EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000006328 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Minus strand
Length
26397 bases
Position
chrJH651594.1:6210480-6236876
Accession
101571080
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000008477RRM_1PF00076.222.8e-2912
ENSODEP00000008477RRM_1PF00076.222.8e-2922
ENSODEP00000008476RRM_1PF00076.226.5e-2912
ENSODEP00000008476RRM_1PF00076.226.5e-2922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000008604MSI1-2021017-ENSODEP00000008477338 (aa)--
ENSODET00000008603MSI1-2011009XM_012515793ENSODEP00000008476328 (aa)-UPI000C72ED3A
Gene Model
Click here to download ENSODEG00000006328's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006328's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000006328MSI15041.333ENSODEG00000008615-5241.060
ENSODEG00000006328MSI15038.554ENSODEG00000010232-6435.321
ENSODEG00000006328MSI15042.529ENSODEG00000001897HNRNPD7343.373
ENSODEG00000006328MSI15041.818ENSODEG00000006322-6938.863
ENSODEG00000006328MSI18434.426ENSODEG00000007980RBM385934.426
ENSODEG00000006328MSI15441.772ENSODEG00000013797DAZAP15241.772
ENSODEG00000006328MSI19968.807ENSODEG00000011974MSI29471.084
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000006328MSI1100100.000ENSG00000135097MSI198100.000Homo_sapiens
ENSODEG00000006328MSI110085.366ENSAPOG00000003191MSI19485.366Acanthochromis_polyacanthus
ENSODEG00000006328MSI110085.366ENSAPOG00000023458-9485.366Acanthochromis_polyacanthus
ENSODEG00000006328MSI110081.316ENSAMEG00000013302MSI110081.316Ailuropoda_melanoleuca
ENSODEG00000006328MSI19681.905ENSACIG00000017754-7881.905Amphilophus_citrinellus
ENSODEG00000006328MSI110085.366ENSAOCG00000003804MSI19485.366Amphiprion_ocellaris
ENSODEG00000006328MSI110076.524ENSAOCG00000009031-9576.829Amphiprion_ocellaris
ENSODEG00000006328MSI110085.366ENSAPEG00000006857-7985.366Amphiprion_percula
ENSODEG00000006328MSI110085.366ENSAPEG00000003245MSI19485.366Amphiprion_percula
ENSODEG00000006328MSI110082.371ENSATEG00000023779-9382.371Anabas_testudineus
ENSODEG00000006328MSI110085.061ENSATEG00000017059MSI19585.061Anabas_testudineus
ENSODEG00000006328MSI110096.951ENSACAG00000002762MSI19496.951Anolis_carolinensis
ENSODEG00000006328MSI1100100.000ENSANAG00000027151MSI198100.000Aotus_nancymaae
ENSODEG00000006328MSI18096.212ENSANAG00000027901-9296.212Aotus_nancymaae
ENSODEG00000006328MSI110084.756ENSACLG00000011230MSI19484.756Astatotilapia_calliptera
ENSODEG00000006328MSI110084.756ENSACLG00000000117-10084.756Astatotilapia_calliptera
ENSODEG00000006328MSI110083.841ENSAMXG00000038960msi17683.841Astyanax_mexicanus
ENSODEG00000006328MSI1100100.000ENSBTAG00000009800MSI1100100.000Bos_taurus
ENSODEG00000006328MSI1100100.000ENSCJAG00000008578MSI198100.000Callithrix_jacchus
ENSODEG00000006328MSI110099.695ENSCAFG00000010283MSI19899.695Canis_familiaris
ENSODEG00000006328MSI199100.000ENSCAFG00020020585MSI1100100.000Canis_lupus_dingo
ENSODEG00000006328MSI110094.030ENSCHIG00000024304MSI19894.030Capra_hircus
ENSODEG00000006328MSI199100.000ENSTSYG00000033949MSI195100.000Carlito_syrichta
