EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000006592 (Gene tree)
Gene ID
101588673
Gene Symbol
-
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Minus strand
Length
15784 bases
Position
chrJH651645.1:7194268-7210051
Accession
101588673
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000008823PABPPF00658.182.2e-3111
ENSODEP00000008822PABPPF00658.186.1e-2811
ENSODEP00000008821PABPPF00658.186.8e-2811
ENSODEP00000008823RRM_5PF13893.69.3e-0912
ENSODEP00000008823RRM_5PF13893.69.3e-0922
ENSODEP00000008822RRM_5PF13893.61e-0812
ENSODEP00000008822RRM_5PF13893.61e-0822
ENSODEP00000008821RRM_5PF13893.61.3e-0812
ENSODEP00000008821RRM_5PF13893.61.3e-0822
ENSODEP00000008823RRM_1PF00076.227.2e-9214
ENSODEP00000008823RRM_1PF00076.227.2e-9224
ENSODEP00000008823RRM_1PF00076.227.2e-9234
ENSODEP00000008823RRM_1PF00076.227.2e-9244
ENSODEP00000008822RRM_1PF00076.227.6e-9214
ENSODEP00000008822RRM_1PF00076.227.6e-9224
ENSODEP00000008822RRM_1PF00076.227.6e-9234
ENSODEP00000008822RRM_1PF00076.227.6e-9244
ENSODEP00000008821RRM_1PF00076.229.7e-9214
ENSODEP00000008821RRM_1PF00076.229.7e-9224
ENSODEP00000008821RRM_1PF00076.229.7e-9234
ENSODEP00000008821RRM_1PF00076.229.7e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000008952-1893XM_004641058ENSODEP00000008822630 (aa)--
ENSODET00000008953-1866-ENSODEP00000008823621 (aa)--
ENSODET00000008951-1980XM_004641056ENSODEP00000008821659 (aa)XP_004641113-
Gene Model
Click here to download ENSODEG00000006592's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006592's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000006592-9861.102ENSODEG00000015482PABPC1L9960.616
ENSODEG00000006592-6031.579ENSODEG00000002531ELAVL28934.940
ENSODEG00000006592-5485.714ENSODEG00000013457-10085.714
ENSODEG00000006592-5784.375ENSODEG00000002920-9784.375
ENSODEG00000006592-5531.646ENSODEG00000019566HNRNPA05032.450
ENSODEG00000006592-6032.099ENSODEG00000006770ELAVL49230.625
ENSODEG00000006592-5976.142ENSODEG00000018540-9976.142
ENSODEG00000006592-9989.733ENSODEG00000017434-10089.733
ENSODEG00000006592-9976.678ENSODEG00000003229PABPC19476.884
ENSODEG00000006592-5830.370ENSODEG00000009409TIA19430.189
ENSODEG00000006592-7873.760ENSODEG00000013269-9176.068
ENSODEG00000006592-5832.558ENSODEG00000014024-5031.776
ENSODEG00000006592-5937.500ENSODEG00000000887CELF26038.372
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000006592-10098.485ENSG00000090621PABPC4100100.000Homo_sapiens
ENSODEG00000006592-9982.726ENSAPOG00000001161pabpc410082.808Acanthochromis_polyacanthus
ENSODEG00000006592-10098.333ENSAMEG00000011535-10098.333Ailuropoda_melanoleuca
ENSODEG00000006592-9857.074ENSAMEG00000015083-9956.752Ailuropoda_melanoleuca
ENSODEG00000006592-10082.969ENSACIG00000023343pabpc410083.594Amphilophus_citrinellus
ENSODEG00000006592-9982.884ENSAOCG00000021529pabpc410090.583Amphiprion_ocellaris
ENSODEG00000006592-9982.884ENSAPEG00000019196pabpc410083.125Amphiprion_percula
ENSODEG00000006592-9982.278ENSATEG00000007402pabpc410082.527Anabas_testudineus
