EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006648 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1689 bases
Position: chrJH651538.1:16127813-16129501
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008890	zf-RanBP	PF00641.18	1.6e-06	1	1
ENSODEP00000008889	zf-RanBP	PF00641.18	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009025	-	627	-	ENSODEP00000008893	208 (aa)	-	-
ENSODET00000009024	-	630	-	ENSODEP00000008892	209 (aa)	-	-
ENSODET00000009027	-	492	-	ENSODEP00000008895	163 (aa)	-	-
ENSODET00000009026	-	531	-	ENSODEP00000008894	176 (aa)	-	-
ENSODET00000009021	-	1338	-	ENSODEP00000008889	445 (aa)	-	-
ENSODET00000009023	-	729	-	ENSODEP00000008891	242 (aa)	-	-
ENSODET00000009022	-	1263	-	ENSODEP00000008890	420 (aa)	-	-
ENSODET00000009029	-	252	-	ENSODEP00000008897	83 (aa)	-	-
ENSODET00000009028	-	708	-	ENSODEP00000008896	235 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006648's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006648's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006648	-	99	78.838	ENSODEG00000004028	-	99	78.838
ENSODEG00000006648	-	99	70.769	ENSODEG00000000416	-	97	84.672

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006648	-	56	51.765	ENSG00000198625	MDM4	98	45.614	Homo_sapiens
ENSODEG00000006648	-	99	72.802	ENSG00000135679	MDM2	99	86.275	Homo_sapiens
ENSODEG00000006648	-	98	30.845	ENSAMEG00000001126	MDM4	96	30.816	Ailuropoda_melanoleuca
ENSODEG00000006648	-	99	73.608	ENSAMEG00000008526	MDM2	98	73.608	Ailuropoda_melanoleuca
ENSODEG00000006648	-	99	55.738	ENSAPLG00000011164	MDM2	98	55.943	Anas_platyrhynchos
ENSODEG00000006648	-	92	49.342	ENSACAG00000004204	MDM2	85	49.342	Anolis_carolinensis
ENSODEG00000006648	-	94	63.684	ENSANAG00000027171	-	99	86.275	Aotus_nancymaae
ENSODEG00000006648	-	99	72.245	ENSBTAG00000010422	MDM2	99	72.245	Bos_taurus
ENSODEG00000006648	-	56	40.833	ENSCJAG00000040017	-	99	42.164	Callithrix_jacchus
ENSODEG00000006648	-	99	71.370	ENSCJAG00000007464	-	86	71.370	Callithrix_jacchus
ENSODEG00000006648	-	99	71.575	ENSCJAG00000042596	-	98	71.575	Callithrix_jacchus
ENSODEG00000006648	-	96	73.036	ENSCAFG00000000418	MDM2	93	73.036	Canis_familiaris
ENSODEG00000006648	-	94	30.123	ENSCAFG00000009669	MDM4	96	30.533	Canis_familiaris
ENSODEG00000006648	-	99	73.814	ENSCAFG00020017002	MDM2	99	73.814	Canis_lupus_dingo
ENSODEG00000006648	-	98	30.339	ENSCHIG00000010343	-	99	30.315	Capra_hircus
ENSODEG00000006648	-	99	72.188	ENSCHIG00000019939	-	99	72.188	Capra_hircus
ENSODEG00000006648	-	92	59.122	ENSTSYG00000031248	-	97	59.865	Carlito_syrichta
ENSODEG00000006648	-	99	76.531	ENSCPOG00000004323	MDM2	99	76.531	Cavia_porcellus
ENSODEG00000006648	-	93	30.000	ENSCPOG00000008227	MDM4	96	30.417	Cavia_porcellus
ENSODEG00000006648	-	99	71.894	ENSCCAG00000006745	-	99	86.275	Cebus_capucinus
ENSODEG00000006648	-	99	73.006	ENSCATG00000045264	-	99	86.275	Cercocebus_atys
ENSODEG00000006648	-	99	75.813	ENSCLAG00000009877	MDM2	98	75.813	Chinchilla_lanigera
