EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006700 (Gene tree)
Gene ID: 101566291
Gene Symbol: RBPMS
Alias: -
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 175219 bases
Position: chrJH651568.1:4185057-4360275
Accession: 101566291
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000008973	RRM_1	PF00076.22	1.1e-11	1	1
ENSODEP00000008972	RRM_1	PF00076.22	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009104	RBPMS-201	828	XM_004633290	ENSODEP00000008972	219 (aa)	XP_004633347	UPI000002B229
ENSODET00000009105	RBPMS-202	781	XM_004633291	ENSODEP00000008973	196 (aa)	XP_004633348	UPI0000133385

Gene Model

Click here to download ENSODEG00000006700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006700's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006700	RBPMS	89	73.184	ENSODEG00000016172	RBPMS2	95	74.302

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006700	RBPMS	100	100.000	ENSG00000157110	RBPMS	100	100.000	Homo_sapiens
ENSODEG00000006700	RBPMS	99	84.536	ENSAPOG00000022304	RBPMS	99	84.536	Acanthochromis_polyacanthus
ENSODEG00000006700	RBPMS	93	98.039	ENSAMEG00000001522	RBPMS	93	98.039	Ailuropoda_melanoleuca
ENSODEG00000006700	RBPMS	66	78.676	ENSACIG00000011395	RBPMS	75	77.857	Amphilophus_citrinellus
ENSODEG00000006700	RBPMS	99	84.536	ENSAOCG00000007731	RBPMS	99	84.536	Amphiprion_ocellaris
ENSODEG00000006700	RBPMS	99	84.536	ENSAPEG00000023543	RBPMS	99	84.536	Amphiprion_percula
ENSODEG00000006700	RBPMS	99	84.536	ENSATEG00000018184	RBPMS	99	84.536	Anabas_testudineus
ENSODEG00000006700	RBPMS	99	93.846	ENSACAG00000003012	RBPMS	99	93.846	Anolis_carolinensis
ENSODEG00000006700	RBPMS	100	100.000	ENSANAG00000028150	RBPMS	100	100.000	Aotus_nancymaae
ENSODEG00000006700	RBPMS	99	85.052	ENSACLG00000002926	RBPMS	99	85.052	Astatotilapia_calliptera
ENSODEG00000006700	RBPMS	100	83.163	ENSAMXG00000033491	rbpms	100	83.163	Astyanax_mexicanus
ENSODEG00000006700	RBPMS	100	98.630	ENSBTAG00000033727	RBPMS	100	98.630	Bos_taurus
ENSODEG00000006700	RBPMS	100	100.000	ENSCJAG00000012366	RBPMS	100	100.000	Callithrix_jacchus
ENSODEG00000006700	RBPMS	100	100.000	ENSCAFG00000006503	RBPMS	100	100.000	Canis_familiaris
ENSODEG00000006700	RBPMS	100	100.000	ENSCAFG00020001031	RBPMS	100	100.000	Canis_lupus_dingo
ENSODEG00000006700	RBPMS	100	92.893	ENSCHIG00000027156	RBPMS	100	92.893	Capra_hircus
ENSODEG00000006700	RBPMS	56	100.000	ENSTSYG00000013982	RBPMS	83	100.000	Carlito_syrichta
ENSODEG00000006700	RBPMS	100	99.087	ENSCPOG00000038597	RBPMS	100	99.087	Cavia_porcellus
ENSODEG00000006700	RBPMS	100	100.000	ENSCCAG00000033226	RBPMS	100	100.000	Cebus_capucinus
ENSODEG00000006700	RBPMS	100	100.000	ENSCATG00000036486	RBPMS	100	100.000	Cercocebus_atys
ENSODEG00000006700	RBPMS	90	100.000	ENSCLAG00000001518	RBPMS	100	100.000	Chinchilla_lanigera
