EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006583 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 967 bases
Position: chrJH651627.1:4479964-4480930
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008805	Exo_endo_phos	PF03372.23	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008935	-	891	-	ENSODEP00000008805	296 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006583's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006583	-	100	75.000	ENSODEG00000001703	-	100	75.000
ENSODEG00000006583	-	97	61.688	ENSODEG00000004777	-	99	62.662

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006583	-	100	71.914	ENSG00000100823	APEX1	100	71.914	Homo_sapiens
ENSODEG00000006583	-	87	54.737	ENSAPOG00000017002	apex1	94	54.237	Acanthochromis_polyacanthus
ENSODEG00000006583	-	100	73.457	ENSAMEG00000005418	APEX1	100	73.457	Ailuropoda_melanoleuca
ENSODEG00000006583	-	86	55.634	ENSACIG00000010653	apex1	97	55.254	Amphilophus_citrinellus
ENSODEG00000006583	-	87	54.737	ENSAOCG00000009649	apex1	99	52.500	Amphiprion_ocellaris
ENSODEG00000006583	-	87	54.737	ENSAPEG00000021453	apex1	99	52.500	Amphiprion_percula
ENSODEG00000006583	-	85	55.160	ENSATEG00000002883	apex1	97	52.484	Anabas_testudineus
ENSODEG00000006583	-	100	52.454	ENSACAG00000008099	APEX1	100	53.963	Anolis_carolinensis
ENSODEG00000006583	-	100	70.988	ENSANAG00000030117	APEX1	100	72.222	Aotus_nancymaae
ENSODEG00000006583	-	86	55.319	ENSACLG00000018441	apex1	99	52.174	Astatotilapia_calliptera
ENSODEG00000006583	-	91	54.730	ENSAMXG00000034699	apex1	93	54.730	Astyanax_mexicanus
ENSODEG00000006583	-	100	71.605	ENSBTAG00000002745	APEX1	100	71.605	Bos_taurus
ENSODEG00000006583	-	88	33.793	WBGene00001372	exo-3	88	35.156	Caenorhabditis_elegans
ENSODEG00000006583	-	100	72.531	ENSCJAG00000009726	APEX1	100	72.531	Callithrix_jacchus
ENSODEG00000006583	-	100	70.988	ENSCAFG00000032033	APEX1	100	70.988	Canis_familiaris
ENSODEG00000006583	-	54	64.045	ENSCAFG00020023002	-	96	64.045	Canis_lupus_dingo
ENSODEG00000006583	-	100	70.988	ENSCAFG00020014377	-	100	70.988	Canis_lupus_dingo
ENSODEG00000006583	-	100	71.296	ENSCHIG00000007298	-	100	71.296	Capra_hircus
ENSODEG00000006583	-	98	59.748	ENSCHIG00000014537	-	99	59.748	Capra_hircus
ENSODEG00000006583	-	100	72.531	ENSTSYG00000034813	APEX1	100	72.531	Carlito_syrichta
ENSODEG00000006583	-	85	66.904	ENSCAPG00000016235	APEX1	99	70.930	Cavia_aperea
ENSODEG00000006583	-	100	74.074	ENSCPOG00000030909	APEX1	100	74.074	Cavia_porcellus
ENSODEG00000006583	-	100	68.671	ENSCCAG00000031931	-	100	68.671	Cebus_capucinus
ENSODEG00000006583	-	100	72.531	ENSCCAG00000033056	-	100	72.531	Cebus_capucinus