ENSODEG00000006648	-	98	30.444	ENSCLAG00000011995	MDM4	99	30.444	Chinchilla_lanigera
ENSODEG00000006648	-	99	72.802	ENSCSAG00000004244	MDM2	99	72.802	Chlorocebus_sabaeus
ENSODEG00000006648	-	99	55.441	ENSCPBG00000013316	MDM2	99	56.148	Chrysemys_picta_bellii
ENSODEG00000006648	-	99	72.393	ENSCANG00000034475	MDM2	99	84.314	Colobus_angolensis_palliatus
ENSODEG00000006648	-	99	70.417	ENSCGRG00001022261	Mdm2	99	70.417	Cricetulus_griseus_chok1gshd
ENSODEG00000006648	-	99	70.625	ENSCGRG00000017891	Mdm2	99	70.625	Cricetulus_griseus_crigri
ENSODEG00000006648	-	99	71.400	ENSDNOG00000046929	-	96	71.400	Dasypus_novemcinctus
ENSODEG00000006648	-	94	31.417	ENSDNOG00000000842	MDM4	92	30.704	Dasypus_novemcinctus
ENSODEG00000006648	-	93	31.172	ENSDORG00000006873	Mdm4	93	30.043	Dipodomys_ordii
ENSODEG00000006648	-	99	59.871	ENSDORG00000007222	Mdm2	99	88.235	Dipodomys_ordii
ENSODEG00000006648	-	89	73.529	ENSETEG00000011183	MDM2	89	73.529	Echinops_telfairi
ENSODEG00000006648	-	99	64.682	ENSEASG00005008055	-	99	65.503	Equus_asinus_asinus
ENSODEG00000006648	-	94	30.801	ENSEASG00005011431	MDM4	96	30.801	Equus_asinus_asinus
ENSODEG00000006648	-	99	64.417	ENSECAG00000013604	MDM2	99	65.235	Equus_caballus
ENSODEG00000006648	-	94	30.801	ENSECAG00000004843	MDM4	96	30.801	Equus_caballus
ENSODEG00000006648	-	99	64.330	ENSEEUG00000013849	MDM2	99	64.330	Erinaceus_europaeus
ENSODEG00000006648	-	59	53.448	ENSEEUG00000013912	MDM4	63	47.917	Erinaceus_europaeus
ENSODEG00000006648	-	60	48.571	ENSFCAG00000014851	MDM4	99	30.099	Felis_catus
ENSODEG00000006648	-	99	73.211	ENSFCAG00000024456	MDM2	99	88.235	Felis_catus
ENSODEG00000006648	-	99	74.593	ENSFDAG00000007913	-	98	74.593	Fukomys_damarensis
ENSODEG00000006648	-	99	56.148	ENSGALG00000009942	MDM2	99	56.148	Gallus_gallus
ENSODEG00000006648	-	84	52.857	ENSGAGG00000017565	-	80	53.444	Gopherus_agassizii
ENSODEG00000006648	-	99	72.597	ENSGGOG00000012907	MDM2	99	86.275	Gorilla_gorilla
ENSODEG00000006648	-	99	70.408	ENSHGLG00000016066	-	99	70.408	Heterocephalus_glaber_female
ENSODEG00000006648	-	99	74.187	ENSHGLG00000000856	-	99	74.187	Heterocephalus_glaber_female
ENSODEG00000006648	-	98	30.080	ENSHGLG00000007642	MDM4	99	30.080	Heterocephalus_glaber_female
ENSODEG00000006648	-	99	73.469	ENSHGLG00000020526	-	97	73.469	Heterocephalus_glaber_female
ENSODEG00000006648	-	81	71.602	ENSHGLG00100000441	-	99	71.663	Heterocephalus_glaber_male
ENSODEG00000006648	-	93	30.635	ENSHCOG00000008924	mdm4	92	30.180	Hippocampus_comes
ENSODEG00000006648	-	99	72.951	ENSSTOG00000014702	-	99	72.951	Ictidomys_tridecemlineatus
ENSODEG00000006648	-	99	50.408	ENSLACG00000010207	MDM2	99	51.837	Latimeria_chalumnae
ENSODEG00000006648	-	99	68.432	ENSLAFG00000005885	MDM2	99	68.432	Loxodonta_africana
ENSODEG00000006648	-	98	30.584	ENSLAFG00000002169	MDM4	99	30.584	Loxodonta_africana
ENSODEG00000006648	-	99	73.006	ENSMFAG00000042359	MDM2	99	86.275	Macaca_fascicularis
ENSODEG00000006648	-	99	73.006	ENSMMUG00000014193	MDM2	99	86.275	Macaca_mulatta
