EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000006623 (Gene tree)
Gene ID: 101560487
Gene Symbol: THOC1
Alias: -
Full Name: THO complex 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 36813 bases
Position: chrJH651590.1:3643195-3680007
Accession: 101560487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008861	efThoc1	PF11957.8	2.4e-123	1	2
ENSODEP00000008861	efThoc1	PF11957.8	2.4e-123	2	2
ENSODEP00000008862	efThoc1	PF11957.8	2e-122	1	2
ENSODEP00000008862	efThoc1	PF11957.8	2e-122	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000008993	THOC1-201	1863	XM_004635817	ENSODEP00000008861	620 (aa)	XP_004635874	-
ENSODET00000008994	THOC1-202	1857	-	ENSODEP00000008862	618 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006623's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006623	THOC1	100	90.563	ENSG00000079134	THOC1	99	95.203	Homo_sapiens
ENSODEG00000006623	THOC1	100	90.868	ENSAMEG00000006645	THOC1	99	90.868	Ailuropoda_melanoleuca
ENSODEG00000006623	THOC1	96	66.938	ENSACIG00000019392	thoc1	99	65.978	Amphilophus_citrinellus
ENSODEG00000006623	THOC1	98	64.000	ENSAOCG00000008391	thoc1	99	64.000	Amphiprion_ocellaris
ENSODEG00000006623	THOC1	98	67.638	ENSAPEG00000001093	thoc1	99	67.638	Amphiprion_percula
ENSODEG00000006623	THOC1	98	67.281	ENSATEG00000004783	thoc1	99	67.281	Anabas_testudineus
ENSODEG00000006623	THOC1	98	83.488	ENSAPLG00000016149	THOC1	98	83.488	Anas_platyrhynchos
ENSODEG00000006623	THOC1	99	82.398	ENSACAG00000008307	THOC1	98	81.003	Anolis_carolinensis
ENSODEG00000006623	THOC1	100	89.307	ENSANAG00000033200	THOC1	100	89.307	Aotus_nancymaae
ENSODEG00000006623	THOC1	98	67.178	ENSACLG00000016836	thoc1	99	67.178	Astatotilapia_calliptera
ENSODEG00000006623	THOC1	92	65.862	ENSAMXG00000014708	thoc1	97	65.862	Astyanax_mexicanus
ENSODEG00000006623	THOC1	100	90.259	ENSBTAG00000019215	THOC1	100	90.259	Bos_taurus
ENSODEG00000006623	THOC1	70	32.922	WBGene00020172	thoc-1	69	33.833	Caenorhabditis_elegans
ENSODEG00000006623	THOC1	100	90.411	ENSCJAG00000020450	THOC1	100	90.411	Callithrix_jacchus
ENSODEG00000006623	THOC1	100	90.715	ENSCAFG00000018324	THOC1	100	90.715	Canis_familiaris
ENSODEG00000006623	THOC1	100	90.715	ENSCAFG00020017894	THOC1	100	90.715	Canis_lupus_dingo
ENSODEG00000006623	THOC1	100	90.259	ENSCHIG00000015399	THOC1	100	90.259	Capra_hircus
ENSODEG00000006623	THOC1	100	90.868	ENSTSYG00000010585	THOC1	99	90.868	Carlito_syrichta
ENSODEG00000006623	THOC1	97	66.718	ENSCAPG00000016270	THOC1	99	66.359	Cavia_aperea
ENSODEG00000006623	THOC1	100	92.998	ENSCPOG00000000959	THOC1	100	92.998	Cavia_porcellus
ENSODEG00000006623	THOC1	100	90.411	ENSCCAG00000025766	THOC1	100	90.411	Cebus_capucinus
ENSODEG00000006623	THOC1	100	87.062	ENSCATG00000028180	THOC1	100	87.062	Cercocebus_atys
