EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000006291 (Gene tree)
Gene ID: 101590746
Gene Symbol: SRRM4
Alias: KIAA1853|nSR100
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 167863 bases
Position: chrJH651594.1:4893275-5061137
Accession: 101590746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008429	SRRM_C	PF15230.6	1.2e-25	1	1
ENSODEP00000008428	SRRM_C	PF15230.6	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008554	SRRM4-201	1833	XM_004636238	ENSODEP00000008428	610 (aa)	XP_004636295	UPI000333B33B
ENSODET00000008555	SRRM4-202	1764	-	ENSODEP00000008429	587 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006291's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006291	SRRM4	85	91.379	ENSG00000139767	SRRM4	85	91.346	Homo_sapiens
ENSODEG00000006291	SRRM4	89	81.784	ENSAMEG00000016072	SRRM4	89	88.454	Ailuropoda_melanoleuca
ENSODEG00000006291	SRRM4	94	43.771	ENSACAG00000004139	SRRM4	88	50.280	Anolis_carolinensis
ENSODEG00000006291	SRRM4	85	88.123	ENSBTAG00000008676	SRRM4	86	88.077	Bos_taurus
ENSODEG00000006291	SRRM4	85	91.762	ENSCJAG00000009146	SRRM4	85	91.731	Callithrix_jacchus
ENSODEG00000006291	SRRM4	85	90.962	ENSCAFG00000023113	SRRM4	85	90.962	Canis_familiaris
ENSODEG00000006291	SRRM4	54	90.506	ENSCAFG00020018665	SRRM4	55	90.415	Canis_lupus_dingo
ENSODEG00000006291	SRRM4	80	74.310	ENSCHIG00000019151	SRRM4	57	89.206	Capra_hircus
ENSODEG00000006291	SRRM4	79	88.535	ENSTSYG00000012239	SRRM4	82	89.339	Carlito_syrichta
ENSODEG00000006291	SRRM4	88	87.716	ENSCAPG00000008729	SRRM4	88	93.978	Cavia_aperea
ENSODEG00000006291	SRRM4	85	94.434	ENSCPOG00000003544	SRRM4	85	94.412	Cavia_porcellus
ENSODEG00000006291	SRRM4	85	90.996	ENSCCAG00000022479	SRRM4	85	90.962	Cebus_capucinus
ENSODEG00000006291	SRRM4	85	90.421	ENSCATG00000036343	SRRM4	85	90.385	Cercocebus_atys
ENSODEG00000006291	SRRM4	85	95.769	ENSCLAG00000009764	SRRM4	85	95.761	Chinchilla_lanigera
ENSODEG00000006291	SRRM4	85	90.805	ENSCSAG00000002300	SRRM4	85	90.769	Chlorocebus_sabaeus
ENSODEG00000006291	SRRM4	85	60.813	ENSCPBG00000012293	SRRM4	87	62.477	Chrysemys_picta_bellii
ENSODEG00000006291	SRRM4	85	87.356	ENSCANG00000031719	SRRM4	85	87.500	Colobus_angolensis_palliatus
ENSODEG00000006291	SRRM4	85	83.430	ENSCGRG00001000544	Srrm4	86	85.356	Cricetulus_griseus_chok1gshd
ENSODEG00000006291	SRRM4	85	78.503	ENSCGRG00000006973	Srrm4	85	77.649	Cricetulus_griseus_crigri
ENSODEG00000006291	SRRM4	85	87.861	ENSDNOG00000000260	SRRM4	88	87.861	Dasypus_novemcinctus
ENSODEG00000006291	SRRM4	85	79.732	ENSDORG00000015243	Srrm4	87	80.000	Dipodomys_ordii
ENSODEG00000006291	SRRM4	84	90.329	ENSEASG00005008759	SRRM4	87	90.385	Equus_asinus_asinus
ENSODEG00000006291	SRRM4	84	90.522	ENSECAG00000021729	SRRM4	87	90.577	Equus_caballus
ENSODEG00000006291	SRRM4	84	90.716	ENSFCAG00000010536	SRRM4	83	90.769	Felis_catus
ENSODEG00000006291	SRRM4	65	59.277	ENSFALG00000007700	SRRM4	88	57.671	Ficedula_albicollis
ENSODEG00000006291	SRRM4	85	90.944	ENSFDAG00000007218	SRRM4	85	92.692	Fukomys_damarensis
ENSODEG00000006291	SRRM4	58	57.951	ENSGAGG00000017218	SRRM4	82	60.400	Gopherus_agassizii
ENSODEG00000006291	SRRM4	85	91.379	ENSGGOG00000005338	SRRM4	85	91.346	Gorilla_gorilla
ENSODEG00000006291	SRRM4	85	94.412	ENSHGLG00000007830	SRRM4	86	94.423	Heterocephalus_glaber_female
ENSODEG00000006291	SRRM4	76	86.653	ENSHGLG00100008549	SRRM4	61	88.328	Heterocephalus_glaber_male
ENSODEG00000006291	SRRM4	82	79.046	ENSSTOG00000026642	SRRM4	83	77.149	Ictidomys_tridecemlineatus
