EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006408 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 392 bases
Position: chrJH651549.1:18103757-18104148
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008575	Ribosomal_S17	PF00366.20	1.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008702	-	333	-	ENSODEP00000008575	110 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006408's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006408	-	83	63.063	ENSODEG00000014911	-	99	63.063
ENSODEG00000006408	-	100	76.923	ENSODEG00000018639	-	100	76.923
ENSODEG00000006408	-	75	76.289	ENSODEG00000015145	-	100	76.289
ENSODEG00000006408	-	100	65.000	ENSODEG00000004346	-	100	65.000
ENSODEG00000006408	-	100	80.000	ENSODEG00000017232	-	100	80.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006408	-	100	70.000	ENSG00000239789	MRPS17	100	70.000	Homo_sapiens
ENSODEG00000006408	-	98	56.489	ENSAPOG00000000295	mrps17	81	56.489	Acanthochromis_polyacanthus
ENSODEG00000006408	-	100	66.154	ENSAMEG00000016161	-	95	66.154	Ailuropoda_melanoleuca
ENSODEG00000006408	-	92	57.258	ENSACIG00000019454	mrps17	90	57.258	Amphilophus_citrinellus
ENSODEG00000006408	-	98	55.725	ENSAOCG00000015138	mrps17	90	55.725	Amphiprion_ocellaris
ENSODEG00000006408	-	98	56.489	ENSAPEG00000017481	mrps17	90	56.489	Amphiprion_percula
ENSODEG00000006408	-	96	57.143	ENSATEG00000007899	mrps17	90	57.031	Anabas_testudineus
ENSODEG00000006408	-	98	59.701	ENSAPLG00000010523	-	98	59.701	Anas_platyrhynchos
ENSODEG00000006408	-	100	58.462	ENSANAG00000025061	-	100	58.462	Aotus_nancymaae
ENSODEG00000006408	-	64	57.778	ENSANAG00000030302	-	80	57.778	Aotus_nancymaae
ENSODEG00000006408	-	100	57.983	ENSANAG00000023853	-	100	57.983	Aotus_nancymaae
ENSODEG00000006408	-	98	58.015	ENSACLG00000007174	mrps17	90	58.015	Astatotilapia_calliptera
ENSODEG00000006408	-	96	54.264	ENSAMXG00000030410	mrps17	94	54.198	Astyanax_mexicanus
ENSODEG00000006408	-	100	65.385	ENSBTAG00000023186	-	100	65.385	Bos_taurus
ENSODEG00000006408	-	100	66.154	ENSBTAG00000007934	MRPS17	100	66.154	Bos_taurus
ENSODEG00000006408	-	100	66.154	ENSCJAG00000022938	-	100	66.154	Callithrix_jacchus
ENSODEG00000006408	-	100	63.077	ENSCJAG00000022879	-	100	63.077	Callithrix_jacchus
ENSODEG00000006408	-	100	65.385	ENSCJAG00000021291	-	100	65.385	Callithrix_jacchus
ENSODEG00000006408	-	100	68.462	ENSCAFG00000010098	-	92	68.462	Canis_familiaris
ENSODEG00000006408	-	100	68.462	ENSCAFG00020004866	-	100	68.462	Canis_lupus_dingo
ENSODEG00000006408	-	100	65.385	ENSCHIG00000014572	-	100	65.385	Capra_hircus
ENSODEG00000006408	-	100	67.692	ENSTSYG00000001260	-	100	67.692	Carlito_syrichta
ENSODEG00000006408	-	95	65.323	ENSCAPG00000006241	-	100	65.323	Cavia_aperea
ENSODEG00000006408	-	100	54.615	ENSCCAG00000037194	-	100	54.615	Cebus_capucinus
ENSODEG00000006408	-	100	67.692	ENSCCAG00000025426	-	100	67.692	Cebus_capucinus