ENSODEG00000006648	-	99	73.006	ENSMNEG00000041135	MDM2	99	86.275	Macaca_nemestrina
ENSODEG00000006648	-	99	73.006	ENSMLEG00000042099	MDM2	99	86.275	Mandrillus_leucophaeus
ENSODEG00000006648	-	92	56.193	ENSMGAG00000010513	MDM2	96	56.250	Meleagris_gallopavo
ENSODEG00000006648	-	99	68.432	ENSMICG00000029037	-	99	84.314	Microcebus_murinus
ENSODEG00000006648	-	99	57.749	ENSMICG00000046928	-	98	57.749	Microcebus_murinus
ENSODEG00000006648	-	99	72.165	ENSMOCG00000008043	Mdm2	99	72.577	Microtus_ochrogaster
ENSODEG00000006648	-	93	31.667	ENSMODG00000001605	MDM4	95	31.667	Monodelphis_domestica
ENSODEG00000006648	-	99	60.451	ENSMODG00000007219	-	99	60.451	Monodelphis_domestica
ENSODEG00000006648	-	93	30.000	ENSMALG00000020663	mdm4	92	30.197	Monopterus_albus
ENSODEG00000006648	-	99	65.392	MGP_CAROLIEiJ_G0015836	Mdm2	99	65.795	Mus_caroli
ENSODEG00000006648	-	99	67.886	ENSMUSG00000020184	Mdm2	99	67.886	Mus_musculus
ENSODEG00000006648	-	99	67.068	MGP_PahariEiJ_G0031251	Mdm2	99	67.269	Mus_pahari
ENSODEG00000006648	-	94	30.470	MGP_PahariEiJ_G0027829	Mdm4	97	30.707	Mus_pahari
ENSODEG00000006648	-	99	68.163	MGP_SPRETEiJ_G0016659	Mdm2	99	68.163	Mus_spretus
ENSODEG00000006648	-	99	72.577	ENSMPUG00000017505	MDM2	99	72.577	Mustela_putorius_furo
ENSODEG00000006648	-	98	30.677	ENSMPUG00000011721	MDM4	99	30.677	Mustela_putorius_furo
ENSODEG00000006648	-	93	30.271	ENSMLUG00000007129	MDM4	95	30.271	Myotis_lucifugus
ENSODEG00000006648	-	99	69.919	ENSMLUG00000009997	MDM2	98	69.919	Myotis_lucifugus
ENSODEG00000006648	-	94	31.070	ENSNGAG00000012344	Mdm4	96	31.070	Nannospalax_galili
ENSODEG00000006648	-	99	72.371	ENSNGAG00000012154	Mdm2	99	72.371	Nannospalax_galili
ENSODEG00000006648	-	99	72.393	ENSNLEG00000003757	MDM2	99	86.275	Nomascus_leucogenys
ENSODEG00000006648	-	77	50.000	ENSMEUG00000012624	-	74	50.000	Notamacropus_eugenii
ENSODEG00000006648	-	99	67.611	ENSOPRG00000009677	MDM2	99	67.611	Ochotona_princeps
ENSODEG00000006648	-	93	31.277	ENSOANG00000013464	MDM4	97	30.349	Ornithorhynchus_anatinus
ENSODEG00000006648	-	92	58.295	ENSOANG00000005942	MDM2	99	58.581	Ornithorhynchus_anatinus
ENSODEG00000006648	-	99	68.024	ENSOCUG00000011354	-	99	68.024	Oryctolagus_cuniculus
ENSODEG00000006648	-	99	73.320	ENSOCUG00000010899	-	64	73.320	Oryctolagus_cuniculus
ENSODEG00000006648	-	99	67.546	ENSOGAG00000034779	MDM2	99	67.546	Otolemur_garnettii
ENSODEG00000006648	-	99	65.914	ENSOGAG00000011845	-	99	65.914	Otolemur_garnettii
ENSODEG00000006648	-	99	71.690	ENSOARG00000000570	-	98	71.690	Ovis_aries
ENSODEG00000006648	-	99	71.779	ENSOARG00000013821	-	99	71.779	Ovis_aries
ENSODEG00000006648	-	96	30.200	ENSOARG00000002783	-	99	30.461	Ovis_aries
ENSODEG00000006648	-	99	72.802	ENSPPAG00000032775	MDM2	99	86.275	Pan_paniscus
ENSODEG00000006648	-	60	48.571	ENSPPRG00000025076	MDM4	99	30.099	Panthera_pardus
ENSODEG00000006648	-	99	73.620	ENSPPRG00000000082	MDM2	99	88.235	Panthera_pardus
