EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006311 (Gene tree)
Gene ID: 101570252
Gene Symbol: -
Alias: -
Full Name: cleavage stimulation factor subunit 3-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 2120 bases
Position: chrJH651561.1:12365111-12367230
Accession: 101570252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008451	Suf	PF05843.14	1.1e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008578	-	1791	XM_012514946	ENSODEP00000008451	596 (aa)	XP_012370400	-

Gene Model

Click here to download ENSODEG00000006311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006311	-	97	87.264	ENSODEG00000016737	-	99	81.805

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006311	-	97	87.107	ENSG00000176102	CSTF3	98	97.674	Homo_sapiens
ENSODEG00000006311	-	97	79.560	ENSAPOG00000014054	cstf3	89	79.560	Acanthochromis_polyacanthus
ENSODEG00000006311	-	97	87.107	ENSAMEG00000007187	CSTF3	88	87.107	Ailuropoda_melanoleuca
ENSODEG00000006311	-	95	75.806	ENSACIG00000005539	cstf3	99	75.806	Amphilophus_citrinellus
ENSODEG00000006311	-	97	79.245	ENSAOCG00000010930	cstf3	89	79.245	Amphiprion_ocellaris
ENSODEG00000006311	-	97	79.245	ENSAPEG00000007903	cstf3	89	79.245	Amphiprion_percula
ENSODEG00000006311	-	97	79.560	ENSATEG00000000190	cstf3	89	79.560	Anabas_testudineus
ENSODEG00000006311	-	97	85.377	ENSAPLG00000007217	CSTF3	90	85.377	Anas_platyrhynchos
ENSODEG00000006311	-	97	83.648	ENSACAG00000002823	CSTF3	89	83.648	Anolis_carolinensis
ENSODEG00000006311	-	97	87.107	ENSANAG00000020699	CSTF3	99	88.871	Aotus_nancymaae
ENSODEG00000006311	-	97	79.245	ENSACLG00000007820	cstf3	89	79.245	Astatotilapia_calliptera
ENSODEG00000006311	-	95	81.774	ENSAMXG00000014198	cstf3	86	81.774	Astyanax_mexicanus
ENSODEG00000006311	-	97	87.107	ENSBTAG00000008617	CSTF3	94	87.107	Bos_taurus
ENSODEG00000006311	-	97	42.319	WBGene00006307	suf-1	90	42.319	Caenorhabditis_elegans
ENSODEG00000006311	-	97	87.107	ENSCJAG00000005533	CSTF3	99	88.871	Callithrix_jacchus
ENSODEG00000006311	-	97	87.107	ENSCAFG00000007264	CSTF3	89	87.107	Canis_familiaris
ENSODEG00000006311	-	97	87.107	ENSCAFG00020002715	CSTF3	99	81.662	Canis_lupus_dingo
ENSODEG00000006311	-	95	88.871	ENSCHIG00000016418	CSTF3	99	88.871	Capra_hircus
ENSODEG00000006311	-	97	86.950	ENSTSYG00000000451	CSTF3	99	88.710	Carlito_syrichta
ENSODEG00000006311	-	95	74.520	ENSCAPG00000010958	CSTF3	92	74.520	Cavia_aperea
ENSODEG00000006311	-	97	86.792	ENSCPOG00000005545	CSTF3	89	86.792	Cavia_porcellus
ENSODEG00000006311	-	97	87.107	ENSCCAG00000024790	CSTF3	99	88.871	Cebus_capucinus
ENSODEG00000006311	-	97	87.107	ENSCATG00000007080	CSTF3	99	88.871	Cercocebus_atys