ENSODEG00000006700	RBPMS	100	100.000	ENSCSAG00000015838	RBPMS	100	100.000	Chlorocebus_sabaeus
ENSODEG00000006700	RBPMS	90	99.492	ENSCHOG00000008745	RBPMS	100	99.492	Choloepus_hoffmanni
ENSODEG00000006700	RBPMS	99	92.268	ENSCPBG00000013437	RBPMS	99	92.268	Chrysemys_picta_bellii
ENSODEG00000006700	RBPMS	90	100.000	ENSCANG00000034997	RBPMS	100	100.000	Colobus_angolensis_palliatus
ENSODEG00000006700	RBPMS	100	99.091	ENSCGRG00001002814	Rbpms	100	99.091	Cricetulus_griseus_chok1gshd
ENSODEG00000006700	RBPMS	90	99.495	ENSCGRG00000006095	Rbpms	100	99.495	Cricetulus_griseus_crigri
ENSODEG00000006700	RBPMS	99	84.021	ENSCSEG00000002777	rbpms	99	85.714	Cynoglossus_semilaevis
ENSODEG00000006700	RBPMS	99	84.536	ENSCVAG00000013975	RBPMS	99	84.536	Cyprinodon_variegatus
ENSODEG00000006700	RBPMS	87	67.647	ENSDARG00000099396	rbpms	100	67.647	Danio_rerio
ENSODEG00000006700	RBPMS	100	96.804	ENSDNOG00000008126	RBPMS	100	96.804	Dasypus_novemcinctus
ENSODEG00000006700	RBPMS	100	99.087	ENSETEG00000017582	RBPMS	100	99.087	Echinops_telfairi
ENSODEG00000006700	RBPMS	90	100.000	ENSEASG00005016962	RBPMS	99	100.000	Equus_asinus_asinus
ENSODEG00000006700	RBPMS	100	99.543	ENSECAG00000020735	RBPMS	100	99.543	Equus_caballus
ENSODEG00000006700	RBPMS	99	81.443	ENSELUG00000009787	rbpms	99	81.443	Esox_lucius
ENSODEG00000006700	RBPMS	100	99.543	ENSFCAG00000025639	-	100	99.543	Felis_catus
ENSODEG00000006700	RBPMS	88	54.651	ENSFCAG00000022292	-	93	51.795	Felis_catus
ENSODEG00000006700	RBPMS	90	99.492	ENSFDAG00000012078	RBPMS	100	100.000	Fukomys_damarensis
ENSODEG00000006700	RBPMS	99	84.536	ENSFHEG00000000618	rbpms	99	84.536	Fundulus_heteroclitus
ENSODEG00000006700	RBPMS	77	56.954	ENSGMOG00000009646	-	100	56.954	Gadus_morhua
ENSODEG00000006700	RBPMS	99	84.536	ENSGAFG00000016566	RBPMS	99	84.536	Gambusia_affinis
ENSODEG00000006700	RBPMS	100	76.020	ENSGACG00000019471	rbpms	100	76.020	Gasterosteus_aculeatus
ENSODEG00000006700	RBPMS	64	88.095	ENSGAGG00000023634	RBPMS	56	85.821	Gopherus_agassizii
ENSODEG00000006700	RBPMS	99	85.052	ENSHBUG00000005888	RBPMS	99	85.052	Haplochromis_burtoni
ENSODEG00000006700	RBPMS	100	100.000	ENSHGLG00000002303	RBPMS	100	100.000	Heterocephalus_glaber_female
ENSODEG00000006700	RBPMS	90	100.000	ENSHGLG00100008787	RBPMS	100	100.000	Heterocephalus_glaber_male
ENSODEG00000006700	RBPMS	97	85.864	ENSHCOG00000005774	rbpms	99	85.864	Hippocampus_comes
ENSODEG00000006700	RBPMS	97	80.105	ENSIPUG00000012459	RBPMS	99	80.105	Ictalurus_punctatus
ENSODEG00000006700	RBPMS	100	99.543	ENSSTOG00000026546	RBPMS	100	99.543	Ictidomys_tridecemlineatus
ENSODEG00000006700	RBPMS	100	99.543	ENSJJAG00000014024	Rbpms	100	99.543	Jaculus_jaculus
ENSODEG00000006700	RBPMS	89	68.750	ENSKMAG00000006377	RBPMS	88	71.186	Kryptolebias_marmoratus
ENSODEG00000006700	RBPMS	100	84.694	ENSLBEG00000027989	RBPMS	97	87.931	Labrus_bergylta