ENSODEG00000006408	-	100	60.800	ENSCATG00000030575	-	100	60.800	Cercocebus_atys
ENSODEG00000006408	-	81	65.455	ENSCATG00000039682	-	100	65.455	Cercocebus_atys
ENSODEG00000006408	-	100	72.308	ENSCLAG00000007650	-	100	72.308	Chinchilla_lanigera
ENSODEG00000006408	-	100	64.615	ENSCSAG00000019470	-	100	64.615	Chlorocebus_sabaeus
ENSODEG00000006408	-	100	69.231	ENSCSAG00000016120	-	100	69.231	Chlorocebus_sabaeus
ENSODEG00000006408	-	100	65.385	ENSCHOG00000010576	-	100	65.385	Choloepus_hoffmanni
ENSODEG00000006408	-	63	56.180	ENSCHOG00000013255	-	100	56.180	Choloepus_hoffmanni
ENSODEG00000006408	-	100	57.353	ENSCPBG00000014888	-	99	57.353	Chrysemys_picta_bellii
ENSODEG00000006408	-	100	70.000	ENSCANG00000030538	-	100	70.000	Colobus_angolensis_palliatus
ENSODEG00000006408	-	100	64.000	ENSCANG00000035889	-	100	64.000	Colobus_angolensis_palliatus
ENSODEG00000006408	-	100	67.521	ENSCANG00000035780	-	94	67.521	Colobus_angolensis_palliatus
ENSODEG00000006408	-	98	67.969	ENSCGRG00001012873	Mrps17	99	67.969	Cricetulus_griseus_chok1gshd
ENSODEG00000006408	-	99	55.814	ENSCSEG00000018563	mrps17	85	55.814	Cynoglossus_semilaevis
ENSODEG00000006408	-	98	61.069	ENSCVAG00000006034	mrps17	90	61.069	Cyprinodon_variegatus
ENSODEG00000006408	-	98	59.542	ENSDARG00000054164	mrps17	96	59.542	Danio_rerio
ENSODEG00000006408	-	100	65.385	ENSDNOG00000014785	-	92	65.385	Dasypus_novemcinctus
ENSODEG00000006408	-	76	47.115	ENSEBUG00000010858	mrps17	62	47.115	Eptatretus_burgeri
ENSODEG00000006408	-	93	68.033	ENSEASG00005008885	-	100	68.033	Equus_asinus_asinus
ENSODEG00000006408	-	93	68.033	ENSECAG00000012583	-	100	68.033	Equus_caballus
ENSODEG00000006408	-	93	52.459	ENSECAG00000028191	-	100	52.459	Equus_caballus
ENSODEG00000006408	-	98	54.815	ENSELUG00000006708	mrps17	89	54.815	Esox_lucius
ENSODEG00000006408	-	100	68.462	ENSFCAG00000041039	-	100	68.462	Felis_catus
ENSODEG00000006408	-	97	60.150	ENSFALG00000006796	-	90	60.150	Ficedula_albicollis
ENSODEG00000006408	-	100	68.462	ENSFDAG00000001915	-	100	68.462	Fukomys_damarensis
ENSODEG00000006408	-	98	58.462	ENSFHEG00000023082	mrps17	90	58.462	Fundulus_heteroclitus
ENSODEG00000006408	-	67	81.081	ENSGMOG00000007056	mrps17	54	81.081	Gadus_morhua
ENSODEG00000006408	-	98	60.448	ENSGALG00000002379	MRPS17	98	60.448	Gallus_gallus
ENSODEG00000006408	-	98	54.962	ENSGAFG00000001727	mrps17	90	54.962	Gambusia_affinis
ENSODEG00000006408	-	98	57.143	ENSGACG00000020492	mrps17	95	57.143	Gasterosteus_aculeatus
ENSODEG00000006408	-	100	57.353	ENSGAGG00000022429	-	100	57.353	Gopherus_agassizii
ENSODEG00000006408	-	100	70.769	ENSGGOG00000039358	-	100	70.769	Gorilla_gorilla
ENSODEG00000006408	-	100	61.600	ENSGGOG00000044141	-	100	61.600	Gorilla_gorilla
ENSODEG00000006408	-	98	58.015	ENSHBUG00000006127	mrps17	90	58.015	Haplochromis_burtoni
ENSODEG00000006408	-	90	64.815	ENSHGLG00000010593	-	96	64.815	Heterocephalus_glaber_female