ENSODEG00000006311	-	97	87.107	ENSCLAG00000016179	CSTF3	89	87.107	Chinchilla_lanigera
ENSODEG00000006311	-	81	96.928	ENSCHOG00000002497	CSTF3	69	96.928	Choloepus_hoffmanni
ENSODEG00000006311	-	97	85.377	ENSCPBG00000006753	CSTF3	89	85.377	Chrysemys_picta_bellii
ENSODEG00000006311	-	97	53.906	ENSCING00000006401	-	88	53.906	Ciona_intestinalis
ENSODEG00000006311	-	97	52.941	ENSCSAVG00000004851	-	100	43.939	Ciona_savignyi
ENSODEG00000006311	-	97	87.107	ENSCANG00000035468	CSTF3	99	88.871	Colobus_angolensis_palliatus
ENSODEG00000006311	-	97	86.792	ENSCGRG00001014773	Cstf3	89	86.792	Cricetulus_griseus_chok1gshd
ENSODEG00000006311	-	97	86.792	ENSCGRG00000004142	Cstf3	89	86.792	Cricetulus_griseus_crigri
ENSODEG00000006311	-	97	79.403	ENSCSEG00000014283	cstf3	89	79.403	Cynoglossus_semilaevis
ENSODEG00000006311	-	97	78.774	ENSCVAG00000019739	cstf3	89	78.774	Cyprinodon_variegatus
ENSODEG00000006311	-	97	78.774	ENSDARG00000018904	cstf3	89	78.774	Danio_rerio
ENSODEG00000006311	-	97	86.635	ENSDNOG00000007366	CSTF3	89	86.635	Dasypus_novemcinctus
ENSODEG00000006311	-	95	81.613	ENSDORG00000005898	Cstf3	86	81.613	Dipodomys_ordii
ENSODEG00000006311	-	97	49.317	FBgn0003559	su(f)	88	49.317	Drosophila_melanogaster
ENSODEG00000006311	-	92	89.799	ENSETEG00000017097	CSTF3	83	89.799	Echinops_telfairi
ENSODEG00000006311	-	81	71.881	ENSEBUG00000015459	cstf3	85	71.881	Eptatretus_burgeri
ENSODEG00000006311	-	97	87.107	ENSEASG00005019884	CSTF3	91	87.107	Equus_asinus_asinus
ENSODEG00000006311	-	97	87.107	ENSECAG00000023338	CSTF3	91	87.107	Equus_caballus
ENSODEG00000006311	-	97	80.975	ENSEEUG00000015167	CSTF3	89	80.975	Erinaceus_europaeus
ENSODEG00000006311	-	97	77.673	ENSELUG00000023393	cstf3	89	77.673	Esox_lucius
ENSODEG00000006311	-	97	87.264	ENSFCAG00000030711	CSTF3	89	87.264	Felis_catus
ENSODEG00000006311	-	97	85.377	ENSFALG00000010764	CSTF3	98	85.377	Ficedula_albicollis
ENSODEG00000006311	-	97	87.264	ENSFDAG00000012082	CSTF3	89	87.264	Fukomys_damarensis
ENSODEG00000006311	-	97	78.774	ENSFHEG00000020623	cstf3	89	78.774	Fundulus_heteroclitus
ENSODEG00000006311	-	97	77.708	ENSGMOG00000012275	cstf3	89	77.708	Gadus_morhua
ENSODEG00000006311	-	97	85.692	ENSGALG00000011685	CSTF3	89	85.692	Gallus_gallus
ENSODEG00000006311	-	97	79.245	ENSGAFG00000002181	cstf3	89	79.245	Gambusia_affinis
ENSODEG00000006311	-	97	78.774	ENSGACG00000015997	cstf3	89	78.774	Gasterosteus_aculeatus
ENSODEG00000006311	-	97	85.377	ENSGAGG00000006200	CSTF3	89	85.377	Gopherus_agassizii
ENSODEG00000006311	-	99	77.221	ENSGGOG00000026591	CSTF3	99	77.221	Gorilla_gorilla
ENSODEG00000006311	-	97	79.245	ENSHBUG00000016656	cstf3	89	79.245	Haplochromis_burtoni
