EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006458 (Gene tree)
Gene ID: 101577733
Gene Symbol: -
Alias: -
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 31229 bases
Position: chrJH651603.1:1254564-1285792
Accession: 101577733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008641	FRG1	PF06229.12	5.8e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008769	-	861	XM_004637226	ENSODEP00000008641	257 (aa)	XP_004637283	UPI000333C335

Gene Model

Click here to download ENSODEG00000006458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006458's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006458	-	100	74.708	ENSODEG00000006953	-	100	73.152

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006458	-	100	97.287	ENSG00000109536	FRG1	100	99.138	Homo_sapiens
ENSODEG00000006458	-	100	72.763	ENSAPOG00000001060	frg1	100	73.930	Acanthochromis_polyacanthus
ENSODEG00000006458	-	100	98.450	ENSAMEG00000013503	FRG1	100	98.450	Ailuropoda_melanoleuca
ENSODEG00000006458	-	87	74.888	ENSACIG00000022283	frg1	98	74.886	Amphilophus_citrinellus
ENSODEG00000006458	-	87	74.888	ENSAOCG00000024240	frg1	85	74.886	Amphiprion_ocellaris
ENSODEG00000006458	-	100	71.984	ENSAPEG00000002486	frg1	100	73.152	Amphiprion_percula
ENSODEG00000006458	-	100	71.595	ENSATEG00000010414	frg1	100	71.206	Anabas_testudineus
ENSODEG00000006458	-	100	87.938	ENSAPLG00000007785	-	100	87.938	Anas_platyrhynchos
ENSODEG00000006458	-	100	81.712	ENSACAG00000006877	-	100	81.712	Anolis_carolinensis
ENSODEG00000006458	-	100	97.276	ENSANAG00000020876	FRG1	100	97.276	Aotus_nancymaae
ENSODEG00000006458	-	100	66.537	ENSACLG00000027065	frg1	100	65.385	Astatotilapia_calliptera
ENSODEG00000006458	-	100	75.097	ENSAMXG00000032700	frg1	100	75.097	Astyanax_mexicanus
ENSODEG00000006458	-	100	98.450	ENSBTAG00000007089	FRG1	100	98.450	Bos_taurus
ENSODEG00000006458	-	99	42.857	WBGene00014177	frg-1	82	43.421	Caenorhabditis_elegans
ENSODEG00000006458	-	100	97.276	ENSCJAG00000011272	FRG1	100	97.276	Callithrix_jacchus
ENSODEG00000006458	-	100	98.450	ENSCAFG00000007135	FRG1	100	98.450	Canis_familiaris
ENSODEG00000006458	-	91	94.017	ENSCAFG00020000082	-	91	94.017	Canis_lupus_dingo
ENSODEG00000006458	-	100	98.450	ENSCHIG00000011585	-	100	98.450	Capra_hircus
ENSODEG00000006458	-	98	70.356	ENSTSYG00000031599	-	100	68.379	Carlito_syrichta
ENSODEG00000006458	-	92	98.312	ENSCAPG00000016056	-	97	98.312	Cavia_aperea
ENSODEG00000006458	-	100	99.611	ENSCPOG00000022277	-	100	99.611	Cavia_porcellus
ENSODEG00000006458	-	100	97.276	ENSCCAG00000024627	FRG1	100	97.276	Cebus_capucinus