ENSODEG00000006328MSI19989.776ENSCAPG00000003919MSI18989.776Cavia_aperea
ENSODEG00000006328MSI1100100.000ENSCPOG00000012361MSI1100100.000Cavia_porcellus
ENSODEG00000006328MSI1100100.000ENSCCAG00000035567MSI198100.000Cebus_capucinus
ENSODEG00000006328MSI1100100.000ENSCATG00000030019MSI198100.000Cercocebus_atys
ENSODEG00000006328MSI1100100.000ENSCLAG00000011329MSI1100100.000Chinchilla_lanigera
ENSODEG00000006328MSI17295.885ENSCSAG00000002265MSI18995.885Chlorocebus_sabaeus
ENSODEG00000006328MSI110096.037ENSCPBG00000011349MSI19496.037Chrysemys_picta_bellii
ENSODEG00000006328MSI1100100.000ENSCANG00000040651MSI1100100.000Colobus_angolensis_palliatus
ENSODEG00000006328MSI1100100.000ENSCGRG00001018883Msi198100.000Cricetulus_griseus_chok1gshd
ENSODEG00000006328MSI1100100.000ENSCGRG00000002191Msi173100.000Cricetulus_griseus_crigri
ENSODEG00000006328MSI110077.439ENSCSEG00000011032MSI110077.439Cynoglossus_semilaevis
ENSODEG00000006328MSI110085.061ENSCSEG00000005834-9485.061Cynoglossus_semilaevis
ENSODEG00000006328MSI110083.841ENSCSEG00000008352-9483.841Cynoglossus_semilaevis
ENSODEG00000006328MSI15148.837ENSCVAG00000017430zgc:1107969148.837Cyprinodon_variegatus
ENSODEG00000006328MSI17068.398ENSCVAG00000017463-8968.398Cyprinodon_variegatus
ENSODEG00000006328MSI110085.366ENSCVAG00000009100MSI19485.366Cyprinodon_variegatus
ENSODEG00000006328MSI110081.402ENSDARG00000010710msi110085.022Danio_rerio
ENSODEG00000006328MSI18882.096ENSDARG00000102015CABZ01037298.18982.096Danio_rerio
ENSODEG00000006328MSI110089.939ENSDNOG00000005713MSI19189.939Dasypus_novemcinctus
ENSODEG00000006328MSI1100100.000ENSDORG00000005610Msi193100.000Dipodomys_ordii
ENSODEG00000006328MSI110095.732ENSETEG00000004756MSI110095.732Echinops_telfairi
ENSODEG00000006328MSI1100100.000ENSEASG00005004736MSI198100.000Equus_asinus_asinus
ENSODEG00000006328MSI1100100.000ENSECAG00000017526MSI198100.000Equus_caballus
ENSODEG00000006328MSI110079.598ENSELUG00000023219MSI19279.598Esox_lucius
ENSODEG00000006328MSI110080.488ENSELUG00000023280-10080.183Esox_lucius
ENSODEG00000006328MSI1100100.000ENSFCAG00000011007MSI198100.000Felis_catus
ENSODEG00000006328MSI19995.820ENSFALG00000007574MSI110095.820Ficedula_albicollis
ENSODEG00000006328MSI110099.695ENSFDAG00000019586MSI110099.695Fukomys_damarensis
ENSODEG00000006328MSI110085.366ENSFHEG00000003560-9485.366Fundulus_heteroclitus
ENSODEG00000006328MSI110085.671ENSFHEG00000022446MSI19485.671Fundulus_heteroclitus
ENSODEG00000006328MSI110076.829ENSGMOG00000017838-9076.829Gadus_morhua
ENSODEG00000006328MSI110082.927ENSGMOG00000001006MSI19482.622Gadus_morhua
ENSODEG00000006328MSI19995.238ENSGALG00000007227MSI19686.275Gallus_gallus
ENSODEG00000006328MSI110068.389ENSGAFG00000005860-8968.389Gambusia_affinis
ENSODEG00000006328MSI110084.756ENSGAFG00000021522MSI19484.756Gambusia_affinis
ENSODEG00000006328MSI110084.146ENSGACG00000012679MSI19484.146Gasterosteus_aculeatus
ENSODEG00000006328MSI110081.098ENSGACG00000008674-9481.098Gasterosteus_aculeatus
ENSODEG00000006328MSI110096.037ENSGAGG00000016037MSI19496.037Gopherus_agassizii
ENSODEG00000006328MSI199100.000ENSGGOG00000010328MSI1100100.000Gorilla_gorilla