ENSODEG00000006592-9990.952ENSAPLG00000009729-10090.952Anas_platyrhynchos
ENSODEG00000006592-9989.803ENSACAG00000002544PABPC410089.803Anolis_carolinensis
ENSODEG00000006592-10098.333ENSANAG00000025079PABPC410098.333Aotus_nancymaae
ENSODEG00000006592-10082.656ENSACLG00000019558pabpc410083.048Astatotilapia_calliptera
ENSODEG00000006592-9978.922ENSAMXG00000018779pabpc49979.715Astyanax_mexicanus
ENSODEG00000006592-10095.915ENSBTAG00000017125PABPC410095.915Bos_taurus
ENSODEG00000006592-5886.826ENSBTAG00000048536-9886.826Bos_taurus
ENSODEG00000006592-7788.889ENSCJAG00000045953-9288.889Callithrix_jacchus
ENSODEG00000006592-10098.485ENSCJAG00000002512-10098.485Callithrix_jacchus
ENSODEG00000006592-10098.574ENSCAFG00000003081PABPC410098.574Canis_familiaris
ENSODEG00000006592-10098.485ENSCAFG00020004161PABPC410098.485Canis_lupus_dingo
ENSODEG00000006592-10098.333ENSCHIG00000019398-10098.333Capra_hircus
ENSODEG00000006592-10076.783ENSCHIG00000023385-10076.783Capra_hircus
ENSODEG00000006592-10098.788ENSTSYG00000006532PABPC410098.788Carlito_syrichta
ENSODEG00000006592-9998.632ENSCAPG00000015984PABPC410098.632Cavia_aperea
ENSODEG00000006592-10098.485ENSCPOG00000009552PABPC410098.485Cavia_porcellus
ENSODEG00000006592-10098.333ENSCCAG00000037306PABPC410098.333Cebus_capucinus
ENSODEG00000006592-10098.636ENSCATG00000042164PABPC410098.636Cercocebus_atys
ENSODEG00000006592-10099.091ENSCLAG00000011899PABPC410099.091Chinchilla_lanigera
ENSODEG00000006592-10098.636ENSCSAG00000001135PABPC410098.636Chlorocebus_sabaeus
ENSODEG00000006592-8897.625ENSCHOG00000005327PABPC48197.625Choloepus_hoffmanni
ENSODEG00000006592-9991.270ENSCPBG00000001038PABPC410091.270Chrysemys_picta_bellii
ENSODEG00000006592-9998.464ENSCANG00000034177PABPC410098.464Colobus_angolensis_palliatus
ENSODEG00000006592-10096.988ENSCGRG00001018166Pabpc410096.988Cricetulus_griseus_chok1gshd
ENSODEG00000006592-9894.860ENSCGRG00000009777Pabpc410094.198Cricetulus_griseus_crigri
ENSODEG00000006592-10081.875ENSCSEG00000000130pabpc410082.500Cynoglossus_semilaevis
ENSODEG00000006592-9983.148ENSCVAG00000019246pabpc410083.703Cyprinodon_variegatus
ENSODEG00000006592-9984.921ENSDARG00000059259pabpc410085.156Danio_rerio
ENSODEG00000006592-9998.393ENSDNOG00000018444-10098.393Dasypus_novemcinctus
ENSODEG00000006592-10096.212ENSDORG00000011581Pabpc410096.212Dipodomys_ordii
ENSODEG00000006592-100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSODEG00000006592-8664.630ENSETEG00000009172-9964.652Echinops_telfairi
ENSODEG00000006592-9776.252ENSEBUG00000013782pabpc49975.949Eptatretus_burgeri
ENSODEG00000006592-9975.791ENSEBUG00000000992pabpc49980.130Eptatretus_burgeri
ENSODEG00000006592-10098.636ENSEASG00005014119PABPC410098.636Equus_asinus_asinus
ENSODEG00000006592-10098.636ENSECAG00000009396PABPC410098.636Equus_caballus
ENSODEG00000006592-10095.455ENSEEUG00000002962PABPC410095.455Erinaceus_europaeus
ENSODEG00000006592-9983.121ENSELUG00000003195pabpc49883.703Esox_lucius
ENSODEG00000006592-10098.636ENSFCAG00000015254-10098.636Felis_catus
