EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006170 (Gene tree)
Gene ID: 101579396
Gene Symbol: -
Alias: -
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 9149 bases
Position: chrJH651538.1:13824872-13834020
Accession: 101579396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008279	Ribonuc_P_40	PF08584.11	2.8e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008402	-	931	XM_012514073	ENSODEP00000008279	299 (aa)	XP_012369527	-

Gene Model

Click here to download ENSODEG00000006170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006170	-	100	91.615	ENSODEG00000007255	-	89	91.615
ENSODEG00000006170	-	100	86.335	ENSODEG00000018153	-	88	86.335

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006170	-	100	83.278	ENSG00000124787	RPP40	100	76.898	Homo_sapiens
ENSODEG00000006170	-	100	34.114	ENSAPOG00000008660	rpp40	92	34.114	Acanthochromis_polyacanthus
ENSODEG00000006170	-	100	76.708	ENSAMEG00000012938	RPP40	89	76.708	Ailuropoda_melanoleuca
ENSODEG00000006170	-	100	32.609	ENSACIG00000003617	rpp40	88	32.609	Amphilophus_citrinellus
ENSODEG00000006170	-	100	34.472	ENSAOCG00000011846	rpp40	89	34.472	Amphiprion_ocellaris
ENSODEG00000006170	-	100	34.472	ENSAPEG00000001322	rpp40	89	34.472	Amphiprion_percula
ENSODEG00000006170	-	100	33.951	ENSATEG00000006584	rpp40	89	34.877	Anabas_testudineus
ENSODEG00000006170	-	93	62.252	ENSAPLG00000005691	RPP40	99	62.252	Anas_platyrhynchos
ENSODEG00000006170	-	99	59.813	ENSACAG00000006550	RPP40	79	59.813	Anolis_carolinensis
ENSODEG00000006170	-	100	82.274	ENSANAG00000029246	RPP40	88	82.274	Aotus_nancymaae
ENSODEG00000006170	-	98	34.810	ENSACLG00000015883	rpp40	85	34.810	Astatotilapia_calliptera
ENSODEG00000006170	-	100	44.860	ENSAMXG00000001755	rpp40	89	44.860	Astyanax_mexicanus
ENSODEG00000006170	-	100	74.845	ENSBTAG00000003332	RPP40	89	74.845	Bos_taurus
ENSODEG00000006170	-	100	82.274	ENSCJAG00000021373	RPP40	88	82.274	Callithrix_jacchus
ENSODEG00000006170	-	100	76.087	ENSCAFG00000009435	RPP40	89	76.087	Canis_familiaris
ENSODEG00000006170	-	100	76.087	ENSCAFG00020013380	RPP40	89	76.087	Canis_lupus_dingo
ENSODEG00000006170	-	100	75.466	ENSCHIG00000016849	RPP40	100	74.587	Capra_hircus
ENSODEG00000006170	-	100	84.281	ENSTSYG00000032857	RPP40	100	77.888	Carlito_syrichta
ENSODEG00000006170	-	100	78.947	ENSCAPG00000004957	RPP40	96	78.947	Cavia_aperea
ENSODEG00000006170	-	100	88.629	ENSCPOG00000005855	RPP40	88	88.629	Cavia_porcellus
ENSODEG00000006170	-	100	82.609	ENSCCAG00000019809	RPP40	88	82.609	Cebus_capucinus
ENSODEG00000006170	-	100	82.609	ENSCATG00000038787	RPP40	88	82.609	Cercocebus_atys
ENSODEG00000006170	-	100	88.963	ENSCLAG00000003235	RPP40	88	88.963	Chinchilla_lanigera
ENSODEG00000006170	-	100	77.019	ENSCSAG00000007307	RPP40	89	77.019	Chlorocebus_sabaeus
ENSODEG00000006170	-	84	66.000	ENSCHOG00000005856	-	100	66.000	Choloepus_hoffmanni
ENSODEG00000006170	-	100	65.528	ENSCPBG00000009003	RPP40	88	65.528	Chrysemys_picta_bellii
ENSODEG00000006170	-	100	82.943	ENSCANG00000033965	RPP40	88	82.943	Colobus_angolensis_palliatus
ENSODEG00000006170	-	100	78.261	ENSCGRG00001018328	Rpp40	88	78.261	Cricetulus_griseus_chok1gshd