ENSODEG00000006311	-	97	86.792	ENSHGLG00000017834	CSTF3	89	86.792	Heterocephalus_glaber_female
ENSODEG00000006311	-	97	86.792	ENSHGLG00100018042	CSTF3	89	86.792	Heterocephalus_glaber_male
ENSODEG00000006311	-	95	79.516	ENSHCOG00000015218	cstf3	87	79.516	Hippocampus_comes
ENSODEG00000006311	-	97	78.459	ENSIPUG00000013170	CSTF3	89	78.459	Ictalurus_punctatus
ENSODEG00000006311	-	97	87.107	ENSSTOG00000013306	CSTF3	89	87.107	Ictidomys_tridecemlineatus
ENSODEG00000006311	-	97	73.899	ENSJJAG00000018430	Cstf3	87	73.899	Jaculus_jaculus
ENSODEG00000006311	-	97	78.459	ENSKMAG00000010916	cstf3	89	78.459	Kryptolebias_marmoratus
ENSODEG00000006311	-	97	78.302	ENSLBEG00000002306	cstf3	89	78.302	Labrus_bergylta
ENSODEG00000006311	-	97	81.918	ENSLACG00000017296	CSTF3	89	81.918	Latimeria_chalumnae
ENSODEG00000006311	-	97	81.289	ENSLOCG00000004415	cstf3	89	81.289	Lepisosteus_oculatus
ENSODEG00000006311	-	97	86.792	ENSLAFG00000008712	CSTF3	89	86.792	Loxodonta_africana
ENSODEG00000006311	-	97	87.107	ENSMFAG00000029516	CSTF3	99	88.871	Macaca_fascicularis
ENSODEG00000006311	-	97	87.107	ENSMMUG00000002542	CSTF3	89	87.107	Macaca_mulatta
ENSODEG00000006311	-	97	87.107	ENSMNEG00000021807	CSTF3	99	88.871	Macaca_nemestrina
ENSODEG00000006311	-	97	87.107	ENSMLEG00000039594	CSTF3	99	88.871	Mandrillus_leucophaeus
ENSODEG00000006311	-	97	79.088	ENSMAMG00000020423	cstf3	100	73.692	Mastacembelus_armatus
ENSODEG00000006311	-	97	79.245	ENSMZEG00005012082	cstf3	88	80.806	Maylandia_zebra
ENSODEG00000006311	-	97	85.692	ENSMGAG00000001383	CSTF3	89	85.692	Meleagris_gallopavo
ENSODEG00000006311	-	97	86.635	ENSMAUG00000002487	Cstf3	89	86.635	Mesocricetus_auratus
ENSODEG00000006311	-	97	86.950	ENSMICG00000004784	CSTF3	99	88.710	Microcebus_murinus
ENSODEG00000006311	-	97	86.792	ENSMOCG00000017583	Cstf3	99	76.967	Microtus_ochrogaster
ENSODEG00000006311	-	97	79.088	ENSMMOG00000016026	cstf3	85	79.088	Mola_mola
ENSODEG00000006311	-	97	86.006	ENSMODG00000009745	-	89	86.006	Monodelphis_domestica
ENSODEG00000006311	-	95	76.452	ENSMODG00000025205	-	86	76.452	Monodelphis_domestica
ENSODEG00000006311	-	97	78.931	ENSMALG00000012050	cstf3	89	78.931	Monopterus_albus
ENSODEG00000006311	-	97	86.792	MGP_CAROLIEiJ_G0024026	Cstf3	89	86.792	Mus_caroli
ENSODEG00000006311	-	97	86.792	ENSMUSG00000027176	Cstf3	89	86.792	Mus_musculus
ENSODEG00000006311	-	97	86.792	MGP_PahariEiJ_G0025464	Cstf3	89	86.792	Mus_pahari
ENSODEG00000006311	-	97	86.792	MGP_SPRETEiJ_G0024939	Cstf3	89	86.792	Mus_spretus
ENSODEG00000006311	-	97	87.107	ENSMPUG00000011457	CSTF3	89	87.107	Mustela_putorius_furo
ENSODEG00000006311	-	97	83.962	ENSMLUG00000026022	-	89	83.962	Myotis_lucifugus
ENSODEG00000006311	-	97	86.950	ENSMLUG00000003073	-	89	86.950	Myotis_lucifugus