ENSODEG00000006408	-	90	64.815	ENSHGLG00100012532	-	96	64.815	Heterocephalus_glaber_male
ENSODEG00000006408	-	100	72.308	ENSHGLG00100010825	-	100	72.308	Heterocephalus_glaber_male
ENSODEG00000006408	-	98	53.077	ENSHCOG00000009491	mrps17	94	53.077	Hippocampus_comes
ENSODEG00000006408	-	98	54.962	ENSIPUG00000007844	MRPS17	94	54.962	Ictalurus_punctatus
ENSODEG00000006408	-	88	59.048	ENSJJAG00000022596	-	92	59.048	Jaculus_jaculus
ENSODEG00000006408	-	98	57.252	ENSKMAG00000006452	mrps17	90	57.252	Kryptolebias_marmoratus
ENSODEG00000006408	-	98	57.895	ENSLBEG00000000120	mrps17	91	57.895	Labrus_bergylta
ENSODEG00000006408	-	100	55.639	ENSLACG00000018908	mrps17	93	55.639	Latimeria_chalumnae
ENSODEG00000006408	-	98	55.725	ENSLOCG00000004118	mrps17	92	55.725	Lepisosteus_oculatus
ENSODEG00000006408	-	91	64.167	ENSLAFG00000027907	-	100	64.167	Loxodonta_africana
ENSODEG00000006408	-	100	70.769	ENSMFAG00000038594	-	100	70.769	Macaca_fascicularis
ENSODEG00000006408	-	100	58.462	ENSMMUG00000041709	-	94	58.462	Macaca_mulatta
ENSODEG00000006408	-	100	66.154	ENSMMUG00000000585	-	76	66.154	Macaca_mulatta
ENSODEG00000006408	-	100	70.769	ENSMNEG00000035442	-	100	70.769	Macaca_nemestrina
ENSODEG00000006408	-	100	70.000	ENSMLEG00000040782	-	100	70.000	Mandrillus_leucophaeus
ENSODEG00000006408	-	100	58.462	ENSMLEG00000011393	-	94	58.462	Mandrillus_leucophaeus
ENSODEG00000006408	-	98	57.143	ENSMAMG00000020981	mrps17	90	57.143	Mastacembelus_armatus
ENSODEG00000006408	-	98	58.015	ENSMZEG00005024876	mrps17	90	58.015	Maylandia_zebra
ENSODEG00000006408	-	98	60.448	ENSMGAG00000004317	-	98	60.448	Meleagris_gallopavo
ENSODEG00000006408	-	98	68.750	ENSMAUG00000021017	Mrps17	99	68.750	Mesocricetus_auratus
ENSODEG00000006408	-	100	68.462	ENSMICG00000046806	-	100	68.462	Microcebus_murinus
ENSODEG00000006408	-	85	58.772	ENSMOCG00000017721	-	86	58.772	Microtus_ochrogaster
ENSODEG00000006408	-	98	63.281	ENSMOCG00000008471	-	99	63.281	Microtus_ochrogaster
ENSODEG00000006408	-	98	58.647	ENSMMOG00000012804	mrps17	94	58.647	Mola_mola
ENSODEG00000006408	-	98	61.719	ENSMODG00000006523	-	99	61.719	Monodelphis_domestica
ENSODEG00000006408	-	98	58.779	ENSMALG00000018057	mrps17	90	58.779	Monopterus_albus
ENSODEG00000006408	-	97	62.205	MGP_CAROLIEiJ_G0027784	Mrps17	99	85.135	Mus_caroli
ENSODEG00000006408	-	97	62.205	ENSMUSG00000034211	Mrps17	99	85.135	Mus_musculus
ENSODEG00000006408	-	97	62.205	MGP_PahariEiJ_G0024399	Mrps17	99	85.135	Mus_pahari
ENSODEG00000006408	-	97	62.205	MGP_SPRETEiJ_G0028783	Mrps17	99	85.135	Mus_spretus
ENSODEG00000006408	-	100	67.692	ENSMPUG00000016230	-	70	67.692	Mustela_putorius_furo
ENSODEG00000006408	-	100	67.692	ENSMLUG00000016710	-	100	67.692	Myotis_lucifugus
ENSODEG00000006408	-	98	67.188	ENSNGAG00000020609	Mrps17	98	67.188	Nannospalax_galili