ENSODEG00000006648	-	99	73.415	ENSPTIG00000016929	MDM2	99	88.235	Panthera_tigris_altaica
ENSODEG00000006648	-	99	72.802	ENSPTRG00000005203	MDM2	99	86.275	Pan_troglodytes
ENSODEG00000006648	-	99	73.006	ENSPANG00000005563	MDM2	99	86.275	Papio_anubis
ENSODEG00000006648	-	92	55.251	ENSPSIG00000016379	-	99	56.036	Pelodiscus_sinensis
ENSODEG00000006648	-	99	61.111	ENSPCIG00000005357	-	99	61.991	Phascolarctos_cinereus
ENSODEG00000006648	-	93	30.417	ENSPCIG00000017446	MDM4	95	30.417	Phascolarctos_cinereus
ENSODEG00000006648	-	99	72.188	ENSPPYG00000004754	MDM2	98	72.188	Pongo_abelii
ENSODEG00000006648	-	99	67.006	ENSPCAG00000008949	MDM2	98	67.006	Procavia_capensis
ENSODEG00000006648	-	98	30.364	ENSPCOG00000024397	MDM4	99	30.769	Propithecus_coquereli
ENSODEG00000006648	-	92	70.575	ENSPCOG00000018521	-	99	70.575	Propithecus_coquereli
ENSODEG00000006648	-	99	68.367	ENSPVAG00000006202	MDM2	99	68.228	Pteropus_vampyrus
ENSODEG00000006648	-	75	53.448	ENSPVAG00000005663	MDM4	73	50.704	Pteropus_vampyrus
ENSODEG00000006648	-	96	30.629	ENSRNOG00000009696	Mdm4	97	30.629	Rattus_norvegicus
ENSODEG00000006648	-	99	68.519	ENSRNOG00000006304	Mdm2	99	68.519	Rattus_norvegicus
ENSODEG00000006648	-	99	73.006	ENSRBIG00000028561	MDM2	99	86.275	Rhinopithecus_bieti
ENSODEG00000006648	-	99	73.006	ENSRROG00000045589	-	99	86.275	Rhinopithecus_roxellana
ENSODEG00000006648	-	99	71.779	ENSSBOG00000014544	-	99	86.275	Saimiri_boliviensis_boliviensis
ENSODEG00000006648	-	82	54.126	ENSSHAG00000000124	-	100	54.126	Sarcophilus_harrisii
ENSODEG00000006648	-	94	30.417	ENSSHAG00000007767	MDM4	95	30.417	Sarcophilus_harrisii
ENSODEG00000006648	-	99	59.796	ENSSHAG00000010284	-	99	59.796	Sarcophilus_harrisii
ENSODEG00000006648	-	96	30.952	ENSSFOG00015001112	mdm4	92	30.998	Scleropages_formosus
ENSODEG00000006648	-	99	67.689	ENSSARG00000005801	MDM2	99	67.689	Sorex_araneus
ENSODEG00000006648	-	94	30.462	ENSSARG00000004179	MDM4	95	30.462	Sorex_araneus
ENSODEG00000006648	-	99	53.550	ENSSPUG00000000964	MDM2	99	53.550	Sphenodon_punctatus
ENSODEG00000006648	-	99	72.393	ENSSSCG00000000488	MDM2	99	72.393	Sus_scrofa
ENSODEG00000006648	-	93	56.293	ENSTGUG00000006836	MDM2	97	56.570	Taeniopygia_guttata
ENSODEG00000006648	-	59	30.686	ENSTGUG00000017483	MDM4	87	30.686	Taeniopygia_guttata
ENSODEG00000006648	-	77	57.067	ENSTBEG00000013758	MDM2	74	57.067	Tupaia_belangeri
ENSODEG00000006648	-	78	89.583	ENSTTRG00000015715	MDM2	77	89.583	Tursiops_truncatus
ENSODEG00000006648	-	94	30.561	ENSTTRG00000012174	MDM4	96	30.561	Tursiops_truncatus
ENSODEG00000006648	-	94	30.816	ENSUAMG00000007328	MDM4	96	30.816	Ursus_americanus
ENSODEG00000006648	-	87	90.385	ENSUAMG00000018322	-	99	90.385	Ursus_americanus
ENSODEG00000006648	-	99	73.814	ENSUMAG00000020757	MDM2	99	73.814	Ursus_maritimus
ENSODEG00000006648	-	99	68.098	ENSVPAG00000007456	MDM2	98	68.098	Vicugna_pacos
ENSODEG00000006648	-	94	30.247	ENSVVUG00000014855	MDM4	96	30.658	Vulpes_vulpes
ENSODEG00000006648	-	99	47.495	ENSXETG00000001434	mdm2	99	46.169	Xenopus_tropicalis