ENSODEG00000006328MSI110084.756ENSHBUG00000011841-9484.756Haplochromis_burtoni
ENSODEG00000006328MSI110084.756ENSHBUG00000021921MSI19484.756Haplochromis_burtoni
ENSODEG00000006328MSI110099.695ENSHGLG00000012782MSI19899.695Heterocephalus_glaber_female
ENSODEG00000006328MSI110099.695ENSHGLG00100016848MSI110099.695Heterocephalus_glaber_male
ENSODEG00000006328MSI110083.841ENSHCOG00000012067-8983.841Hippocampus_comes
ENSODEG00000006328MSI110080.183ENSHCOG00000012019MSI110080.183Hippocampus_comes
ENSODEG00000006328MSI110083.232ENSIPUG00000001976msi19979.573Ictalurus_punctatus
ENSODEG00000006328MSI199100.000ENSSTOG00000009799MSI1100100.000Ictidomys_tridecemlineatus
ENSODEG00000006328MSI1100100.000ENSJJAG00000010463Msi198100.000Jaculus_jaculus
ENSODEG00000006328MSI110082.927ENSJJAG00000010643-9482.622Jaculus_jaculus
ENSODEG00000006328MSI110084.451ENSKMAG00000011251MSI19484.451Kryptolebias_marmoratus
ENSODEG00000006328MSI110082.927ENSKMAG00000019877-10082.927Kryptolebias_marmoratus
ENSODEG00000006328MSI110084.756ENSLBEG00000008789MSI19484.756Labrus_bergylta
ENSODEG00000006328MSI110084.756ENSLBEG00000001375-9484.756Labrus_bergylta
ENSODEG00000006328MSI110086.890ENSLACG00000018287MSI110086.890Latimeria_chalumnae
ENSODEG00000006328MSI110089.394ENSLAFG00000009412MSI110089.394Loxodonta_africana
ENSODEG00000006328MSI1100100.000ENSMFAG00000001798MSI1100100.000Macaca_fascicularis
ENSODEG00000006328MSI1100100.000ENSMMUG00000031527MSI196100.000Macaca_mulatta
ENSODEG00000006328MSI1100100.000ENSMNEG00000040034MSI198100.000Macaca_nemestrina
ENSODEG00000006328MSI1100100.000ENSMLEG00000003921MSI1100100.000Mandrillus_leucophaeus
ENSODEG00000006328MSI110084.146ENSMAMG00000002279MSI19484.146Mastacembelus_armatus
ENSODEG00000006328MSI110085.366ENSMAMG00000018426-9485.366Mastacembelus_armatus
ENSODEG00000006328MSI110084.756ENSMZEG00005000340-9484.756Maylandia_zebra
ENSODEG00000006328MSI110084.756ENSMZEG00005026892MSI19484.756Maylandia_zebra
ENSODEG00000006328MSI16398.817ENSMGAG00000016518-10098.817Meleagris_gallopavo
ENSODEG00000006328MSI170100.000ENSMAUG00000016820Msi1100100.000Mesocricetus_auratus
ENSODEG00000006328MSI1100100.000ENSMICG00000033181MSI198100.000Microcebus_murinus
ENSODEG00000006328MSI110099.695ENSMOCG00000002286Msi19899.695Microtus_ochrogaster
ENSODEG00000006328MSI110082.012ENSMMOG00000012265-9982.012Mola_mola
ENSODEG00000006328MSI110075.305ENSMMOG00000010492MSI19675.305Mola_mola
ENSODEG00000006328MSI110067.674ENSMODG00000003189-10067.674Monodelphis_domestica
ENSODEG00000006328MSI110084.756ENSMALG00000017889MSI19484.756Monopterus_albus
ENSODEG00000006328MSI110084.451ENSMALG00000001426-10084.451Monopterus_albus
ENSODEG00000006328MSI110099.390MGP_CAROLIEiJ_G0027626Msi19899.390Mus_caroli
ENSODEG00000006328MSI110099.390ENSMUSG00000054256Msi19899.390Mus_musculus
ENSODEG00000006328MSI110099.085MGP_PahariEiJ_G0024206Msi19899.085Mus_pahari
ENSODEG00000006328MSI110099.390MGP_SPRETEiJ_G0028624Msi19899.390Mus_spretus
ENSODEG00000006328MSI199100.000ENSMPUG00000003168MSI1100100.000Mustela_putorius_furo
ENSODEG00000006328MSI110090.149ENSMLUG00000010313MSI110090.149Myotis_lucifugus