ENSODEG00000006458	-	100	97.287	ENSCATG00000029230	FRG1	100	97.287	Cercocebus_atys
ENSODEG00000006458	-	99	68.110	ENSCLAG00000009263	-	100	66.929	Chinchilla_lanigera
ENSODEG00000006458	-	100	82.171	ENSCLAG00000004960	-	100	82.171	Chinchilla_lanigera
ENSODEG00000006458	-	100	100.000	ENSCLAG00000000370	-	100	100.000	Chinchilla_lanigera
ENSODEG00000006458	-	100	67.315	ENSCLAG00000006068	-	100	65.370	Chinchilla_lanigera
ENSODEG00000006458	-	84	91.667	ENSCSAG00000017729	-	100	91.667	Chlorocebus_sabaeus
ENSODEG00000006458	-	100	97.287	ENSCSAG00000002899	FRG1	100	97.287	Chlorocebus_sabaeus
ENSODEG00000006458	-	88	87.556	ENSCPBG00000009211	-	85	88.584	Chrysemys_picta_bellii
ENSODEG00000006458	-	99	52.612	ENSCING00000005161	-	82	56.364	Ciona_intestinalis
ENSODEG00000006458	-	51	53.788	ENSCSAVG00000008018	-	72	53.788	Ciona_savignyi
ENSODEG00000006458	-	100	97.287	ENSCANG00000020991	FRG1	100	97.287	Colobus_angolensis_palliatus
ENSODEG00000006458	-	100	96.124	ENSCGRG00001014998	Frg1	100	96.124	Cricetulus_griseus_chok1gshd
ENSODEG00000006458	-	100	96.124	ENSCGRG00000011860	-	100	96.124	Cricetulus_griseus_crigri
ENSODEG00000006458	-	100	77.043	ENSCGRG00000003902	-	96	77.043	Cricetulus_griseus_crigri
ENSODEG00000006458	-	96	69.106	ENSCSEG00000015950	frg1	100	69.106	Cynoglossus_semilaevis
ENSODEG00000006458	-	100	71.984	ENSCVAG00000009985	frg1	100	71.984	Cyprinodon_variegatus
ENSODEG00000006458	-	100	75.097	ENSDARG00000056504	frg1	100	75.097	Danio_rerio
ENSODEG00000006458	-	100	96.899	ENSDNOG00000014886	FRG1	100	96.899	Dasypus_novemcinctus
ENSODEG00000006458	-	100	82.171	ENSDORG00000016190	Frg1	100	84.496	Dipodomys_ordii
ENSODEG00000006458	-	83	51.628	FBgn0036964	FRG1	81	51.628	Drosophila_melanogaster
ENSODEG00000006458	-	100	93.411	ENSETEG00000012349	-	100	91.860	Echinops_telfairi
ENSODEG00000006458	-	58	52.703	ENSEBUG00000012359	FRG1	70	63.158	Eptatretus_burgeri
ENSODEG00000006458	-	100	96.887	ENSEASG00005017497	FRG1	100	96.887	Equus_asinus_asinus
ENSODEG00000006458	-	100	96.887	ENSECAG00000003122	FRG1	100	96.887	Equus_caballus
ENSODEG00000006458	-	61	98.089	ENSEEUG00000000145	-	100	98.089	Erinaceus_europaeus
ENSODEG00000006458	-	100	73.930	ENSELUG00000021712	frg1	100	73.152	Esox_lucius
ENSODEG00000006458	-	100	98.450	ENSFCAG00000025737	FRG1	100	98.450	Felis_catus
ENSODEG00000006458	-	87	86.099	ENSFALG00000011231	-	85	87.215	Ficedula_albicollis
ENSODEG00000006458	-	100	86.538	ENSFDAG00000012697	-	98	92.056	Fukomys_damarensis
ENSODEG00000006458	-	100	98.833	ENSFDAG00000000962	-	100	98.833	Fukomys_damarensis
ENSODEG00000006458	-	100	69.650	ENSFHEG00000010540	frg1	100	70.039	Fundulus_heteroclitus