ENSODEG00000006170	-	100	72.671	ENSCGRG00000011344	Rpp40	89	72.671	Cricetulus_griseus_crigri
ENSODEG00000006170	-	100	32.508	ENSCSEG00000015006	-	89	32.508	Cynoglossus_semilaevis
ENSODEG00000006170	-	72	35.814	ENSCVAG00000012169	rpp40	86	34.746	Cyprinodon_variegatus
ENSODEG00000006170	-	100	46.440	ENSDARG00000017605	rpp40	89	46.440	Danio_rerio
ENSODEG00000006170	-	78	69.531	ENSDNOG00000048136	RPP40	86	69.531	Dasypus_novemcinctus
ENSODEG00000006170	-	95	60.345	ENSDORG00000011196	-	80	65.759	Dipodomys_ordii
ENSODEG00000006170	-	100	74.224	ENSDORG00000029944	-	89	74.224	Dipodomys_ordii
ENSODEG00000006170	-	88	81.818	ENSETEG00000007458	RPP40	72	81.818	Echinops_telfairi
ENSODEG00000006170	-	99	40.312	ENSEBUG00000000386	rpp40	98	40.625	Eptatretus_burgeri
ENSODEG00000006170	-	100	76.398	ENSEASG00005012116	RPP40	71	76.398	Equus_asinus_asinus
ENSODEG00000006170	-	100	76.398	ENSECAG00000017247	RPP40	71	76.398	Equus_caballus
ENSODEG00000006170	-	64	69.474	ENSEEUG00000012087	RPP40	64	69.474	Erinaceus_europaeus
ENSODEG00000006170	-	100	44.892	ENSELUG00000017004	rpp40	89	44.892	Esox_lucius
ENSODEG00000006170	-	100	83.612	ENSFCAG00000009249	RPP40	88	83.612	Felis_catus
ENSODEG00000006170	-	97	60.856	ENSFALG00000013166	RPP40	100	60.856	Ficedula_albicollis
ENSODEG00000006170	-	100	81.056	ENSFDAG00000013001	-	89	81.056	Fukomys_damarensis
ENSODEG00000006170	-	91	68.727	ENSFDAG00000000265	-	100	68.727	Fukomys_damarensis
ENSODEG00000006170	-	100	36.646	ENSFHEG00000021429	rpp40	79	36.646	Fundulus_heteroclitus
ENSODEG00000006170	-	100	36.478	ENSGMOG00000018653	rpp40	100	36.478	Gadus_morhua
ENSODEG00000006170	-	100	66.555	ENSGALG00000036074	RPP40	88	66.555	Gallus_gallus
ENSODEG00000006170	-	100	34.161	ENSGACG00000002472	rpp40	98	37.455	Gasterosteus_aculeatus
ENSODEG00000006170	-	100	67.081	ENSGAGG00000012918	RPP40	88	67.081	Gopherus_agassizii
ENSODEG00000006170	-	100	83.278	ENSGGOG00000013764	RPP40	88	83.278	Gorilla_gorilla
ENSODEG00000006170	-	100	34.783	ENSHBUG00000009378	rpp40	92	34.783	Haplochromis_burtoni
ENSODEG00000006170	-	100	85.619	ENSHGLG00000004871	RPP40	88	85.619	Heterocephalus_glaber_female
ENSODEG00000006170	-	100	85.953	ENSHGLG00100002080	RPP40	88	85.953	Heterocephalus_glaber_male
ENSODEG00000006170	-	100	43.302	ENSIPUG00000008951	RPP40	89	43.302	Ictalurus_punctatus
ENSODEG00000006170	-	100	75.776	ENSSTOG00000011199	RPP40	89	75.776	Ictidomys_tridecemlineatus
ENSODEG00000006170	-	100	78.930	ENSJJAG00000020629	Rpp40	88	78.930	Jaculus_jaculus
ENSODEG00000006170	-	100	33.540	ENSKMAG00000019358	rpp40	89	33.540	Kryptolebias_marmoratus
ENSODEG00000006170	-	100	35.404	ENSLBEG00000022724	rpp40	89	35.404	Labrus_bergylta
ENSODEG00000006170	-	100	55.280	ENSLACG00000014848	RPP40	89	55.280	Latimeria_chalumnae
ENSODEG00000006170	-	100	50.311	ENSLOCG00000011650	rpp40	89	50.311	Lepisosteus_oculatus
ENSODEG00000006170	-	94	80.357	ENSLAFG00000007530	RPP40	100	80.357	Loxodonta_africana
ENSODEG00000006170	-	100	82.609	ENSMFAG00000043100	RPP40	88	82.609	Macaca_fascicularis
ENSODEG00000006170	-	100	82.943	ENSMMUG00000004966	RPP40	88	82.943	Macaca_mulatta
ENSODEG00000006170	-	100	83.278	ENSMNEG00000041986	RPP40	100	76.898	Macaca_nemestrina