ENSODEG00000006328MSI1100100.000ENSNGAG00000014508Msi191100.000Nannospalax_galili
ENSODEG00000006328MSI110084.756ENSNBRG00000000841-9484.756Neolamprologus_brichardi
ENSODEG00000006328MSI19777.432ENSNBRG00000018012MSI19977.432Neolamprologus_brichardi
ENSODEG00000006328MSI110089.634ENSNLEG00000015636MSI110089.634Nomascus_leucogenys
ENSODEG00000006328MSI110077.744ENSMEUG00000015759MSI18098.305Notamacropus_eugenii
ENSODEG00000006328MSI19692.063ENSOPRG00000016879MSI110092.063Ochotona_princeps
ENSODEG00000006328MSI110085.061ENSONIG00000019452-9485.061Oreochromis_niloticus
ENSODEG00000006328MSI110084.756ENSONIG00000011182MSI19484.756Oreochromis_niloticus
ENSODEG00000006328MSI19999.678ENSOCUG00000027716MSI110099.678Oryctolagus_cuniculus
ENSODEG00000006328MSI110085.366ENSORLG00000029593MSI19485.366Oryzias_latipes
ENSODEG00000006328MSI110085.366ENSORLG00000019978-9485.366Oryzias_latipes
ENSODEG00000006328MSI110085.366ENSORLG00020008266MSI19982.317Oryzias_latipes_hni
ENSODEG00000006328MSI110085.366ENSORLG00020001208-6785.366Oryzias_latipes_hni
ENSODEG00000006328MSI110085.366ENSORLG00015013672-7181.707Oryzias_latipes_hsok
ENSODEG00000006328MSI110085.366ENSORLG00015003916MSI19982.317Oryzias_latipes_hsok
ENSODEG00000006328MSI110085.366ENSOMEG00000017536MSI110082.317Oryzias_melastigma
ENSODEG00000006328MSI110086.280ENSOMEG00000002272-9786.280Oryzias_melastigma
ENSODEG00000006328MSI110099.094ENSOGAG00000003847MSI19899.094Otolemur_garnettii
ENSODEG00000006328MSI110096.049ENSOARG00000012097MSI110096.049Ovis_aries
ENSODEG00000006328MSI1100100.000ENSPPAG00000043073MSI1100100.000Pan_paniscus
ENSODEG00000006328MSI1100100.000ENSPPRG00000000370MSI198100.000Panthera_pardus
ENSODEG00000006328MSI199100.000ENSPTIG00000008913MSI1100100.000Panthera_tigris_altaica
ENSODEG00000006328MSI1100100.000ENSPTRG00000005531MSI198100.000Pan_troglodytes
ENSODEG00000006328MSI110099.695ENSPANG00000006335MSI19899.695Papio_anubis
ENSODEG00000006328MSI110085.976ENSPKIG00000016497MSI19485.976Paramormyrops_kingsleyae
ENSODEG00000006328MSI110085.366ENSPKIG00000023575-9485.366Paramormyrops_kingsleyae
ENSODEG00000006328MSI110091.768ENSPSIG00000011608-9391.768Pelodiscus_sinensis
ENSODEG00000006328MSI18892.576ENSPSIG00000009621-10092.576Pelodiscus_sinensis
ENSODEG00000006328MSI19680.952ENSPMGG00000000514MSI19780.952Periophthalmus_magnuspinnatus
ENSODEG00000006328MSI110069.697ENSPMGG00000007743-9169.876Periophthalmus_magnuspinnatus
ENSODEG00000006328MSI110099.695ENSPEMG00000010491Msi19399.695Peromyscus_maniculatus_bairdii
ENSODEG00000006328MSI110085.366ENSPFOG00000013113MSI19485.366Poecilia_formosa
ENSODEG00000006328MSI110085.366ENSPFOG00000008319-8185.366Poecilia_formosa
ENSODEG00000006328MSI110085.366ENSPLAG00000014025-9485.366Poecilia_latipinna
ENSODEG00000006328MSI110085.366ENSPLAG00000012431-9185.366Poecilia_latipinna
ENSODEG00000006328MSI110084.756ENSPMEG00000007025-9377.134Poecilia_mexicana
ENSODEG00000006328MSI110085.366ENSPMEG00000012796MSI19485.366Poecilia_mexicana
ENSODEG00000006328MSI16878.571ENSPREG00000014574-10078.571Poecilia_reticulata
ENSODEG00000006328MSI110082.317ENSPREG00000021416-9482.317Poecilia_reticulata