ENSODEG00000006311	-	97	86.792	ENSNGAG00000010677	Cstf3	89	86.792	Nannospalax_galili
ENSODEG00000006311	-	95	80.806	ENSNBRG00000007345	cstf3	99	80.806	Neolamprologus_brichardi
ENSODEG00000006311	-	97	87.107	ENSNLEG00000017901	CSTF3	99	88.871	Nomascus_leucogenys
ENSODEG00000006311	-	78	80.851	ENSMEUG00000005640	-	99	80.851	Notamacropus_eugenii
ENSODEG00000006311	-	67	93.333	ENSOPRG00000000199	-	63	93.333	Ochotona_princeps
ENSODEG00000006311	-	97	79.245	ENSONIG00000005563	cstf3	89	79.245	Oreochromis_niloticus
ENSODEG00000006311	-	97	85.266	ENSOANG00000015140	CSTF3	98	85.266	Ornithorhynchus_anatinus
ENSODEG00000006311	-	97	86.950	ENSOCUG00000015417	CSTF3	89	86.950	Oryctolagus_cuniculus
ENSODEG00000006311	-	97	79.088	ENSORLG00000009762	cstf3	89	79.088	Oryzias_latipes
ENSODEG00000006311	-	97	79.088	ENSORLG00020005540	cstf3	89	79.088	Oryzias_latipes_hni
ENSODEG00000006311	-	97	78.931	ENSORLG00015003551	cstf3	99	73.994	Oryzias_latipes_hsok
ENSODEG00000006311	-	100	77.226	ENSOMEG00000003848	cstf3	100	77.080	Oryzias_melastigma
ENSODEG00000006311	-	97	86.698	ENSOGAG00000010229	CSTF3	89	86.698	Otolemur_garnettii
ENSODEG00000006311	-	100	86.329	ENSOARG00000017271	CSTF3	100	86.329	Ovis_aries
ENSODEG00000006311	-	99	79.513	ENSPPAG00000027358	CSTF3	99	79.513	Pan_paniscus
ENSODEG00000006311	-	97	87.264	ENSPPRG00000016852	CSTF3	89	87.264	Panthera_pardus
ENSODEG00000006311	-	97	87.264	ENSPTIG00000008716	CSTF3	89	87.264	Panthera_tigris_altaica
ENSODEG00000006311	-	97	87.107	ENSPTRG00000003485	CSTF3	99	80.086	Pan_troglodytes
ENSODEG00000006311	-	97	87.107	ENSPANG00000013722	CSTF3	89	87.107	Papio_anubis
ENSODEG00000006311	-	97	80.189	ENSPKIG00000023648	cstf3	89	80.189	Paramormyrops_kingsleyae
ENSODEG00000006311	-	97	84.906	ENSPSIG00000009173	CSTF3	89	84.906	Pelodiscus_sinensis
ENSODEG00000006311	-	70	80.258	ENSPMGG00000000164	cstf3	85	80.258	Periophthalmus_magnuspinnatus
ENSODEG00000006311	-	97	86.635	ENSPEMG00000011481	Cstf3	89	86.635	Peromyscus_maniculatus_bairdii
ENSODEG00000006311	-	95	72.419	ENSPMAG00000007282	cstf3	86	72.419	Petromyzon_marinus
ENSODEG00000006311	-	95	87.419	ENSPCIG00000026406	-	99	87.419	Phascolarctos_cinereus
ENSODEG00000006311	-	95	72.464	ENSPCIG00000030419	-	78	72.786	Phascolarctos_cinereus
ENSODEG00000006311	-	97	79.403	ENSPFOG00000017239	cstf3	89	79.403	Poecilia_formosa
ENSODEG00000006311	-	97	79.403	ENSPLAG00000009456	cstf3	89	79.403	Poecilia_latipinna
ENSODEG00000006311	-	97	79.403	ENSPMEG00000010320	cstf3	89	79.403	Poecilia_mexicana
ENSODEG00000006311	-	97	79.403	ENSPREG00000013549	cstf3	100	73.975	Poecilia_reticulata
ENSODEG00000006311	-	97	87.107	ENSPPYG00000003375	CSTF3	89	87.107	Pongo_abelii