ENSODEG00000006592-9990.476ENSFALG00000000543PABPC410090.476Ficedula_albicollis
ENSODEG00000006592-10098.788ENSFDAG00000020016-10098.788Fukomys_damarensis
ENSODEG00000006592-9067.423ENSFDAG00000010581-10063.300Fukomys_damarensis
ENSODEG00000006592-10082.942ENSFHEG00000007548pabpc49390.807Fundulus_heteroclitus
ENSODEG00000006592-9982.177ENSGMOG00000019025pabpc49982.808Gadus_morhua
ENSODEG00000006592-9991.270ENSGALG00000003800PABPC410091.270Gallus_gallus
ENSODEG00000006592-9991.148ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSODEG00000006592-10081.250ENSGACG00000007179pabpc410081.931Gasterosteus_aculeatus
ENSODEG00000006592-9991.111ENSGAGG00000001888PABPC410091.111Gopherus_agassizii
ENSODEG00000006592-10098.485ENSGGOG00000004002PABPC410098.485Gorilla_gorilla
ENSODEG00000006592-10082.812ENSHBUG00000020206pabpc410083.204Haplochromis_burtoni
ENSODEG00000006592-10098.939ENSHGLG00000011162PABPC410098.939Heterocephalus_glaber_female
ENSODEG00000006592-10098.891ENSHGLG00100001580PABPC410098.891Heterocephalus_glaber_male
ENSODEG00000006592-10082.003ENSHCOG00000012694pabpc410082.473Hippocampus_comes
ENSODEG00000006592-9882.853ENSIPUG00000016620pabpc49981.960Ictalurus_punctatus
ENSODEG00000006592-10096.364ENSSTOG00000010416PABPC410096.364Ictidomys_tridecemlineatus
ENSODEG00000006592-10094.545ENSJJAG00000007781Pabpc410094.545Jaculus_jaculus
ENSODEG00000006592-9982.362ENSKMAG00000013597pabpc49982.512Kryptolebias_marmoratus
ENSODEG00000006592-10081.960ENSLBEG00000013654pabpc410081.988Labrus_bergylta
ENSODEG00000006592-9987.539ENSLACG00000011907PABPC410087.539Latimeria_chalumnae
ENSODEG00000006592-9985.039ENSLOCG00000001877pabpc49985.827Lepisosteus_oculatus
ENSODEG00000006592-10098.485ENSLAFG00000000151PABPC410098.485Loxodonta_africana
ENSODEG00000006592-10098.636ENSMFAG00000041481PABPC410098.636Macaca_fascicularis
ENSODEG00000006592-10098.636ENSMMUG00000007497PABPC410098.636Macaca_mulatta
ENSODEG00000006592-10098.636ENSMNEG00000043054PABPC410098.636Macaca_nemestrina
ENSODEG00000006592-10098.636ENSMLEG00000040716PABPC410098.636Mandrillus_leucophaeus
ENSODEG00000006592-9982.567ENSMAMG00000010025pabpc49982.540Mastacembelus_armatus
ENSODEG00000006592-10082.500ENSMZEG00005006141pabpc410082.893Maylandia_zebra
ENSODEG00000006592-9987.394ENSMGAG00000005408PABPC410087.394Meleagris_gallopavo
ENSODEG00000006592-7288.942ENSMAUG00000001295-9788.942Mesocricetus_auratus
ENSODEG00000006592-10080.368ENSMAUG00000019763-10080.368Mesocricetus_auratus
ENSODEG00000006592-5881.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSODEG00000006592-9981.736ENSMICG00000036729-10084.902Microcebus_murinus
ENSODEG00000006592-8995.730ENSMICG00000016633-10095.730Microcebus_murinus
ENSODEG00000006592-10097.289ENSMOCG00000006763Pabpc410097.289Microtus_ochrogaster
ENSODEG00000006592-10081.399ENSMMOG00000002363pabpc49982.935Mola_mola
ENSODEG00000006592-6073.729ENSMODG00000018051-9173.729Monodelphis_domestica
ENSODEG00000006592-9889.043ENSMODG00000017657-10088.636Monodelphis_domestica