ENSODEG00000006623	THOC1	97	93.427	ENSCLAG00000009117	THOC1	100	93.427	Chinchilla_lanigera
ENSODEG00000006623	THOC1	100	90.563	ENSCSAG00000017631	THOC1	100	90.563	Chlorocebus_sabaeus
ENSODEG00000006623	THOC1	88	84.892	ENSCHOG00000010609	THOC1	89	84.892	Choloepus_hoffmanni
ENSODEG00000006623	THOC1	99	85.954	ENSCPBG00000027558	THOC1	99	85.954	Chrysemys_picta_bellii
ENSODEG00000006623	THOC1	72	45.842	ENSCING00000007663	-	99	46.012	Ciona_intestinalis
ENSODEG00000006623	THOC1	92	45.959	ENSCSAVG00000010649	-	99	45.166	Ciona_savignyi
ENSODEG00000006623	THOC1	100	90.411	ENSCANG00000034265	THOC1	100	90.411	Colobus_angolensis_palliatus
ENSODEG00000006623	THOC1	100	89.193	ENSCGRG00001016464	Thoc1	99	89.193	Cricetulus_griseus_chok1gshd
ENSODEG00000006623	THOC1	89	79.613	ENSCGRG00000003390	-	99	79.613	Cricetulus_griseus_crigri
ENSODEG00000006623	THOC1	98	89.302	ENSCGRG00000010269	-	100	89.515	Cricetulus_griseus_crigri
ENSODEG00000006623	THOC1	98	65.753	ENSCSEG00000012486	thoc1	99	67.042	Cynoglossus_semilaevis
ENSODEG00000006623	THOC1	98	67.025	ENSCVAG00000020600	thoc1	99	67.025	Cyprinodon_variegatus
ENSODEG00000006623	THOC1	98	68.817	ENSDARG00000088246	thoc1	99	68.817	Danio_rerio
ENSODEG00000006623	THOC1	100	90.715	ENSDNOG00000019217	THOC1	100	90.715	Dasypus_novemcinctus
ENSODEG00000006623	THOC1	99	90.839	ENSDORG00000008060	Thoc1	99	92.788	Dipodomys_ordii
ENSODEG00000006623	THOC1	92	34.195	FBgn0037382	Hpr1	74	38.722	Drosophila_melanogaster
ENSODEG00000006623	THOC1	90	69.295	ENSETEG00000004165	THOC1	100	69.295	Echinops_telfairi
ENSODEG00000006623	THOC1	91	59.900	ENSEBUG00000005998	thoc1	98	61.231	Eptatretus_burgeri
ENSODEG00000006623	THOC1	100	90.563	ENSEASG00005002549	THOC1	96	90.563	Equus_asinus_asinus
ENSODEG00000006623	THOC1	100	91.020	ENSECAG00000009267	THOC1	90	91.020	Equus_caballus
ENSODEG00000006623	THOC1	84	77.500	ENSEEUG00000012214	-	82	77.500	Erinaceus_europaeus
ENSODEG00000006623	THOC1	99	67.378	ENSELUG00000023277	thoc1	99	67.378	Esox_lucius
ENSODEG00000006623	THOC1	100	90.563	ENSFCAG00000022454	THOC1	87	90.563	Felis_catus
ENSODEG00000006623	THOC1	97	84.137	ENSFALG00000006205	THOC1	99	84.137	Ficedula_albicollis
ENSODEG00000006623	THOC1	98	92.581	ENSFDAG00000006842	THOC1	100	92.581	Fukomys_damarensis
ENSODEG00000006623	THOC1	98	66.411	ENSFHEG00000008841	thoc1	99	66.411	Fundulus_heteroclitus
ENSODEG00000006623	THOC1	99	67.176	ENSGMOG00000011486	thoc1	99	67.176	Gadus_morhua
ENSODEG00000006623	THOC1	99	83.866	ENSGALG00000014915	THOC1	99	83.107	Gallus_gallus
ENSODEG00000006623	THOC1	98	66.871	ENSGAFG00000021464	thoc1	99	66.871	Gambusia_affinis
ENSODEG00000006623	THOC1	100	66.616	ENSGACG00000017361	thoc1	100	66.616	Gasterosteus_aculeatus
ENSODEG00000006623	THOC1	99	85.540	ENSGAGG00000021230	-	98	85.540	Gopherus_agassizii
ENSODEG00000006623	THOC1	100	90.563	ENSGGOG00000003013	THOC1	99	90.563	Gorilla_gorilla