ENSODEG00000006170	-	100	73.333	ENSMLEG00000040851	RPP40	81	85.714	Mandrillus_leucophaeus
ENSODEG00000006170	-	100	34.161	ENSMAMG00000019551	rpp40	88	34.161	Mastacembelus_armatus
ENSODEG00000006170	-	100	35.404	ENSMZEG00005019475	rpp40	89	35.404	Maylandia_zebra
ENSODEG00000006170	-	100	62.422	ENSMGAG00000004009	RPP40	89	62.422	Meleagris_gallopavo
ENSODEG00000006170	-	100	82.274	ENSMAUG00000010268	Rpp40	88	82.274	Mesocricetus_auratus
ENSODEG00000006170	-	100	81.605	ENSMICG00000003297	RPP40	88	81.605	Microcebus_murinus
ENSODEG00000006170	-	100	81.271	ENSMOCG00000000305	Rpp40	88	81.271	Microtus_ochrogaster
ENSODEG00000006170	-	85	37.209	ENSMMOG00000020591	-	81	37.209	Mola_mola
ENSODEG00000006170	-	100	69.659	ENSMODG00000009826	RPP40	89	69.659	Monodelphis_domestica
ENSODEG00000006170	-	100	33.230	ENSMALG00000020133	rpp40	99	32.278	Monopterus_albus
ENSODEG00000006170	-	100	82.609	MGP_CAROLIEiJ_G0018429	Rpp40	88	82.609	Mus_caroli
ENSODEG00000006170	-	100	83.946	ENSMUSG00000021418	Rpp40	88	83.946	Mus_musculus
ENSODEG00000006170	-	100	82.274	MGP_PahariEiJ_G0019497	Rpp40	88	82.274	Mus_pahari
ENSODEG00000006170	-	100	83.278	MGP_SPRETEiJ_G0019309	Rpp40	88	83.278	Mus_spretus
ENSODEG00000006170	-	100	77.019	ENSMPUG00000000530	RPP40	83	77.019	Mustela_putorius_furo
ENSODEG00000006170	-	100	75.155	ENSMLUG00000000501	RPP40	89	75.155	Myotis_lucifugus
ENSODEG00000006170	-	94	72.695	ENSNGAG00000022529	-	87	72.695	Nannospalax_galili
ENSODEG00000006170	-	100	82.943	ENSNGAG00000023955	-	88	82.943	Nannospalax_galili
ENSODEG00000006170	-	99	37.333	ENSNBRG00000017465	rpp40	86	37.624	Neolamprologus_brichardi
ENSODEG00000006170	-	100	82.274	ENSNLEG00000034397	RPP40	88	82.274	Nomascus_leucogenys
ENSODEG00000006170	-	100	68.944	ENSMEUG00000005300	RPP40	89	68.944	Notamacropus_eugenii
ENSODEG00000006170	-	100	34.783	ENSONIG00000014016	rpp40	88	34.783	Oreochromis_niloticus
ENSODEG00000006170	-	93	66.337	ENSOANG00000001200	RPP40	99	66.337	Ornithorhynchus_anatinus
ENSODEG00000006170	-	99	68.438	ENSOCUG00000000354	RPP40	88	68.438	Oryctolagus_cuniculus
ENSODEG00000006170	-	100	33.230	ENSORLG00000008242	-	89	33.230	Oryzias_latipes
ENSODEG00000006170	-	100	33.540	ENSORLG00020013745	-	81	33.540	Oryzias_latipes_hni
ENSODEG00000006170	-	100	33.540	ENSORLG00015000887	-	89	33.540	Oryzias_latipes_hsok
ENSODEG00000006170	-	100	33.851	ENSOMEG00000002747	rpp40	89	33.851	Oryzias_melastigma
ENSODEG00000006170	-	100	76.398	ENSOGAG00000006055	RPP40	89	76.398	Otolemur_garnettii
ENSODEG00000006170	-	100	73.765	ENSOARG00000018783	RPP40	100	73.597	Ovis_aries
ENSODEG00000006170	-	100	83.278	ENSPPAG00000023703	RPP40	88	83.278	Pan_paniscus
ENSODEG00000006170	-	100	83.278	ENSPPRG00000005612	RPP40	88	83.278	Panthera_pardus
ENSODEG00000006170	-	100	75.920	ENSPTIG00000018847	RPP40	88	75.920	Panthera_tigris_altaica
ENSODEG00000006170	-	100	82.943	ENSPTRG00000017690	RPP40	88	82.943	Pan_troglodytes
ENSODEG00000006170	-	100	82.943	ENSPANG00000017865	RPP40	88	82.943	Papio_anubis
ENSODEG00000006170	-	100	44.582	ENSPKIG00000006311	rpp40	89	44.582	Paramormyrops_kingsleyae
ENSODEG00000006170	-	74	69.820	ENSPSIG00000007854	RPP40	100	69.820	Pelodiscus_sinensis