ENSODEG00000006592-9982.148ENSMALG00000011017pabpc410082.171Monopterus_albus
ENSODEG00000006592-9983.051MGP_CAROLIEiJ_G0024864-10083.051Mus_caroli
ENSODEG00000006592-10096.970MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSODEG00000006592-10097.424ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSODEG00000006592-9997.389MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSODEG00000006592-9978.158MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSODEG00000006592-9653.630ENSMPUG00000006836-9953.465Mustela_putorius_furo
ENSODEG00000006592-10098.636ENSMPUG00000014414-10098.636Mustela_putorius_furo
ENSODEG00000006592-10095.880ENSMLUG00000012068PABPC410095.880Myotis_lucifugus
ENSODEG00000006592-10095.909ENSNGAG00000018292Pabpc410095.909Nannospalax_galili
ENSODEG00000006592-6092.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSODEG00000006592-6885.876ENSNBRG00000010047-7585.876Neolamprologus_brichardi
ENSODEG00000006592-10098.574ENSNLEG00000011928PABPC410098.574Nomascus_leucogenys
ENSODEG00000006592-8698.526ENSOPRG00000011984PABPC48798.526Ochotona_princeps
ENSODEG00000006592-10082.812ENSONIG00000008176pabpc410082.995Oreochromis_niloticus
ENSODEG00000006592-9990.794ENSOANG00000010001PABPC410090.794Ornithorhynchus_anatinus
ENSODEG00000006592-9698.571ENSOCUG00000000562PABPC48898.571Oryctolagus_cuniculus
ENSODEG00000006592-9991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSODEG00000006592-9991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSODEG00000006592-9991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSODEG00000006592-9982.567ENSOMEG00000014410pabpc49983.266Oryzias_melastigma
ENSODEG00000006592-10095.928ENSOGAG00000004067PABPC410095.928Otolemur_garnettii
ENSODEG00000006592-10098.333ENSOARG00000020060PABPC410098.333Ovis_aries
ENSODEG00000006592-10098.485ENSPPAG00000043625PABPC410098.485Pan_paniscus
ENSODEG00000006592-10098.636ENSPPRG00000024727PABPC410098.636Panthera_pardus
ENSODEG00000006592-10098.636ENSPTIG00000005829PABPC410098.636Panthera_tigris_altaica
ENSODEG00000006592-10098.485ENSPTRG00000000573PABPC410098.485Pan_troglodytes
ENSODEG00000006592-10098.788ENSPANG00000009484PABPC410098.788Papio_anubis
ENSODEG00000006592-9984.494ENSPKIG00000025356pabpc49985.127Paramormyrops_kingsleyae
ENSODEG00000006592-9991.270ENSPSIG00000016892PABPC410091.270Pelodiscus_sinensis
ENSODEG00000006592-10082.560ENSPMGG00000009073pabpc49982.297Periophthalmus_magnuspinnatus
ENSODEG00000006592-10090.455ENSPEMG00000024193-9990.455Peromyscus_maniculatus_bairdii
ENSODEG00000006592-10096.818ENSPEMG00000023569-9996.818Peromyscus_maniculatus_bairdii
ENSODEG00000006592-9771.908ENSPMAG00000007885pabpc410071.748Petromyzon_marinus
ENSODEG00000006592-8972.337ENSPMAG00000002836pabpc410073.196Petromyzon_marinus
ENSODEG00000006592-9893.795ENSPCIG00000020674PABPC410093.571Phascolarctos_cinereus
ENSODEG00000006592-10082.160ENSPFOG00000002682pabpc410082.919Poecilia_formosa
ENSODEG00000006592-10082.160ENSPLAG00000010112pabpc410083.178Poecilia_latipinna