ENSODEG00000006458	-	100	70.039	ENSGMOG00000000867	frg1	100	70.039	Gadus_morhua
ENSODEG00000006458	-	100	85.603	ENSGALG00000013590	-	100	85.603	Gallus_gallus
ENSODEG00000006458	-	81	69.856	ENSGAFG00000013855	frg1	100	69.856	Gambusia_affinis
ENSODEG00000006458	-	100	71.595	ENSGACG00000016888	frg1	100	71.595	Gasterosteus_aculeatus
ENSODEG00000006458	-	100	85.992	ENSGAGG00000025012	-	100	85.992	Gopherus_agassizii
ENSODEG00000006458	-	69	85.393	ENSGGOG00000012888	-	90	85.393	Gorilla_gorilla
ENSODEG00000006458	-	100	64.341	ENSGGOG00000040796	-	100	62.500	Gorilla_gorilla
ENSODEG00000006458	-	100	71.206	ENSHBUG00000010667	frg1	100	71.595	Haplochromis_burtoni
ENSODEG00000006458	-	99	94.922	ENSHGLG00000020402	-	94	94.922	Heterocephalus_glaber_female
ENSODEG00000006458	-	100	98.833	ENSHGLG00000005601	FRG1	100	98.833	Heterocephalus_glaber_female
ENSODEG00000006458	-	100	80.934	ENSHGLG00000001211	-	100	80.934	Heterocephalus_glaber_female
ENSODEG00000006458	-	99	92.969	ENSHGLG00000020943	-	99	92.969	Heterocephalus_glaber_female
ENSODEG00000006458	-	100	76.654	ENSHGLG00100015285	-	100	76.654	Heterocephalus_glaber_male
ENSODEG00000006458	-	100	81.323	ENSHGLG00100010674	-	100	81.323	Heterocephalus_glaber_male
ENSODEG00000006458	-	99	92.969	ENSHGLG00100021211	-	99	92.969	Heterocephalus_glaber_male
ENSODEG00000006458	-	100	98.444	ENSHGLG00100016261	-	100	98.444	Heterocephalus_glaber_male
ENSODEG00000006458	-	87	71.749	ENSHCOG00000000224	frg1	94	72.273	Hippocampus_comes
ENSODEG00000006458	-	100	73.930	ENSIPUG00000022716	frg1	100	73.930	Ictalurus_punctatus
ENSODEG00000006458	-	100	96.899	ENSSTOG00000002857	-	100	96.899	Ictidomys_tridecemlineatus
ENSODEG00000006458	-	100	97.674	ENSJJAG00000020625	Frg1	100	97.674	Jaculus_jaculus
ENSODEG00000006458	-	100	70.428	ENSKMAG00000005841	frg1	100	70.039	Kryptolebias_marmoratus
ENSODEG00000006458	-	100	70.039	ENSLBEG00000001466	frg1	100	70.039	Labrus_bergylta
ENSODEG00000006458	-	100	69.847	ENSLACG00000010243	frg1	100	69.084	Latimeria_chalumnae
ENSODEG00000006458	-	100	74.708	ENSLOCG00000013868	frg1	100	77.043	Lepisosteus_oculatus
ENSODEG00000006458	-	100	96.124	ENSLAFG00000011191	FRG1	100	96.124	Loxodonta_africana
ENSODEG00000006458	-	83	87.442	ENSMFAG00000042873	-	89	87.442	Macaca_fascicularis
ENSODEG00000006458	-	100	97.287	ENSMFAG00000031178	FRG1	100	97.287	Macaca_fascicularis
ENSODEG00000006458	-	100	97.287	ENSMMUG00000001824	FRG1	100	97.287	Macaca_mulatta
ENSODEG00000006458	-	79	87.255	ENSMMUG00000047496	-	88	87.255	Macaca_mulatta
ENSODEG00000006458	-	96	89.069	ENSMNEG00000018620	FRG1	100	87.854	Macaca_nemestrina