ENSODEG00000006170	-	95	80.351	ENSPEMG00000020809	Rpp40	84	80.351	Peromyscus_maniculatus_bairdii
ENSODEG00000006170	-	85	43.359	ENSPMAG00000008412	rpp40	92	43.359	Petromyzon_marinus
ENSODEG00000006170	-	100	75.920	ENSPCIG00000010682	RPP40	88	75.920	Phascolarctos_cinereus
ENSODEG00000006170	-	100	32.716	ENSPFOG00000011460	rpp40	88	32.716	Poecilia_formosa
ENSODEG00000006170	-	100	33.540	ENSPLAG00000001334	rpp40	89	33.540	Poecilia_latipinna
ENSODEG00000006170	-	100	33.230	ENSPMEG00000007721	rpp40	89	33.230	Poecilia_mexicana
ENSODEG00000006170	-	100	33.540	ENSPREG00000009215	rpp40	89	33.540	Poecilia_reticulata
ENSODEG00000006170	-	100	77.019	ENSPPYG00000016194	RPP40	89	77.019	Pongo_abelii
ENSODEG00000006170	-	100	82.609	ENSPCOG00000003907	RPP40	88	82.609	Propithecus_coquereli
ENSODEG00000006170	-	100	76.087	ENSPVAG00000011325	RPP40	89	76.087	Pteropus_vampyrus
ENSODEG00000006170	-	92	34.354	ENSPNYG00000004432	rpp40	98	34.354	Pundamilia_nyererei
ENSODEG00000006170	-	100	42.724	ENSPNAG00000019125	rpp40	89	42.724	Pygocentrus_nattereri
ENSODEG00000006170	-	100	75.466	ENSRNOG00000016226	Rpp40	100	74.587	Rattus_norvegicus
ENSODEG00000006170	-	100	83.612	ENSRBIG00000035800	RPP40	100	77.228	Rhinopithecus_bieti
ENSODEG00000006170	-	100	83.612	ENSRROG00000039116	RPP40	88	83.612	Rhinopithecus_roxellana
ENSODEG00000006170	-	100	81.940	ENSSBOG00000020297	RPP40	88	81.940	Saimiri_boliviensis_boliviensis
ENSODEG00000006170	-	84	74.206	ENSSHAG00000002102	RPP40	91	74.206	Sarcophilus_harrisii
ENSODEG00000006170	-	100	45.201	ENSSFOG00015001142	rpp40	72	45.201	Scleropages_formosus
ENSODEG00000006170	-	100	36.093	ENSSDUG00000007202	rpp40	88	36.093	Seriola_dumerili
ENSODEG00000006170	-	100	35.430	ENSSLDG00000017563	rpp40	88	35.430	Seriola_lalandi_dorsalis
ENSODEG00000006170	-	100	64.596	ENSSPUG00000017487	-	88	64.596	Sphenodon_punctatus
ENSODEG00000006170	-	91	61.356	ENSSPUG00000018950	-	100	61.356	Sphenodon_punctatus
ENSODEG00000006170	-	100	35.404	ENSSPAG00000022716	rpp40	89	35.404	Stegastes_partitus
ENSODEG00000006170	-	100	73.913	ENSSSCG00000000998	RPP40	100	72.937	Sus_scrofa
ENSODEG00000006170	-	100	63.665	ENSTGUG00000002258	-	90	63.665	Taeniopygia_guttata
ENSODEG00000006170	-	59	70.621	ENSTGUG00000015246	-	100	70.621	Taeniopygia_guttata
ENSODEG00000006170	-	100	35.093	ENSTRUG00000003755	rpp40	89	35.093	Takifugu_rubripes
ENSODEG00000006170	-	100	33.851	ENSTNIG00000003077	rpp40	89	33.851	Tetraodon_nigroviridis
ENSODEG00000006170	-	84	58.000	ENSTBEG00000014467	-	73	58.000	Tupaia_belangeri
ENSODEG00000006170	-	100	73.913	ENSTTRG00000007319	RPP40	89	73.913	Tursiops_truncatus
ENSODEG00000006170	-	100	82.609	ENSUAMG00000002159	RPP40	100	75.908	Ursus_americanus
ENSODEG00000006170	-	100	76.708	ENSUMAG00000018639	RPP40	83	76.708	Ursus_maritimus
ENSODEG00000006170	-	78	64.844	ENSVPAG00000004652	-	89	64.844	Vicugna_pacos
ENSODEG00000006170	-	100	76.087	ENSVVUG00000005451	RPP40	89	76.087	Vulpes_vulpes
ENSODEG00000006170	-	95	53.521	ENSXETG00000017617	rpp40	78	53.521	Xenopus_tropicalis
ENSODEG00000006170	-	100	31.511	ENSXMAG00000024940	rpp40	87	31.511	Xiphophorus_maculatus