ENSODEG00000006583	-	100	71.914	ENSCATG00000015580	APEX1	100	71.914	Cercocebus_atys
ENSODEG00000006583	-	100	75.309	ENSCLAG00000001002	APEX1	100	75.309	Chinchilla_lanigera
ENSODEG00000006583	-	100	71.605	ENSCSAG00000016685	-	100	71.605	Chlorocebus_sabaeus
ENSODEG00000006583	-	100	71.605	ENSCSAG00000016670	-	100	71.605	Chlorocebus_sabaeus
ENSODEG00000006583	-	100	55.385	ENSCPBG00000009567	APEX1	100	55.385	Chrysemys_picta_bellii
ENSODEG00000006583	-	94	45.455	ENSCING00000008137	-	84	47.547	Ciona_intestinalis
ENSODEG00000006583	-	82	41.481	ENSCSAVG00000007144	-	100	41.699	Ciona_savignyi
ENSODEG00000006583	-	100	72.222	ENSCANG00000030726	APEX1	100	72.222	Colobus_angolensis_palliatus
ENSODEG00000006583	-	100	69.444	ENSCGRG00001017046	Apex1	100	69.444	Cricetulus_griseus_chok1gshd
ENSODEG00000006583	-	100	69.444	ENSCGRG00000008984	Apex1	100	69.444	Cricetulus_griseus_crigri
ENSODEG00000006583	-	99	51.393	ENSCSEG00000017499	apex1	99	51.393	Cynoglossus_semilaevis
ENSODEG00000006583	-	87	55.439	ENSCVAG00000022075	apex1	99	52.548	Cyprinodon_variegatus
ENSODEG00000006583	-	100	51.543	ENSDARG00000045843	apex1	100	51.543	Danio_rerio
ENSODEG00000006583	-	100	67.593	ENSDNOG00000042234	APEX1	95	67.593	Dasypus_novemcinctus
ENSODEG00000006583	-	100	72.840	ENSDORG00000001616	Apex1	100	72.840	Dipodomys_ordii
ENSODEG00000006583	-	100	70.988	ENSETEG00000004855	-	100	70.988	Echinops_telfairi
ENSODEG00000006583	-	73	54.237	ENSEBUG00000000622	-	91	54.237	Eptatretus_burgeri
ENSODEG00000006583	-	100	72.840	ENSEASG00005017489	APEX1	74	72.840	Equus_asinus_asinus
ENSODEG00000006583	-	100	72.840	ENSECAG00000022325	APEX1	82	72.840	Equus_caballus
ENSODEG00000006583	-	85	73.234	ENSEEUG00000012569	APEX1	95	72.857	Erinaceus_europaeus
ENSODEG00000006583	-	86	54.417	ENSELUG00000021706	apex1	100	51.852	Esox_lucius
ENSODEG00000006583	-	100	73.765	ENSFCAG00000030869	APEX1	100	73.765	Felis_catus
ENSODEG00000006583	-	100	73.457	ENSFDAG00000006120	APEX1	100	73.457	Fukomys_damarensis
ENSODEG00000006583	-	97	53.822	ENSFHEG00000009031	apex1	82	53.994	Fundulus_heteroclitus
ENSODEG00000006583	-	99	48.910	ENSGMOG00000007943	apex1	99	48.910	Gadus_morhua
ENSODEG00000006583	-	87	55.088	ENSGAFG00000005311	apex1	99	51.863	Gambusia_affinis
ENSODEG00000006583	-	87	53.684	ENSGACG00000019497	apex1	99	54.511	Gasterosteus_aculeatus
ENSODEG00000006583	-	100	55.077	ENSGAGG00000014999	APEX1	100	55.077	Gopherus_agassizii
ENSODEG00000006583	-	100	72.222	ENSGGOG00000002128	APEX1	100	72.222	Gorilla_gorilla
ENSODEG00000006583	-	86	54.965	ENSHBUG00000005894	apex1	99	51.553	Haplochromis_burtoni
ENSODEG00000006583	-	100	74.691	ENSHGLG00000002848	APEX1	100	74.691	Heterocephalus_glaber_female
