EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006639 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1432 bases
Position: chrJH651528.1:25528744-25530175
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008879	RRM_1	PF00076.22	6e-06	1	1
ENSODEP00000008879	La	PF05383.17	5.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009011	-	498	-	ENSODEP00000008879	165 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006639's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006639	-	84	82.692	ENSODEG00000010185	-	99	78.981
ENSODEG00000006639	-	90	75.152	ENSODEG00000010041	-	99	75.152

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006639	-	100	72.527	ENSG00000138385	SSB	88	88.571	Homo_sapiens
ENSODEG00000006639	-	80	56.376	ENSACIG00000001738	ssb	85	52.991	Amphilophus_citrinellus
ENSODEG00000006639	-	99	73.333	ENSCJAG00000045073	SSB	85	77.391	Callithrix_jacchus
ENSODEG00000006639	-	99	73.333	ENSCCAG00000035147	SSB	86	78.261	Cebus_capucinus
ENSODEG00000006639	-	85	80.255	ENSCLAG00000004563	-	99	80.255	Chinchilla_lanigera
ENSODEG00000006639	-	55	59.406	ENSFHEG00000003003	-	87	59.406	Fundulus_heteroclitus
ENSODEG00000006639	-	70	88.710	ENSGGOG00000011507	-	84	88.710	Gorilla_gorilla
ENSODEG00000006639	-	84	81.757	ENSHGLG00000001810	-	71	81.757	Heterocephalus_glaber_female
ENSODEG00000006639	-	86	77.358	ENSHGLG00000011331	-	100	77.358	Heterocephalus_glaber_female
ENSODEG00000006639	-	90	76.506	ENSHGLG00000018387	-	98	76.506	Heterocephalus_glaber_female
ENSODEG00000006639	-	84	77.564	ENSHGLG00100007213	-	80	77.564	Heterocephalus_glaber_male
ENSODEG00000006639	-	98	74.586	ENSHGLG00100014205	-	100	74.586	Heterocephalus_glaber_male
ENSODEG00000006639	-	61	73.504	ENSHGLG00100003175	-	99	73.504	Heterocephalus_glaber_male
ENSODEG00000006639	-	61	72.881	ENSHGLG00100006391	-	89	72.881	Heterocephalus_glaber_male
ENSODEG00000006639	-	81	67.832	ENSHGLG00100008353	-	65	67.832	Heterocephalus_glaber_male
ENSODEG00000006639	-	64	75.410	ENSHGLG00100013137	-	75	75.410	Heterocephalus_glaber_male
ENSODEG00000006639	-	82	60.784	ENSLAFG00000026721	-	51	60.784	Loxodonta_africana
ENSODEG00000006639	-	100	72.527	ENSMFAG00000039066	SSB	85	78.261	Macaca_fascicularis
ENSODEG00000006639	-	100	72.527	ENSMMUG00000023051	SSB	85	78.261	Macaca_mulatta
ENSODEG00000006639	-	100	72.527	ENSMNEG00000028321	SSB	85	78.261	Macaca_nemestrina
ENSODEG00000006639	-	100	72.527	ENSMLEG00000035717	SSB	88	78.261	Mandrillus_leucophaeus
ENSODEG00000006639	-	99	62.222	ENSMGAG00000010328	SSB	76	68.590	Meleagris_gallopavo
ENSODEG00000006639	-	81	76.821	ENSMAUG00000019529	-	99	76.821	Mesocricetus_auratus
ENSODEG00000006639	-	81	76.159	ENSMOCG00000001823	-	99	76.159	Microtus_ochrogaster
ENSODEG00000006639	-	59	53.913	ENSMMOG00000002088	-	88	53.913	Mola_mola
ENSODEG00000006639	-	84	78.205	MGP_CAROLIEiJ_G0023629	-	99	75.316	Mus_caroli
ENSODEG00000006639	-	84	78.205	ENSMUSG00000068882	Ssb	99	75.316	Mus_musculus
ENSODEG00000006639	-	84	77.564	MGP_PahariEiJ_G0025081	-	99	74.684	Mus_pahari
ENSODEG00000006639	-	84	78.205	MGP_SPRETEiJ_G0024551	Ssb	99	75.316	Mus_spretus
ENSODEG00000006639	-	59	74.783	ENSNGAG00000012920	-	82	74.783	Nannospalax_galili
ENSODEG00000006639	-	100	72.527	ENSNLEG00000004958	SSB	86	78.261	Nomascus_leucogenys
ENSODEG00000006639	-	73	77.519	ENSMEUG00000001650	-	52	77.519	Notamacropus_eugenii
ENSODEG00000006639	-	100	72.527	ENSPPAG00000042673	SSB	86	78.261	Pan_paniscus
ENSODEG00000006639	-	99	59.538	ENSPPAG00000032427	-	100	77.236	Pan_paniscus
ENSODEG00000006639	-	100	72.527	ENSPTRG00000012620	SSB	86	78.261	Pan_troglodytes
ENSODEG00000006639	-	100	72.527	ENSPANG00000007440	SSB	85	78.261	Papio_anubis
ENSODEG00000006639	-	81	77.483	ENSPEMG00000021746	-	99	77.483	Peromyscus_maniculatus_bairdii
ENSODEG00000006639	-	68	66.667	ENSPCIG00000016333	-	92	66.667	Phascolarctos_cinereus
ENSODEG00000006639	-	84	79.487	ENSPCOG00000015741	-	92	74.138	Propithecus_coquereli
ENSODEG00000006639	-	78	75.342	ENSRBIG00000041972	SSB	88	78.261	Rhinopithecus_bieti
ENSODEG00000006639	-	73	88.333	ENSRBIG00000041232	-	81	86.179	Rhinopithecus_bieti
ENSODEG00000006639	-	100	72.527	ENSRROG00000040346	SSB	85	78.261	Rhinopithecus_roxellana
ENSODEG00000006639	-	78	81.159	ENSRROG00000031684	-	86	81.159	Rhinopithecus_roxellana
ENSODEG00000006639	-	99	73.333	ENSSBOG00000027204	SSB	86	78.261	Saimiri_boliviensis_boliviensis
ENSODEG00000006639	-	77	57.246	ENSXCOG00000019109	ssb	73	58.163	Xiphophorus_couchianus