ENSODEG00000006623	THOC1	98	67.178	ENSHBUG00000009096	thoc1	99	67.178	Haplochromis_burtoni
ENSODEG00000006623	THOC1	100	92.237	ENSHGLG00000003712	-	100	92.237	Heterocephalus_glaber_female
ENSODEG00000006623	THOC1	77	91.192	ENSHGLG00000009264	-	99	91.192	Heterocephalus_glaber_female
ENSODEG00000006623	THOC1	100	92.390	ENSHGLG00100003570	THOC1	100	92.390	Heterocephalus_glaber_male
ENSODEG00000006623	THOC1	75	89.637	ENSHGLG00100002225	-	99	89.637	Heterocephalus_glaber_male
ENSODEG00000006623	THOC1	89	68.061	ENSIPUG00000005306	thoc1	99	67.871	Ictalurus_punctatus
ENSODEG00000006623	THOC1	100	91.324	ENSSTOG00000006484	THOC1	100	91.324	Ictidomys_tridecemlineatus
ENSODEG00000006623	THOC1	99	66.819	ENSKMAG00000003904	thoc1	99	66.819	Kryptolebias_marmoratus
ENSODEG00000006623	THOC1	98	67.331	ENSLBEG00000020372	thoc1	98	67.331	Labrus_bergylta
ENSODEG00000006623	THOC1	99	74.543	ENSLACG00000014869	THOC1	99	73.588	Latimeria_chalumnae
ENSODEG00000006623	THOC1	98	71.669	ENSLOCG00000002097	thoc1	99	71.012	Lepisosteus_oculatus
ENSODEG00000006623	THOC1	100	90.715	ENSLAFG00000009585	THOC1	100	90.715	Loxodonta_africana
ENSODEG00000006623	THOC1	100	90.563	ENSMFAG00000041520	THOC1	99	90.563	Macaca_fascicularis
ENSODEG00000006623	THOC1	100	90.563	ENSMMUG00000004662	THOC1	100	90.563	Macaca_mulatta
ENSODEG00000006623	THOC1	100	90.563	ENSMNEG00000040177	THOC1	99	90.563	Macaca_nemestrina
ENSODEG00000006623	THOC1	100	90.563	ENSMLEG00000034201	THOC1	99	90.563	Mandrillus_leucophaeus
ENSODEG00000006623	THOC1	94	67.363	ENSMAMG00000016747	thoc1	99	67.363	Mastacembelus_armatus
ENSODEG00000006623	THOC1	98	67.178	ENSMZEG00005024609	thoc1	99	67.178	Maylandia_zebra
ENSODEG00000006623	THOC1	97	83.956	ENSMGAG00000009811	THOC1	100	83.956	Meleagris_gallopavo
ENSODEG00000006623	THOC1	100	89.193	ENSMAUG00000010272	Thoc1	99	89.193	Mesocricetus_auratus
ENSODEG00000006623	THOC1	100	91.020	ENSMICG00000027200	THOC1	100	91.020	Microcebus_murinus
ENSODEG00000006623	THOC1	99	76.758	ENSMOCG00000014924	-	96	76.758	Microtus_ochrogaster
ENSODEG00000006623	THOC1	99	87.957	ENSMOCG00000014536	-	86	87.957	Microtus_ochrogaster
ENSODEG00000006623	THOC1	92	67.758	ENSMMOG00000011772	thoc1	100	67.758	Mola_mola
ENSODEG00000006623	THOC1	100	87.218	ENSMODG00000021482	THOC1	100	87.218	Monodelphis_domestica
ENSODEG00000006623	THOC1	98	67.127	ENSMALG00000021872	thoc1	99	67.127	Monopterus_albus
ENSODEG00000006623	THOC1	100	89.498	MGP_CAROLIEiJ_G0021989	Thoc1	100	89.498	Mus_caroli
ENSODEG00000006623	THOC1	100	89.650	ENSMUSG00000024287	Thoc1	100	89.650	Mus_musculus
ENSODEG00000006623	THOC1	100	89.650	MGP_PahariEiJ_G0018726	Thoc1	100	89.650	Mus_pahari
ENSODEG00000006623	THOC1	100	89.498	MGP_SPRETEiJ_G0022905	Thoc1	100	89.498	Mus_spretus
ENSODEG00000006623	THOC1	100	90.868	ENSMPUG00000005448	THOC1	100	90.868	Mustela_putorius_furo