ENSODEG00000006408	-	98	57.252	ENSNBRG00000002238	mrps17	90	57.252	Neolamprologus_brichardi
ENSODEG00000006408	-	100	70.769	ENSNLEG00000032290	-	100	70.769	Nomascus_leucogenys
ENSODEG00000006408	-	99	61.240	ENSMEUG00000005143	-	100	61.240	Notamacropus_eugenii
ENSODEG00000006408	-	98	63.281	ENSOPRG00000009945	-	100	63.281	Ochotona_princeps
ENSODEG00000006408	-	98	59.091	ENSONIG00000008746	mrps17	90	59.091	Oreochromis_niloticus
ENSODEG00000006408	-	100	69.231	ENSOCUG00000001767	-	95	69.231	Oryctolagus_cuniculus
ENSODEG00000006408	-	100	69.231	ENSOCUG00000027419	-	100	69.231	Oryctolagus_cuniculus
ENSODEG00000006408	-	100	69.231	ENSOCUG00000024077	-	100	69.231	Oryctolagus_cuniculus
ENSODEG00000006408	-	98	59.542	ENSORLG00000002795	mrps17	90	59.542	Oryzias_latipes
ENSODEG00000006408	-	98	59.542	ENSORLG00020016792	mrps17	90	59.542	Oryzias_latipes_hni
ENSODEG00000006408	-	98	59.542	ENSORLG00015001149	mrps17	90	59.542	Oryzias_latipes_hsok
ENSODEG00000006408	-	96	58.915	ENSOMEG00000009095	mrps17	92	58.779	Oryzias_melastigma
ENSODEG00000006408	-	100	69.231	ENSOGAG00000010486	-	100	69.231	Otolemur_garnettii
ENSODEG00000006408	-	100	60.769	ENSOGAG00000009088	-	100	60.769	Otolemur_garnettii
ENSODEG00000006408	-	100	65.385	ENSOARG00000009925	-	88	65.385	Ovis_aries
ENSODEG00000006408	-	100	60.800	ENSPPAG00000038238	-	100	60.800	Pan_paniscus
ENSODEG00000006408	-	100	70.769	ENSPPAG00000036712	-	100	70.769	Pan_paniscus
ENSODEG00000006408	-	100	68.462	ENSPPRG00000000525	-	100	68.462	Panthera_pardus
ENSODEG00000006408	-	100	68.462	ENSPTIG00000019404	-	82	68.462	Panthera_tigris_altaica
ENSODEG00000006408	-	100	63.846	ENSPTRG00000051838	-	100	63.846	Pan_troglodytes
ENSODEG00000006408	-	100	62.400	ENSPTRG00000048604	-	100	62.400	Pan_troglodytes
ENSODEG00000006408	-	100	70.769	ENSPTRG00000043904	-	100	70.769	Pan_troglodytes
ENSODEG00000006408	-	100	66.923	ENSPTRG00000046133	-	94	66.923	Pan_troglodytes
ENSODEG00000006408	-	100	70.769	ENSPTRG00000019203	MRPS17	100	70.769	Pan_troglodytes
ENSODEG00000006408	-	100	70.769	ENSPANG00000015285	-	100	70.769	Papio_anubis
ENSODEG00000006408	-	87	54.054	ENSPANG00000030519	-	100	54.054	Papio_anubis
ENSODEG00000006408	-	96	50.388	ENSPKIG00000018389	mrps17	94	50.388	Paramormyrops_kingsleyae
ENSODEG00000006408	-	100	58.088	ENSPSIG00000013261	-	99	58.088	Pelodiscus_sinensis
ENSODEG00000006408	-	74	55.446	ENSPMAG00000006299	mrps17	65	55.446	Petromyzon_marinus
ENSODEG00000006408	-	96	52.713	ENSPFOG00000010719	mrps17	90	52.672	Poecilia_formosa
ENSODEG00000006408	-	96	52.713	ENSPLAG00000018054	mrps17	90	52.672	Poecilia_latipinna
ENSODEG00000006408	-	96	52.713	ENSPMEG00000014029	mrps17	90	52.672	Poecilia_mexicana
ENSODEG00000006408	-	98	51.908	ENSPREG00000009010	mrps17	92	51.908	Poecilia_reticulata
ENSODEG00000006408	-	100	70.769	ENSPPYG00000017547	-	100	70.769	Pongo_abelii
ENSODEG00000006408	-	100	67.692	ENSPCOG00000013668	-	100	67.692	Propithecus_coquereli
