithecus_roxellana
ENSODEG00000006035	-	100	67.308	ENSSBOG00000017936	-	75	65.094	Saimiri_boliviensis_boliviensis
ENSODEG00000006035	-	100	67.742	ENSSBOG00000010853	-	80	67.742	Saimiri_boliviensis_boliviensis
ENSODEG00000006035	-	100	65.359	ENSSHAG00000015169	ZC3H14	57	65.359	Sarcophilus_harrisii
ENSODEG00000006035	-	99	44.199	ENSSFOG00015007976	zc3h14	57	44.199	Scleropages_formosus
ENSODEG00000006035	-	97	47.917	ENSSMAG00000011976	zc3h14	51	47.917	Scophthalmus_maximus
ENSODEG00000006035	-	99	48.408	ENSSDUG00000015595	zc3h14	54	48.408	Seriola_dumerili
ENSODEG00000006035	-	99	48.408	ENSSLDG00000001706	zc3h14	53	48.408	Seriola_lalandi_dorsalis
ENSODEG00000006035	-	100	65.132	ENSSARG00000014192	ZC3H14	67	59.851	Sorex_araneus
ENSODEG00000006035	-	90	55.844	ENSSPUG00000012695	ZC3H14	61	50.000	Sphenodon_punctatus
ENSODEG00000006035	-	99	46.108	ENSSPAG00000014475	zc3h14	57	44.271	Stegastes_partitus
ENSODEG00000006035	-	100	70.395	ENSSSCG00000002426	ZC3H14	73	66.745	Sus_scrofa
ENSODEG00000006035	-	99	56.291	ENSTGUG00000012417	ZC3H14	58	56.291	Taeniopygia_guttata
ENSODEG00000006035	-	96	46.207	ENSTRUG00000009079	zc3h14	52	46.207	Takifugu_rubripes
ENSODEG00000006035	-	99	43.529	ENSTNIG00000016348	zc3h14	54	43.529	Tetraodon_nigroviridis
ENSODEG00000006035	-	100	65.116	ENSUAMG00000008799	ZC3H14	100	67.381	Ursus_americanus
ENSODEG00000006035	-	100	64.138	ENSUMAG00000006669	ZC3H14	78	66.353	Ursus_maritimus
ENSODEG00000006035	-	100	63.799	ENSVPAG00000005488	ZC3H14	66	67.286	Vicugna_pacos
ENSODEG00000006035	-	100	67.974	ENSVVUG00000027875	ZC3H14	79	62.889	Vulpes_vulpes
ENSODEG00000006035	-	92	51.678	ENSXETG00000031997	ZC3H14	52	51.678	Xenopus_tropicalis
ENSODEG00000006035	-	95	50.000	ENSXMAG00000004041	zc3h14	57	44.785	Xiphophorus_maculatus