ENSODEG00000006583	-	100	74.691	ENSHGLG00100017878	APEX1	100	74.691	Heterocephalus_glaber_male
ENSODEG00000006583	-	99	51.863	ENSHCOG00000009961	apex1	99	51.863	Hippocampus_comes
ENSODEG00000006583	-	100	52.308	ENSIPUG00000005799	apex1	100	53.231	Ictalurus_punctatus
ENSODEG00000006583	-	100	71.605	ENSSTOG00000010096	APEX1	100	71.605	Ictidomys_tridecemlineatus
ENSODEG00000006583	-	100	71.605	ENSJJAG00000012067	-	100	71.605	Jaculus_jaculus
ENSODEG00000006583	-	100	64.198	ENSJJAG00000003660	-	100	64.198	Jaculus_jaculus
ENSODEG00000006583	-	89	63.356	ENSJJAG00000020465	-	96	63.696	Jaculus_jaculus
ENSODEG00000006583	-	87	54.737	ENSKMAG00000021171	apex1	99	51.553	Kryptolebias_marmoratus
ENSODEG00000006583	-	87	52.632	ENSLBEG00000010248	apex1	99	51.097	Labrus_bergylta
ENSODEG00000006583	-	100	51.840	ENSLACG00000008617	APEX1	100	51.840	Latimeria_chalumnae
ENSODEG00000006583	-	100	52.439	ENSLOCG00000015516	apex1	99	52.439	Lepisosteus_oculatus
ENSODEG00000006583	-	100	70.679	ENSLAFG00000021872	APEX1	100	70.679	Loxodonta_africana
ENSODEG00000006583	-	100	71.914	ENSMFAG00000002565	APEX1	100	71.914	Macaca_fascicularis
ENSODEG00000006583	-	100	71.914	ENSMMUG00000048039	APEX1	100	71.914	Macaca_mulatta
ENSODEG00000006583	-	100	71.914	ENSMNEG00000036944	APEX1	100	71.914	Macaca_nemestrina
ENSODEG00000006583	-	100	71.914	ENSMLEG00000042125	APEX1	100	71.914	Mandrillus_leucophaeus
ENSODEG00000006583	-	87	54.386	ENSMAMG00000023526	apex1	99	52.484	Mastacembelus_armatus
ENSODEG00000006583	-	86	55.319	ENSMZEG00005014187	apex1	99	52.174	Maylandia_zebra
ENSODEG00000006583	-	100	70.370	ENSMAUG00000013994	Apex1	100	70.370	Mesocricetus_auratus
ENSODEG00000006583	-	100	72.222	ENSMICG00000043554	APEX1	100	72.222	Microcebus_murinus
ENSODEG00000006583	-	100	69.444	ENSMOCG00000013721	Apex1	100	69.444	Microtus_ochrogaster
ENSODEG00000006583	-	87	53.497	ENSMMOG00000010031	apex1	91	53.041	Mola_mola
ENSODEG00000006583	-	100	63.497	ENSMODG00000007125	APEX1	100	64.634	Monodelphis_domestica
ENSODEG00000006583	-	87	49.474	ENSMALG00000011699	apex1	77	49.153	Monopterus_albus
ENSODEG00000006583	-	99	70.279	MGP_CAROLIEiJ_G0019209	Apex1	99	70.279	Mus_caroli
ENSODEG00000006583	-	100	70.988	ENSMUSG00000035960	Apex1	100	70.988	Mus_musculus
ENSODEG00000006583	-	100	70.988	MGP_PahariEiJ_G0030232	Apex1	100	70.988	Mus_pahari
ENSODEG00000006583	-	100	70.988	MGP_SPRETEiJ_G0020101	Apex1	100	70.988	Mus_spretus
ENSODEG00000006583	-	100	72.086	ENSMLUG00000028957	APEX1	100	72.086	Myotis_lucifugus
ENSODEG00000006583	-	100	71.296	ENSNGAG00000002725	-	100	71.296	Nannospalax_galili
ENSODEG00000006583	-	99	61.000	ENSNGAG00000021748	-	94	61.000	Nannospalax_galili