ENSODEG00000006458	-	100	97.287	ENSMLEG00000028881	FRG1	100	97.287	Mandrillus_leucophaeus
ENSODEG00000006458	-	100	72.374	ENSMAMG00000012406	frg1	100	72.374	Mastacembelus_armatus
ENSODEG00000006458	-	100	70.817	ENSMZEG00005007549	frg1	100	71.206	Maylandia_zebra
ENSODEG00000006458	-	100	86.381	ENSMGAG00000011481	-	100	86.381	Meleagris_gallopavo
ENSODEG00000006458	-	100	96.899	ENSMAUG00000000847	Frg1	100	96.899	Mesocricetus_auratus
ENSODEG00000006458	-	100	98.062	ENSMICG00000046816	FRG1	100	98.062	Microcebus_murinus
ENSODEG00000006458	-	100	87.597	ENSMOCG00000023000	Frg1	100	86.434	Microtus_ochrogaster
ENSODEG00000006458	-	87	70.852	ENSMMOG00000004008	frg1	93	71.233	Mola_mola
ENSODEG00000006458	-	100	89.147	ENSMODG00000019031	-	87	89.147	Monodelphis_domestica
ENSODEG00000006458	-	100	72.374	ENSMALG00000018497	frg1	100	72.763	Monopterus_albus
ENSODEG00000006458	-	100	96.512	MGP_CAROLIEiJ_G0031006	Frg1	100	96.512	Mus_caroli
ENSODEG00000006458	-	100	96.512	ENSMUSG00000031590	Frg1	100	96.512	Mus_musculus
ENSODEG00000006458	-	100	96.124	MGP_PahariEiJ_G0021475	Frg1	100	96.124	Mus_pahari
ENSODEG00000006458	-	100	96.124	MGP_SPRETEiJ_G0032120	Frg1	100	96.124	Mus_spretus
ENSODEG00000006458	-	100	98.450	ENSMPUG00000017962	FRG1	100	98.450	Mustela_putorius_furo
ENSODEG00000006458	-	100	96.887	ENSMLUG00000023179	FRG1	100	96.887	Myotis_lucifugus
ENSODEG00000006458	-	100	97.287	ENSNGAG00000016411	Frg1	100	97.287	Nannospalax_galili
ENSODEG00000006458	-	81	67.464	ENSNBRG00000006806	frg1	95	66.509	Neolamprologus_brichardi
ENSODEG00000006458	-	79	86.139	ENSNLEG00000028874	-	91	86.139	Nomascus_leucogenys
ENSODEG00000006458	-	100	81.081	ENSNLEG00000032333	-	100	80.695	Nomascus_leucogenys
ENSODEG00000006458	-	100	82.375	ENSNLEG00000035849	-	100	82.375	Nomascus_leucogenys
ENSODEG00000006458	-	100	96.498	ENSNLEG00000000930	FRG1	100	96.498	Nomascus_leucogenys
ENSODEG00000006458	-	100	70.428	ENSNLEG00000032846	-	100	90.179	Nomascus_leucogenys
ENSODEG00000006458	-	79	87.129	ENSNLEG00000036059	-	86	87.129	Nomascus_leucogenys
ENSODEG00000006458	-	59	93.421	ENSMEUG00000007509	-	59	93.421	Notamacropus_eugenii
ENSODEG00000006458	-	100	79.767	ENSOPRG00000004722	-	100	79.767	Ochotona_princeps
ENSODEG00000006458	-	100	70.930	ENSONIG00000010162	frg1	100	71.318	Oreochromis_niloticus
ENSODEG00000006458	-	67	91.813	ENSOANG00000005659	-	76	91.813	Ornithorhynchus_anatinus
ENSODEG00000006458	-	100	98.450	ENSOCUG00000009038	-	100	98.450	Oryctolagus_cuniculus
ENSODEG00000006458	-	96	69.512	ENSORLG00000008106	frg1	89	69.512	Oryzias_latipes