ENSODEG00000006311	-	65	100.000	ENSPCAG00000008025	-	60	100.000	Procavia_capensis
ENSODEG00000006311	-	100	77.904	ENSPCOG00000014417	CSTF3	100	77.904	Propithecus_coquereli
ENSODEG00000006311	-	95	84.355	ENSPVAG00000002350	CSTF3	86	84.355	Pteropus_vampyrus
ENSODEG00000006311	-	97	79.245	ENSPNYG00000018259	cstf3	88	80.806	Pundamilia_nyererei
ENSODEG00000006311	-	97	79.717	ENSPNAG00000020182	cstf3	99	73.871	Pygocentrus_nattereri
ENSODEG00000006311	-	95	88.226	ENSRNOG00000012089	Cstf3	99	88.226	Rattus_norvegicus
ENSODEG00000006311	-	95	88.871	ENSRBIG00000044258	CSTF3	99	88.871	Rhinopithecus_bieti
ENSODEG00000006311	-	97	87.107	ENSRROG00000043450	CSTF3	99	88.871	Rhinopithecus_roxellana
ENSODEG00000006311	-	97	87.107	ENSSBOG00000024764	CSTF3	99	88.871	Saimiri_boliviensis_boliviensis
ENSODEG00000006311	-	95	76.737	ENSSHAG00000003135	-	86	76.737	Sarcophilus_harrisii
ENSODEG00000006311	-	97	85.849	ENSSHAG00000018128	-	89	85.849	Sarcophilus_harrisii
ENSODEG00000006311	-	97	80.031	ENSSFOG00015022133	cstf3	89	80.031	Scleropages_formosus
ENSODEG00000006311	-	97	78.616	ENSSMAG00000002197	cstf3	89	78.616	Scophthalmus_maximus
ENSODEG00000006311	-	97	79.403	ENSSDUG00000020426	cstf3	89	79.403	Seriola_dumerili
ENSODEG00000006311	-	97	79.403	ENSSLDG00000025649	cstf3	90	80.968	Seriola_lalandi_dorsalis
ENSODEG00000006311	-	97	86.950	ENSSARG00000000391	CSTF3	89	86.950	Sorex_araneus
ENSODEG00000006311	-	97	84.748	ENSSPUG00000010546	CSTF3	92	84.748	Sphenodon_punctatus
ENSODEG00000006311	-	97	79.403	ENSSPAG00000004958	cstf3	89	79.403	Stegastes_partitus
ENSODEG00000006311	-	97	86.950	ENSSSCG00000040954	CSTF3	89	86.950	Sus_scrofa
ENSODEG00000006311	-	97	85.377	ENSTGUG00000005010	CSTF3	90	85.377	Taeniopygia_guttata
ENSODEG00000006311	-	97	78.459	ENSTRUG00000004959	cstf3	89	78.459	Takifugu_rubripes
ENSODEG00000006311	-	97	79.088	ENSTNIG00000013811	cstf3	88	79.088	Tetraodon_nigroviridis
ENSODEG00000006311	-	97	83.648	ENSTBEG00000001544	CSTF3	89	83.648	Tupaia_belangeri
ENSODEG00000006311	-	97	85.466	ENSTTRG00000016366	CSTF3	89	85.466	Tursiops_truncatus
ENSODEG00000006311	-	97	87.107	ENSUMAG00000018971	CSTF3	99	88.871	Ursus_maritimus
ENSODEG00000006311	-	97	86.950	ENSVPAG00000007800	CSTF3	89	86.950	Vicugna_pacos
ENSODEG00000006311	-	97	87.107	ENSVVUG00000014938	CSTF3	99	88.871	Vulpes_vulpes
ENSODEG00000006311	-	92	72.712	ENSXETG00000021399	cstf3	98	71.689	Xenopus_tropicalis
ENSODEG00000006311	-	59	86.842	ENSXETG00000017946	-	84	86.842	Xenopus_tropicalis
ENSODEG00000006311	-	95	80.484	ENSXCOG00000011741	cstf3	99	80.484	Xiphophorus_couchianus
ENSODEG00000006311	-	97	79.403	ENSXMAG00000009545	cstf3	89	79.403	Xiphophorus_maculatus