ENSODEG00000006623	THOC1	89	77.740	ENSMLUG00000027965	-	99	77.572	Myotis_lucifugus
ENSODEG00000006623	THOC1	100	90.274	ENSMLUG00000004090	-	100	90.274	Myotis_lucifugus
ENSODEG00000006623	THOC1	58	75.315	ENSMLUG00000024912	-	100	75.315	Myotis_lucifugus
ENSODEG00000006623	THOC1	99	70.031	ENSNGAG00000008061	-	99	70.943	Nannospalax_galili
ENSODEG00000006623	THOC1	100	90.411	ENSNGAG00000001401	-	100	90.411	Nannospalax_galili
ENSODEG00000006623	THOC1	96	67.823	ENSNBRG00000005991	thoc1	97	67.823	Neolamprologus_brichardi
ENSODEG00000006623	THOC1	100	90.563	ENSNLEG00000006835	THOC1	100	90.563	Nomascus_leucogenys
ENSODEG00000006623	THOC1	97	75.900	ENSMEUG00000009756	THOC1	99	75.900	Notamacropus_eugenii
ENSODEG00000006623	THOC1	100	71.994	ENSOPRG00000001108	THOC1	100	71.994	Ochotona_princeps
ENSODEG00000006623	THOC1	99	67.278	ENSONIG00000009440	thoc1	99	66.717	Oreochromis_niloticus
ENSODEG00000006623	THOC1	100	91.476	ENSOCUG00000011601	THOC1	100	91.476	Oryctolagus_cuniculus
ENSODEG00000006623	THOC1	98	66.871	ENSORLG00000017629	thoc1	99	66.871	Oryzias_latipes
ENSODEG00000006623	THOC1	98	66.871	ENSORLG00020007567	thoc1	99	66.871	Oryzias_latipes_hni
ENSODEG00000006623	THOC1	98	67.025	ENSORLG00015007356	thoc1	99	67.025	Oryzias_latipes_hsok
ENSODEG00000006623	THOC1	98	65.231	ENSOMEG00000008200	thoc1	99	66.104	Oryzias_melastigma
ENSODEG00000006623	THOC1	100	87.671	ENSOGAG00000000470	THOC1	99	87.671	Otolemur_garnettii
ENSODEG00000006623	THOC1	99	89.297	ENSOARG00000009238	THOC1	99	89.297	Ovis_aries
ENSODEG00000006623	THOC1	100	90.563	ENSPPAG00000031812	THOC1	99	90.563	Pan_paniscus
ENSODEG00000006623	THOC1	100	90.259	ENSPPRG00000023794	THOC1	100	90.259	Panthera_pardus
ENSODEG00000006623	THOC1	100	90.259	ENSPTIG00000007469	THOC1	100	90.259	Panthera_tigris_altaica
ENSODEG00000006623	THOC1	100	89.759	ENSPTRG00000009816	THOC1	100	89.759	Pan_troglodytes
ENSODEG00000006623	THOC1	100	89.561	ENSPANG00000008665	THOC1	100	89.561	Papio_anubis
ENSODEG00000006623	THOC1	99	67.534	ENSPKIG00000005906	thoc1	99	68.300	Paramormyrops_kingsleyae
ENSODEG00000006623	THOC1	80	86.679	ENSPSIG00000007691	THOC1	98	86.679	Pelodiscus_sinensis
ENSODEG00000006623	THOC1	93	68.071	ENSPMGG00000008279	thoc1	95	68.071	Periophthalmus_magnuspinnatus
ENSODEG00000006623	THOC1	100	89.650	ENSPEMG00000021789	Thoc1	100	89.650	Peromyscus_maniculatus_bairdii
ENSODEG00000006623	THOC1	72	85.830	ENSPCIG00000026942	THOC1	98	85.830	Phascolarctos_cinereus
ENSODEG00000006623	THOC1	98	66.667	ENSPFOG00000011673	thoc1	99	66.667	Poecilia_formosa
ENSODEG00000006623	THOC1	98	66.564	ENSPLAG00000019648	thoc1	99	66.564	Poecilia_latipinna
ENSODEG00000006623	THOC1	98	66.667	ENSPMEG00000007083	thoc1	99	66.667	Poecilia_mexicana
ENSODEG00000006623	THOC1	98	66.564	ENSPREG00000006719	thoc1	99	66.564	Poecilia_reticulata