ENSODEG00000006458	-	100	70.039	ENSORLG00020014355	frg1	100	70.039	Oryzias_latipes_hni
ENSODEG00000006458	-	100	70.039	ENSORLG00015014159	frg1	100	70.039	Oryzias_latipes_hsok
ENSODEG00000006458	-	84	69.907	ENSOMEG00000002468	frg1	88	70.833	Oryzias_melastigma
ENSODEG00000006458	-	100	96.512	ENSOGAG00000005749	-	100	96.512	Otolemur_garnettii
ENSODEG00000006458	-	100	95.785	ENSOARG00000008592	FRG1	100	95.785	Ovis_aries
ENSODEG00000006458	-	84	93.981	ENSPPAG00000043170	-	94	100.000	Pan_paniscus
ENSODEG00000006458	-	96	69.767	ENSPPAG00000043174	-	100	69.767	Pan_paniscus
ENSODEG00000006458	-	100	98.062	ENSPPRG00000025003	-	100	98.062	Panthera_pardus
ENSODEG00000006458	-	100	95.331	ENSPPRG00000019777	-	100	95.331	Panthera_pardus
ENSODEG00000006458	-	100	95.720	ENSPTIG00000006566	-	100	95.720	Panthera_tigris_altaica
ENSODEG00000006458	-	100	97.674	ENSPTIG00000006588	-	100	97.674	Panthera_tigris_altaica
ENSODEG00000006458	-	96	77.016	ENSPTRG00000044710	-	100	77.016	Pan_troglodytes
ENSODEG00000006458	-	95	77.459	ENSPTRG00000052363	-	94	95.050	Pan_troglodytes
ENSODEG00000006458	-	100	97.287	ENSPTRG00000016671	-	100	97.287	Pan_troglodytes
ENSODEG00000006458	-	100	97.287	ENSPTRG00000050205	-	100	97.287	Pan_troglodytes
ENSODEG00000006458	-	89	80.519	ENSPTRG00000043123	-	94	80.687	Pan_troglodytes
ENSODEG00000006458	-	96	74.597	ENSPTRG00000050204	-	100	74.597	Pan_troglodytes
ENSODEG00000006458	-	70	85.556	ENSPANG00000031530	-	84	83.889	Papio_anubis
ENSODEG00000006458	-	100	70.817	ENSPKIG00000024189	frg1	100	70.817	Paramormyrops_kingsleyae
ENSODEG00000006458	-	84	87.500	ENSPSIG00000017971	-	82	87.500	Pelodiscus_sinensis
ENSODEG00000006458	-	98	66.135	ENSPMGG00000019273	frg1	100	65.737	Periophthalmus_magnuspinnatus
ENSODEG00000006458	-	100	96.512	ENSPEMG00000000650	Frg1	100	96.512	Peromyscus_maniculatus_bairdii
ENSODEG00000006458	-	100	89.147	ENSPCIG00000007530	-	69	89.147	Phascolarctos_cinereus
ENSODEG00000006458	-	100	70.428	ENSPFOG00000006721	frg1	100	70.428	Poecilia_formosa
ENSODEG00000006458	-	100	70.817	ENSPMEG00000013816	frg1	100	70.817	Poecilia_mexicana
ENSODEG00000006458	-	100	70.039	ENSPREG00000000097	frg1	100	70.039	Poecilia_reticulata
ENSODEG00000006458	-	61	91.139	ENSPPYG00000011275	-	87	91.139	Pongo_abelii
ENSODEG00000006458	-	56	96.552	ENSPPYG00000029810	-	100	96.552	Pongo_abelii
ENSODEG00000006458	-	95	91.870	ENSPCAG00000014953	-	100	89.837	Procavia_capensis
ENSODEG00000006458	-	100	67.442	ENSPCOG00000022726	FRG1	100	67.442	Propithecus_coquereli
ENSODEG00000006458	-	100	82.946	ENSPVAG00000010551	FRG1	100	82.946	Pteropus_vampyrus