ENSODEG00000006592-9982.671ENSPMEG00000019739pabpc410083.075Poecilia_mexicana
ENSODEG00000006592-10083.220ENSPREG00000001589pabpc410083.220Poecilia_reticulata
ENSODEG00000006592-10098.485ENSPPYG00000001506PABPC410098.485Pongo_abelii
ENSODEG00000006592-10093.636ENSPCAG00000003341PABPC410093.636Procavia_capensis
ENSODEG00000006592-9981.154ENSPCOG00000025882-9592.079Propithecus_coquereli
ENSODEG00000006592-10098.638ENSPCOG00000023725-10098.638Propithecus_coquereli
ENSODEG00000006592-9997.983ENSPVAG00000002187PABPC410097.983Pteropus_vampyrus
ENSODEG00000006592-10082.656ENSPNYG00000006134pabpc410083.048Pundamilia_nyererei
ENSODEG00000006592-10083.255ENSPNAG00000024355pabpc410083.619Pygocentrus_nattereri
ENSODEG00000006592-10093.030ENSRNOG00000028592AABR07035074.110093.030Rattus_norvegicus
ENSODEG00000006592-10095.152ENSRNOG00000015642Pabpc410095.152Rattus_norvegicus
ENSODEG00000006592-10098.636ENSRBIG00000039761PABPC410098.636Rhinopithecus_bieti
ENSODEG00000006592-10098.636ENSRROG00000033355PABPC410098.636Rhinopithecus_roxellana
ENSODEG00000006592-10098.485ENSSBOG00000026193PABPC410098.485Saimiri_boliviensis_boliviensis
ENSODEG00000006592-9892.071ENSSHAG00000018139PABPC410091.587Sarcophilus_harrisii
ENSODEG00000006592-9985.222ENSSFOG00015023514pabpc49984.142Scleropages_formosus
ENSODEG00000006592-9982.120ENSSMAG00000009007pabpc49982.616Scophthalmus_maximus
ENSODEG00000006592-9982.092ENSSDUG00000012683pabpc49587.816Seriola_dumerili
ENSODEG00000006592-9982.092ENSSLDG00000013025pabpc49785.366Seriola_lalandi_dorsalis
ENSODEG00000006592-10091.061ENSSARG00000000310PABPC410091.061Sorex_araneus
ENSODEG00000006592-9989.524ENSSPUG00000003204PABPC410089.524Sphenodon_punctatus
ENSODEG00000006592-9982.409ENSSPAG00000009252pabpc49990.135Stegastes_partitus
ENSODEG00000006592-8949.912ENSSSCG00000036170-9649.832Sus_scrofa
ENSODEG00000006592-10098.485ENSSSCG00000003660-10098.485Sus_scrofa
ENSODEG00000006592-9987.141ENSTGUG00000001266PABPC410087.141Taeniopygia_guttata
ENSODEG00000006592-10081.604ENSTRUG00000005907pabpc49982.003Takifugu_rubripes
ENSODEG00000006592-10079.100ENSTNIG00000016902pabpc49979.100Tetraodon_nigroviridis
ENSODEG00000006592-9987.563ENSTBEG00000009035PABPC410087.563Tupaia_belangeri
ENSODEG00000006592-9982.375ENSTTRG00000014340PABPC410086.218Tursiops_truncatus
ENSODEG00000006592-10098.415ENSUAMG00000000303PABPC410098.415Ursus_americanus
ENSODEG00000006592-10098.333ENSUMAG00000019585PABPC410098.333Ursus_maritimus
ENSODEG00000006592-8495.745ENSVPAG00000010041PABPC47795.745Vicugna_pacos
ENSODEG00000006592-10098.574ENSVVUG00000005215PABPC410098.574Vulpes_vulpes
ENSODEG00000006592-6497.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSODEG00000006592-9982.857ENSXETG00000010946pabpc410082.857Xenopus_tropicalis
ENSODEG00000006592-9989.974ENSXCOG00000013190pabpc49689.623Xiphophorus_couchianus
ENSODEG00000006592-10082.473ENSXMAG00000019007pabpc410083.022Xiphophorus_maculatus

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