ENSODEG00000006583	-	86	54.965	ENSNBRG00000005334	apex1	91	51.863	Neolamprologus_brichardi
ENSODEG00000006583	-	100	71.914	ENSNLEG00000010839	APEX1	100	71.914	Nomascus_leucogenys
ENSODEG00000006583	-	100	66.667	ENSMEUG00000014519	APEX1	100	66.667	Notamacropus_eugenii
ENSODEG00000006583	-	100	71.605	ENSOPRG00000014029	APEX1	100	71.605	Ochotona_princeps
ENSODEG00000006583	-	86	55.634	ENSONIG00000012089	apex1	99	52.484	Oreochromis_niloticus
ENSODEG00000006583	-	89	61.856	ENSOANG00000008836	APEX1	80	59.394	Ornithorhynchus_anatinus
ENSODEG00000006583	-	100	71.296	ENSOCUG00000005022	APEX1	100	71.296	Oryctolagus_cuniculus
ENSODEG00000006583	-	86	54.577	ENSORLG00000012378	apex1	99	52.469	Oryzias_latipes
ENSODEG00000006583	-	86	54.577	ENSORLG00020021371	apex1	99	52.469	Oryzias_latipes_hni
ENSODEG00000006583	-	86	54.577	ENSORLG00015020089	apex1	99	52.469	Oryzias_latipes_hsok
ENSODEG00000006583	-	99	52.160	ENSOMEG00000018876	apex1	99	52.469	Oryzias_melastigma
ENSODEG00000006583	-	98	66.879	ENSOGAG00000029355	-	100	66.879	Otolemur_garnettii
ENSODEG00000006583	-	100	72.222	ENSOGAG00000013335	-	100	72.222	Otolemur_garnettii
ENSODEG00000006583	-	99	63.043	ENSOARG00000014424	-	100	63.043	Ovis_aries
ENSODEG00000006583	-	100	70.988	ENSOARG00000019740	-	100	70.988	Ovis_aries
ENSODEG00000006583	-	96	69.435	ENSOARG00000001876	-	96	69.435	Ovis_aries
ENSODEG00000006583	-	100	72.222	ENSPPAG00000038760	APEX1	100	72.222	Pan_paniscus
ENSODEG00000006583	-	100	73.457	ENSPPRG00000011794	APEX1	100	73.457	Panthera_pardus
ENSODEG00000006583	-	100	73.765	ENSPTIG00000014829	APEX1	100	73.765	Panthera_tigris_altaica
ENSODEG00000006583	-	100	72.222	ENSPTRG00000006093	APEX1	100	72.222	Pan_troglodytes
ENSODEG00000006583	-	100	71.914	ENSPANG00000022757	APEX1	100	71.914	Papio_anubis
ENSODEG00000006583	-	86	53.357	ENSPKIG00000003504	apex1	92	53.220	Paramormyrops_kingsleyae
ENSODEG00000006583	-	75	53.527	ENSPMGG00000016596	apex1	72	53.527	Periophthalmus_magnuspinnatus
ENSODEG00000006583	-	100	70.370	ENSPEMG00000019097	Apex1	100	70.370	Peromyscus_maniculatus_bairdii
ENSODEG00000006583	-	94	50.980	ENSPMAG00000007275	-	99	51.307	Petromyzon_marinus
ENSODEG00000006583	-	100	63.692	ENSPCIG00000023274	APEX1	100	65.138	Phascolarctos_cinereus
ENSODEG00000006583	-	87	55.439	ENSPFOG00000004178	apex1	99	52.322	Poecilia_formosa
ENSODEG00000006583	-	87	55.439	ENSPLAG00000012779	apex1	99	52.632	Poecilia_latipinna
ENSODEG00000006583	-	87	55.439	ENSPMEG00000019623	apex1	99	52.322	Poecilia_mexicana
ENSODEG00000006583	-	87	55.088	ENSPREG00000014298	apex1	99	52.012	Poecilia_reticulata
