EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000006075 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 12878 bases
Position: chrJH651599.1:11471132-11484009
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008145	zf-U11-48K	PF05253.12	6.2e-10	1	1
ENSODEP00000008145	zf-TRM13_CCCH	PF11722.8	3.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008268	-	528	-	ENSODEP00000008145	175 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006075	-	99	86.782	ENSG00000122435	TRMT13	100	88.991	Homo_sapiens
ENSODEG00000006075	-	88	57.792	ENSACIG00000005804	trmt13	100	48.252	Amphilophus_citrinellus
ENSODEG00000006075	-	95	89.222	ENSANAG00000019525	TRMT13	100	89.908	Aotus_nancymaae
ENSODEG00000006075	-	95	86.826	ENSCJAG00000000200	TRMT13	99	89.908	Callithrix_jacchus
ENSODEG00000006075	-	95	88.889	ENSCAFG00020011572	TRMT13	58	88.889	Canis_lupus_dingo
ENSODEG00000006075	-	91	88.679	ENSTSYG00000010811	TRMT13	99	88.000	Carlito_syrichta
ENSODEG00000006075	-	95	88.024	ENSCCAG00000023772	TRMT13	100	88.991	Cebus_capucinus
ENSODEG00000006075	-	95	89.820	ENSCATG00000033556	TRMT13	100	88.991	Cercocebus_atys
ENSODEG00000006075	-	95	90.419	ENSCANG00000034659	TRMT13	100	89.908	Colobus_angolensis_palliatus
ENSODEG00000006075	-	95	83.041	ENSDNOG00000001710	TRMT13	52	83.041	Dasypus_novemcinctus
ENSODEG00000006075	-	95	92.216	ENSFCAG00000030618	TRMT13	100	92.661	Felis_catus
ENSODEG00000006075	-	88	53.548	ENSGAFG00000001577	trmt13	79	45.517	Gambusia_affinis
ENSODEG00000006075	-	88	72.903	ENSGAGG00000023303	TRMT13	56	72.903	Gopherus_agassizii
ENSODEG00000006075	-	95	89.820	ENSGGOG00000005616	TRMT13	100	88.073	Gorilla_gorilla
ENSODEG00000006075	-	88	59.740	ENSIPUG00000024787	trmt13	52	55.414	Ictalurus_punctatus
ENSODEG00000006075	-	95	90.419	ENSMFAG00000034681	TRMT13	100	89.908	Macaca_fascicularis
ENSODEG00000006075	-	95	90.419	ENSMMUG00000004243	TRMT13	100	89.908	Macaca_mulatta
ENSODEG00000006075	-	95	90.419	ENSMNEG00000036102	TRMT13	100	89.908	Macaca_nemestrina
ENSODEG00000006075	-	95	91.018	ENSMLEG00000034258	TRMT13	100	90.826	Mandrillus_leucophaeus
ENSODEG00000006075	-	95	91.018	ENSMICG00000005283	TRMT13	100	91.743	Microcebus_murinus
ENSODEG00000006075	-	95	48.555	ENSMALG00000020965	trmt13	90	45.000	Monopterus_albus
ENSODEG00000006075	-	100	88.000	MGP_CAROLIEiJ_G0025568	Trmt13	99	88.000	Mus_caroli
ENSODEG00000006075	-	100	86.857	ENSMUSG00000033439	Trmt13	99	86.857	Mus_musculus
ENSODEG00000006075	-	100	88.571	MGP_PahariEiJ_G0027014	Trmt13	99	88.571	Mus_pahari
ENSODEG00000006075	-	100	87.429	MGP_SPRETEiJ_G0026518	Trmt13	99	87.429	Mus_spretus
ENSODEG00000006075	-	76	89.474	ENSMPUG00000012169	-	98	89.474	Mustela_putorius_furo
ENSODEG00000006075	-	95	90.419	ENSNLEG00000035917	TRMT13	100	89.908	Nomascus_leucogenys
ENSODEG00000006075	-	95	69.048	ENSMEUG00000013346	-	68	69.048	Notamacropus_eugenii
ENSODEG00000006075	-	95	89.820	ENSPPAG00000043736	TRMT13	100	88.991	Pan_paniscus
ENSODEG00000006075	-	95	92.216	ENSPPRG00000003424	TRMT13	100	92.661	Panthera_pardus
ENSODEG00000006075	-	95	92.216	ENSPTIG00000018598	TRMT13	100	92.661	Panthera_tigris_altaica
ENSODEG00000006075	-	95	89.820	ENSPTRG00000001001	TRMT13	100	88.991	Pan_troglodytes
ENSODEG00000006075	-	95	90.419	ENSPANG00000007598	TRMT13	100	89.908	Papio_anubis
ENSODEG00000006075	-	95	91.018	ENSPCOG00000017984	TRMT13	100	91.743	Propithecus_coquereli
ENSODEG00000006075	-	95	90.419	ENSRBIG00000037686	TRMT13	100	89.908	Rhinopithecus_bieti
ENSODEG00000006075	-	95	90.419	ENSRROG00000044057	TRMT13	100	89.908	Rhinopithecus_roxellana
ENSODEG00000006075	-	95	89.820	ENSSBOG00000026541	TRMT13	100	89.908	Saimiri_boliviensis_boliviensis
ENSODEG00000006075	-	54	56.250	ENSXCOG00000008120	-	88	56.250	Xiphophorus_couchianus