ENSODEG00000006291	SRRM4	80	87.712	ENSJJAG00000016448	Srrm4	83	86.598	Jaculus_jaculus
ENSODEG00000006291	SRRM4	85	87.452	ENSLAFG00000003731	SRRM4	84	86.923	Loxodonta_africana
ENSODEG00000006291	SRRM4	85	90.996	ENSMFAG00000041271	SRRM4	84	90.962	Macaca_fascicularis
ENSODEG00000006291	SRRM4	82	80.000	ENSMMUG00000021230	SRRM4	78	78.893	Macaca_mulatta
ENSODEG00000006291	SRRM4	85	90.805	ENSMNEG00000044154	SRRM4	84	90.769	Macaca_nemestrina
ENSODEG00000006291	SRRM4	85	90.613	ENSMLEG00000034455	SRRM4	85	90.577	Mandrillus_leucophaeus
ENSODEG00000006291	SRRM4	85	58.459	ENSMGAG00000009082	SRRM4	87	59.850	Meleagris_gallopavo
ENSODEG00000006291	SRRM4	85	83.044	ENSMAUG00000013203	Srrm4	86	84.971	Mesocricetus_auratus
ENSODEG00000006291	SRRM4	85	90.421	ENSMICG00000012386	SRRM4	85	90.385	Microcebus_murinus
ENSODEG00000006291	SRRM4	85	81.503	ENSMOCG00000006737	Srrm4	86	84.008	Microtus_ochrogaster
ENSODEG00000006291	SRRM4	84	57.829	ENSMODG00000015283	SRRM4	55	51.944	Monodelphis_domestica
ENSODEG00000006291	SRRM4	85	86.320	MGP_CAROLIEiJ_G0027638	Srrm4	85	85.549	Mus_caroli
ENSODEG00000006291	SRRM4	85	85.714	ENSMUSG00000063919	Srrm4	85	84.971	Mus_musculus
ENSODEG00000006291	SRRM4	85	84.586	MGP_PahariEiJ_G0024219	Srrm4	85	83.815	Mus_pahari
ENSODEG00000006291	SRRM4	85	85.934	MGP_SPRETEiJ_G0028637	Srrm4	85	85.164	Mus_spretus
ENSODEG00000006291	SRRM4	84	90.909	ENSMPUG00000002930	SRRM4	86	90.962	Mustela_putorius_furo
ENSODEG00000006291	SRRM4	85	89.293	ENSNGAG00000020807	Srrm4	86	89.251	Nannospalax_galili
ENSODEG00000006291	SRRM4	85	90.996	ENSNLEG00000000200	SRRM4	85	90.962	Nomascus_leucogenys
ENSODEG00000006291	SRRM4	84	81.905	ENSOPRG00000016981	SRRM4	77	81.250	Ochotona_princeps
ENSODEG00000006291	SRRM4	84	87.645	ENSOCUG00000004503	SRRM4	77	87.716	Oryctolagus_cuniculus
ENSODEG00000006291	SRRM4	85	90.421	ENSOGAG00000015431	SRRM4	85	90.385	Otolemur_garnettii
ENSODEG00000006291	SRRM4	85	88.314	ENSOARG00000002063	SRRM4	86	88.269	Ovis_aries
ENSODEG00000006291	SRRM4	81	89.749	ENSPPAG00000028134	SRRM4	84	90.546	Pan_paniscus
ENSODEG00000006291	SRRM4	84	90.716	ENSPPRG00000002659	SRRM4	84	90.769	Panthera_pardus
ENSODEG00000006291	SRRM4	85	91.379	ENSPTRG00000005517	SRRM4	85	91.346	Pan_troglodytes
ENSODEG00000006291	SRRM4	85	90.613	ENSPANG00000022544	SRRM4	99	90.392	Papio_anubis
ENSODEG00000006291	SRRM4	85	81.538	ENSPEMG00000001823	Srrm4	86	81.923	Peromyscus_maniculatus_bairdii
ENSODEG00000006291	SRRM4	81	78.407	ENSPCAG00000016401	SRRM4	68	79.158	Procavia_capensis
ENSODEG00000006291	SRRM4	85	91.379	ENSPCOG00000013803	SRRM4	86	91.346	Propithecus_coquereli
ENSODEG00000006291	SRRM4	81	87.238	ENSPVAG00000017487	SRRM4	85	89.916	Pteropus_vampyrus
ENSODEG00000006291	SRRM4	85	86.705	ENSRNOG00000001141	Srrm4	86	85.934	Rattus_norvegicus
ENSODEG00000006291	SRRM4	80	78.615	ENSRBIG00000040107	SRRM4	61	89.971	Rhinopithecus_bieti
ENSODEG00000006291	SRRM4	80	78.819	ENSRROG00000035868	SRRM4	61	90.544	Rhinopithecus_roxellana
ENSODEG00000006291	SRRM4	85	85.029	ENSSBOG00000035310	SRRM4	85	84.971	Saimiri_boliviensis_boliviensis
ENSODEG00000006291	SRRM4	78	66.461	ENSSHAG00000017330	SRRM4	87	64.257	Sarcophilus_harrisii
ENSODEG00000006291	SRRM4	64	82.965	ENSSARG00000012647	SRRM4	84	68.908	Sorex_araneus
ENSODEG00000006291	SRRM4	85	89.272	ENSSSCG00000009845	SRRM4	85	89.231	Sus_scrofa
ENSODEG00000006291	SRRM4	63	57.692	ENSTGUG00000009228	SRRM4	91	56.660	Taeniopygia_guttata
ENSODEG00000006291	SRRM4	68	81.609	ENSVPAG00000007937	SRRM4	63	87.786	Vicugna_pacos
ENSODEG00000006291	SRRM4	54	51.940	ENSXETG00000019934	SRRM4	97	49.346	Xenopus_tropicalis