ENSODEG00000006583	-	100	71.914	ENSPPYG00000005565	APEX1	100	71.914	Pongo_abelii
ENSODEG00000006583	-	100	69.444	ENSPCAG00000010376	APEX1	100	69.444	Procavia_capensis
ENSODEG00000006583	-	100	72.222	ENSPCOG00000021564	APEX1	100	72.222	Propithecus_coquereli
ENSODEG00000006583	-	100	72.086	ENSPVAG00000010736	APEX1	100	72.086	Pteropus_vampyrus
ENSODEG00000006583	-	86	55.319	ENSPNYG00000023940	apex1	99	52.174	Pundamilia_nyererei
ENSODEG00000006583	-	88	54.122	ENSPNAG00000020897	apex1	91	54.122	Pygocentrus_nattereri
ENSODEG00000006583	-	100	70.370	ENSRNOG00000009663	Apex1	100	70.370	Rattus_norvegicus
ENSODEG00000006583	-	100	71.914	ENSRBIG00000038325	APEX1	99	71.914	Rhinopithecus_bieti
ENSODEG00000006583	-	100	72.222	ENSSBOG00000018921	-	100	72.222	Saimiri_boliviensis_boliviensis
ENSODEG00000006583	-	100	63.272	ENSSBOG00000031372	-	100	63.551	Saimiri_boliviensis_boliviensis
ENSODEG00000006583	-	100	62.727	ENSSHAG00000013524	APEX1	100	63.554	Sarcophilus_harrisii
ENSODEG00000006583	-	86	52.297	ENSSFOG00015001948	apex1	100	49.691	Scleropages_formosus
ENSODEG00000006583	-	86	53.873	ENSSMAG00000013348	apex1	99	51.703	Scophthalmus_maximus
ENSODEG00000006583	-	87	54.035	ENSSDUG00000016377	apex1	99	51.242	Seriola_dumerili
ENSODEG00000006583	-	87	54.737	ENSSLDG00000023005	apex1	99	51.863	Seriola_lalandi_dorsalis
ENSODEG00000006583	-	94	55.375	ENSSPUG00000000531	APEX1	99	55.375	Sphenodon_punctatus
ENSODEG00000006583	-	87	54.386	ENSSPAG00000000458	apex1	99	51.274	Stegastes_partitus
ENSODEG00000006583	-	100	71.914	ENSSSCG00000040060	-	100	71.914	Sus_scrofa
ENSODEG00000006583	-	80	50.787	ENSSSCG00000039705	-	89	50.787	Sus_scrofa
ENSODEG00000006583	-	73	47.034	ENSTGUG00000014378	APEX1	100	47.034	Taeniopygia_guttata
ENSODEG00000006583	-	86	53.873	ENSTRUG00000004268	apex1	95	50.784	Takifugu_rubripes
ENSODEG00000006583	-	98	51.097	ENSTNIG00000005778	apex1	99	51.097	Tetraodon_nigroviridis
ENSODEG00000006583	-	100	70.186	ENSTBEG00000006405	APEX1	100	70.186	Tupaia_belangeri
ENSODEG00000006583	-	73	72.034	ENSTTRG00000007860	APEX1	100	72.034	Tursiops_truncatus
ENSODEG00000006583	-	100	73.148	ENSUAMG00000010457	APEX1	100	73.148	Ursus_americanus
ENSODEG00000006583	-	100	73.148	ENSUMAG00000009178	APEX1	100	73.148	Ursus_maritimus
ENSODEG00000006583	-	73	68.220	ENSVPAG00000005083	APEX1	100	68.220	Vicugna_pacos
ENSODEG00000006583	-	100	70.370	ENSVVUG00000009010	APEX1	100	70.370	Vulpes_vulpes
ENSODEG00000006583	-	100	51.368	ENSXETG00000024773	apex1	100	52.888	Xenopus_tropicalis
ENSODEG00000006583	-	87	55.439	ENSXCOG00000015233	apex1	99	52.351	Xiphophorus_couchianus
ENSODEG00000006583	-	93	52.716	ENSXMAG00000006195	apex1	99	52.351	Xiphophorus_maculatus