ENSODEG00000006328MSI1100100.000ENSPPYG00000005027MSI198100.000Pongo_abelii
ENSODEG00000006328MSI19976.923ENSPCAG00000002300MSI110076.923Procavia_capensis
ENSODEG00000006328MSI1100100.000ENSPCOG00000017341MSI198100.000Propithecus_coquereli
ENSODEG00000006328MSI110082.927ENSPVAG00000002225MSI110082.927Pteropus_vampyrus
ENSODEG00000006328MSI110084.756ENSPNYG00000004379MSI19484.756Pundamilia_nyererei
ENSODEG00000006328MSI110084.756ENSPNYG00000002529-9484.756Pundamilia_nyererei
ENSODEG00000006328MSI110083.537ENSPNAG00000019337msi19483.537Pygocentrus_nattereri
ENSODEG00000006328MSI19999.678ENSRNOG00000001156Msi110099.678Rattus_norvegicus
ENSODEG00000006328MSI1100100.000ENSRBIG00000036889MSI1100100.000Rhinopithecus_bieti
ENSODEG00000006328MSI1100100.000ENSRROG00000041076MSI193100.000Rhinopithecus_roxellana
ENSODEG00000006328MSI1100100.000ENSSBOG00000030259MSI198100.000Saimiri_boliviensis_boliviensis
ENSODEG00000006328MSI19987.255ENSSHAG00000006834MSI110087.255Sarcophilus_harrisii
ENSODEG00000006328MSI110086.280ENSSFOG00015014964-9586.280Scleropages_formosus
ENSODEG00000006328MSI110087.500ENSSFOG00015005350MSI19687.500Scleropages_formosus
ENSODEG00000006328MSI19985.818ENSSMAG00000009156-7185.818Scophthalmus_maximus
ENSODEG00000006328MSI110082.012ENSSMAG00000018824MSI19782.012Scophthalmus_maximus
ENSODEG00000006328MSI110085.061ENSSDUG00000001027MSI19485.061Seriola_dumerili
ENSODEG00000006328MSI110085.061ENSSDUG00000022697-9485.061Seriola_dumerili
ENSODEG00000006328MSI110081.402ENSSLDG00000018706-9682.675Seriola_lalandi_dorsalis
ENSODEG00000006328MSI110085.061ENSSLDG00000016832MSI19485.061Seriola_lalandi_dorsalis
ENSODEG00000006328MSI110095.427ENSSPUG00000015741MSI110095.427Sphenodon_punctatus
ENSODEG00000006328MSI110085.671ENSSPAG00000013098-10085.671Stegastes_partitus
ENSODEG00000006328MSI16868.750ENSSPAG00000014085-10068.750Stegastes_partitus
ENSODEG00000006328MSI110099.695ENSSSCG00000029365MSI110099.678Sus_scrofa
ENSODEG00000006328MSI110096.646ENSTGUG00000009534MSI110096.646Taeniopygia_guttata
ENSODEG00000006328MSI19080.952ENSTRUG00000016249MSI110073.783Takifugu_rubripes
ENSODEG00000006328MSI110075.915ENSTRUG00000015636-7975.915Takifugu_rubripes
ENSODEG00000006328MSI110079.456ENSTNIG00000011469MSI19479.456Tetraodon_nigroviridis
ENSODEG00000006328MSI110060.819ENSTNIG00000019814-9560.819Tetraodon_nigroviridis
ENSODEG00000006328MSI19989.377ENSTBEG00000007182MSI110089.377Tupaia_belangeri
ENSODEG00000006328MSI110080.793ENSTTRG00000005663MSI110080.793Tursiops_truncatus
ENSODEG00000006328MSI17192.694ENSUAMG00000015514MSI19492.694Ursus_americanus
ENSODEG00000006328MSI19992.405ENSUMAG00000006176MSI19092.405Ursus_maritimus
ENSODEG00000006328MSI1100100.000ENSVVUG00000020993MSI1100100.000Vulpes_vulpes
ENSODEG00000006328MSI110091.793ENSXETG00000012216msi19591.843Xenopus_tropicalis
ENSODEG00000006328MSI110070.732ENSXCOG00000017605MSI18970.732Xiphophorus_couchianus
ENSODEG00000006328MSI110085.061ENSXMAG00000018237-9485.061Xiphophorus_maculatus
ENSODEG00000006328MSI110085.366ENSXMAG00000027103MSI19578.723Xiphophorus_maculatus

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