ENSODEG00000006458	-	67	74.269	ENSPNYG00000015209	frg1	74	74.269	Pundamilia_nyererei
ENSODEG00000006458	-	100	71.984	ENSPNAG00000013259	frg1	100	71.984	Pygocentrus_nattereri
ENSODEG00000006458	-	100	93.411	ENSRNOG00000009846	Frg1	100	92.248	Rattus_norvegicus
ENSODEG00000006458	-	87	94.222	ENSRBIG00000042219	-	94	92.889	Rhinopithecus_bieti
ENSODEG00000006458	-	83	90.610	ENSRROG00000032084	-	94	89.423	Rhinopithecus_roxellana
ENSODEG00000006458	-	100	94.186	ENSRROG00000015523	FRG1	100	94.186	Rhinopithecus_roxellana
ENSODEG00000006458	-	100	96.498	ENSSBOG00000034175	FRG1	100	96.498	Saimiri_boliviensis_boliviensis
ENSODEG00000006458	-	100	89.147	ENSSHAG00000005886	-	100	88.760	Sarcophilus_harrisii
ENSODEG00000006458	-	97	72.289	ENSSFOG00015021361	frg1	99	72.289	Scleropages_formosus
ENSODEG00000006458	-	100	70.428	ENSSMAG00000001213	frg1	100	69.650	Scophthalmus_maximus
ENSODEG00000006458	-	100	71.595	ENSSDUG00000018886	frg1	100	71.595	Seriola_dumerili
ENSODEG00000006458	-	100	70.817	ENSSLDG00000024191	frg1	100	70.817	Seriola_lalandi_dorsalis
ENSODEG00000006458	-	67	95.322	ENSSARG00000002471	-	91	95.322	Sorex_araneus
ENSODEG00000006458	-	100	79.457	ENSSPUG00000017326	-	96	83.732	Sphenodon_punctatus
ENSODEG00000006458	-	100	68.217	ENSSPAG00000013294	frg1	100	67.704	Stegastes_partitus
ENSODEG00000006458	-	100	97.674	ENSSSCG00000006996	FRG1	100	97.674	Sus_scrofa
ENSODEG00000006458	-	100	85.603	ENSTGUG00000007028	-	100	85.603	Taeniopygia_guttata
ENSODEG00000006458	-	100	70.039	ENSTRUG00000016208	frg1	100	71.206	Takifugu_rubripes
ENSODEG00000006458	-	100	70.039	ENSTNIG00000007128	frg1	100	70.817	Tetraodon_nigroviridis
ENSODEG00000006458	-	100	94.186	ENSTBEG00000014491	-	100	93.023	Tupaia_belangeri
ENSODEG00000006458	-	83	68.075	ENSTBEG00000012789	-	100	68.075	Tupaia_belangeri
ENSODEG00000006458	-	77	61.809	ENSTBEG00000017605	-	99	61.809	Tupaia_belangeri
ENSODEG00000006458	-	100	97.674	ENSTTRG00000003429	FRG1	100	97.674	Tursiops_truncatus
ENSODEG00000006458	-	96	89.837	ENSUAMG00000012123	-	100	89.837	Ursus_americanus
ENSODEG00000006458	-	100	98.450	ENSUMAG00000021119	FRG1	100	98.450	Ursus_maritimus
ENSODEG00000006458	-	92	97.458	ENSVPAG00000011977	-	99	97.458	Vicugna_pacos
ENSODEG00000006458	-	100	95.349	ENSVPAG00000000616	FRG1	100	95.349	Vicugna_pacos
ENSODEG00000006458	-	83	99.061	ENSVVUG00000007181	-	77	99.061	Vulpes_vulpes
ENSODEG00000006458	-	100	80.545	ENSXETG00000012470	frg1	100	80.545	Xenopus_tropicalis
ENSODEG00000006458	-	100	65.370	ENSXCOG00000005312	frg1	100	64.981	Xiphophorus_couchianus
ENSODEG00000006458	-	100	70.039	ENSXMAG00000007751	frg1	100	70.039	Xiphophorus_maculatus