ENSODEG00000006408	-	67	59.574	ENSPCOG00000000608	-	85	59.574	Propithecus_coquereli
ENSODEG00000006408	-	100	67.692	ENSPVAG00000006305	-	99	67.692	Pteropus_vampyrus
ENSODEG00000006408	-	98	58.015	ENSPNYG00000018693	mrps17	90	58.015	Pundamilia_nyererei
ENSODEG00000006408	-	96	58.140	ENSPNAG00000015336	mrps17	79	58.015	Pygocentrus_nattereri
ENSODEG00000006408	-	97	62.205	ENSRNOG00000000926	Mrps17	100	62.205	Rattus_norvegicus
ENSODEG00000006408	-	100	57.037	ENSRNOG00000030847	AABR07012868.1	94	57.037	Rattus_norvegicus
ENSODEG00000006408	-	99	69.767	ENSRBIG00000032287	-	100	69.767	Rhinopithecus_bieti
ENSODEG00000006408	-	90	67.227	ENSRBIG00000032061	-	100	67.227	Rhinopithecus_bieti
ENSODEG00000006408	-	100	70.000	ENSRROG00000000039	-	100	70.000	Rhinopithecus_roxellana
ENSODEG00000006408	-	99	70.543	ENSRROG00000021955	-	100	70.543	Rhinopithecus_roxellana
ENSODEG00000006408	-	100	54.622	ENSSBOG00000030322	-	100	54.622	Saimiri_boliviensis_boliviensis
ENSODEG00000006408	-	99	57.364	ENSSBOG00000003355	-	99	57.364	Saimiri_boliviensis_boliviensis
ENSODEG00000006408	-	100	68.462	ENSSBOG00000025889	-	100	68.462	Saimiri_boliviensis_boliviensis
ENSODEG00000006408	-	98	63.281	ENSSHAG00000009749	-	99	63.281	Sarcophilus_harrisii
ENSODEG00000006408	-	96	50.781	ENSSFOG00015006180	mrps17	90	50.781	Scleropages_formosus
ENSODEG00000006408	-	98	55.639	ENSSMAG00000001680	mrps17	89	55.639	Scophthalmus_maximus
ENSODEG00000006408	-	98	55.639	ENSSDUG00000017736	mrps17	90	55.639	Seriola_dumerili
ENSODEG00000006408	-	98	55.639	ENSSLDG00000015517	mrps17	90	55.639	Seriola_lalandi_dorsalis
ENSODEG00000006408	-	100	57.353	ENSSPUG00000002623	-	99	57.353	Sphenodon_punctatus
ENSODEG00000006408	-	98	54.962	ENSSPAG00000008641	mrps17	90	54.962	Stegastes_partitus
ENSODEG00000006408	-	100	66.154	ENSSSCG00000007749	-	100	66.154	Sus_scrofa
ENSODEG00000006408	-	95	65.833	ENSSSCG00000034769	-	87	65.833	Sus_scrofa
ENSODEG00000006408	-	98	60.448	ENSTGUG00000005052	MRPS17	98	60.448	Taeniopygia_guttata
ENSODEG00000006408	-	96	55.725	ENSTRUG00000024068	mrps17	90	55.639	Takifugu_rubripes
ENSODEG00000006408	-	98	58.647	ENSTNIG00000016121	mrps17	90	58.647	Tetraodon_nigroviridis
ENSODEG00000006408	-	61	62.069	ENSTBEG00000007385	-	99	62.069	Tupaia_belangeri
ENSODEG00000006408	-	100	65.385	ENSTTRG00000015139	-	100	65.385	Tursiops_truncatus
ENSODEG00000006408	-	100	67.692	ENSUAMG00000002970	-	100	67.692	Ursus_americanus
ENSODEG00000006408	-	100	67.692	ENSUMAG00000015822	-	100	67.692	Ursus_maritimus
ENSODEG00000006408	-	100	67.692	ENSVVUG00000016664	-	100	67.692	Vulpes_vulpes
ENSODEG00000006408	-	95	55.200	ENSXETG00000010088	mrps17	89	55.200	Xenopus_tropicalis
ENSODEG00000006408	-	79	57.944	ENSXCOG00000009153	mrps17	84	57.944	Xiphophorus_couchianus
ENSODEG00000006408	-	96	54.264	ENSXMAG00000007366	mrps17	90	54.198	Xiphophorus_maculatus