ENSODEG00000006623	THOC1	73	89.117	ENSPPYG00000009049	-	99	89.117	Pongo_abelii
ENSODEG00000006623	THOC1	100	80.974	ENSPCAG00000005320	THOC1	100	79.909	Procavia_capensis
ENSODEG00000006623	THOC1	100	90.563	ENSPCOG00000009234	THOC1	100	90.563	Propithecus_coquereli
ENSODEG00000006623	THOC1	100	89.602	ENSPVAG00000004007	THOC1	100	89.602	Pteropus_vampyrus
ENSODEG00000006623	THOC1	98	67.178	ENSPNYG00000019152	thoc1	99	67.178	Pundamilia_nyererei
ENSODEG00000006623	THOC1	98	68.769	ENSPNAG00000023390	thoc1	99	68.769	Pygocentrus_nattereri
ENSODEG00000006623	THOC1	90	85.156	ENSRNOG00000015332	Thoc1	100	85.156	Rattus_norvegicus
ENSODEG00000006623	THOC1	100	89.608	ENSRBIG00000033738	THOC1	99	90.609	Rhinopithecus_bieti
ENSODEG00000006623	THOC1	100	90.563	ENSRROG00000044988	THOC1	100	90.563	Rhinopithecus_roxellana
ENSODEG00000006623	THOC1	100	90.411	ENSSBOG00000016556	THOC1	99	90.411	Saimiri_boliviensis_boliviensis
ENSODEG00000006623	THOC1	100	87.994	ENSSHAG00000014829	THOC1	100	87.994	Sarcophilus_harrisii
ENSODEG00000006623	THOC1	98	69.172	ENSSFOG00015021527	thoc1	99	69.172	Scleropages_formosus
ENSODEG00000006623	THOC1	98	65.131	ENSSMAG00000018465	thoc1	99	65.131	Scophthalmus_maximus
ENSODEG00000006623	THOC1	98	67.742	ENSSDUG00000016810	thoc1	99	67.742	Seriola_dumerili
ENSODEG00000006623	THOC1	98	67.435	ENSSLDG00000015555	thoc1	99	67.435	Seriola_lalandi_dorsalis
ENSODEG00000006623	THOC1	88	94.714	ENSSARG00000006910	THOC1	83	94.714	Sorex_araneus
ENSODEG00000006623	THOC1	98	83.385	ENSSPUG00000007238	THOC1	99	83.359	Sphenodon_punctatus
ENSODEG00000006623	THOC1	98	64.679	ENSSPAG00000018847	thoc1	99	64.679	Stegastes_partitus
ENSODEG00000006623	THOC1	100	91.020	ENSSSCG00000025653	THOC1	94	91.020	Sus_scrofa
ENSODEG00000006623	THOC1	99	84.733	ENSTGUG00000010204	THOC1	99	84.733	Taeniopygia_guttata
ENSODEG00000006623	THOC1	98	66.564	ENSTRUG00000013518	thoc1	99	66.564	Takifugu_rubripes
ENSODEG00000006623	THOC1	98	67.331	ENSTNIG00000008473	thoc1	99	67.331	Tetraodon_nigroviridis
ENSODEG00000006623	THOC1	100	83.079	ENSTBEG00000016920	THOC1	100	83.079	Tupaia_belangeri
ENSODEG00000006623	THOC1	100	83.409	ENSTTRG00000016664	THOC1	100	83.409	Tursiops_truncatus
ENSODEG00000006623	THOC1	100	90.715	ENSUAMG00000002527	THOC1	100	90.715	Ursus_americanus
ENSODEG00000006623	THOC1	100	90.715	ENSUMAG00000019693	THOC1	100	90.715	Ursus_maritimus
ENSODEG00000006623	THOC1	76	93.000	ENSVPAG00000003726	-	77	93.000	Vicugna_pacos
ENSODEG00000006623	THOC1	100	90.715	ENSVVUG00000004384	THOC1	100	90.715	Vulpes_vulpes
ENSODEG00000006623	THOC1	99	73.485	ENSXETG00000003155	thoc1	98	73.485	Xenopus_tropicalis
ENSODEG00000006623	THOC1	92	64.812	ENSXCOG00000016085	thoc1	89	64.812	Xiphophorus_couchianus
ENSODEG00000006623	THOC1	98	66.871	ENSXMAG00000002353	thoc1	99	66.871	Xiphophorus_maculatus