ENSODEG00000006700	RBPMS	91	86.592	ENSLOCG00000013199	RBPMS	98	86.592	Lepisosteus_oculatus
ENSODEG00000006700	RBPMS	100	99.543	ENSLAFG00000000209	RBPMS	100	99.543	Loxodonta_africana
ENSODEG00000006700	RBPMS	100	100.000	ENSMFAG00000036911	RBPMS	100	100.000	Macaca_fascicularis
ENSODEG00000006700	RBPMS	100	100.000	ENSMMUG00000000458	RBPMS	100	100.000	Macaca_mulatta
ENSODEG00000006700	RBPMS	100	100.000	ENSMNEG00000043805	RBPMS	100	100.000	Macaca_nemestrina
ENSODEG00000006700	RBPMS	90	100.000	ENSMLEG00000015635	RBPMS	100	100.000	Mandrillus_leucophaeus
ENSODEG00000006700	RBPMS	92	68.333	ENSMAMG00000004604	RBPMS	92	68.333	Mastacembelus_armatus
ENSODEG00000006700	RBPMS	99	85.052	ENSMZEG00005000698	RBPMS	97	87.429	Maylandia_zebra
ENSODEG00000006700	RBPMS	89	96.571	ENSMGAG00000005088	RBPMS	90	96.571	Meleagris_gallopavo
ENSODEG00000006700	RBPMS	100	99.091	ENSMAUG00000018892	Rbpms	100	99.091	Mesocricetus_auratus
ENSODEG00000006700	RBPMS	100	98.469	ENSMICG00000001295	RBPMS	100	98.469	Microcebus_murinus
ENSODEG00000006700	RBPMS	100	99.091	ENSMOCG00000014009	Rbpms	100	99.091	Microtus_ochrogaster
ENSODEG00000006700	RBPMS	82	86.250	ENSMMOG00000012036	RBPMS	72	82.558	Mola_mola
ENSODEG00000006700	RBPMS	96	94.180	ENSMODG00000019006	RBPMS	92	92.308	Monodelphis_domestica
ENSODEG00000006700	RBPMS	99	83.505	ENSMALG00000003261	RBPMS	99	83.505	Monopterus_albus
ENSODEG00000006700	RBPMS	100	99.091	MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	Mus_caroli
ENSODEG00000006700	RBPMS	100	99.091	ENSMUSG00000031586	Rbpms	100	99.091	Mus_musculus
ENSODEG00000006700	RBPMS	100	98.636	MGP_PahariEiJ_G0021439	Rbpms	100	98.636	Mus_pahari
ENSODEG00000006700	RBPMS	100	99.091	MGP_SPRETEiJ_G0032087	Rbpms	100	99.091	Mus_spretus
ENSODEG00000006700	RBPMS	93	98.039	ENSMPUG00000011314	RBPMS	93	98.039	Mustela_putorius_furo
ENSODEG00000006700	RBPMS	100	98.980	ENSMLUG00000009391	RBPMS	100	98.980	Myotis_lucifugus
ENSODEG00000006700	RBPMS	100	100.000	ENSNGAG00000011141	Rbpms	100	100.000	Nannospalax_galili
ENSODEG00000006700	RBPMS	89	87.429	ENSNBRG00000003313	RBPMS	97	87.429	Neolamprologus_brichardi
ENSODEG00000006700	RBPMS	100	99.543	ENSNLEG00000036183	-	100	99.543	Nomascus_leucogenys
ENSODEG00000006700	RBPMS	100	79.452	ENSOPRG00000013151	RBPMS	100	79.452	Ochotona_princeps
ENSODEG00000006700	RBPMS	89	87.429	ENSONIG00000007546	RBPMS	100	87.429	Oreochromis_niloticus
ENSODEG00000006700	RBPMS	100	99.543	ENSOCUG00000008572	RBPMS	100	99.543	Oryctolagus_cuniculus
ENSODEG00000006700	RBPMS	100	83.673	ENSORLG00000004135	-	100	83.673	Oryzias_latipes
ENSODEG00000006700	RBPMS	100	84.184	ENSORLG00020016179	RBPMS	100	84.184	Oryzias_latipes_hni
ENSODEG00000006700	RBPMS	100	84.184	ENSORLG00015013770	RBPMS	100	84.184	Oryzias_latipes_hsok
ENSODEG00000006700	RBPMS	99	84.021	ENSOMEG00000005044	RBPMS	99	84.021	Oryzias_melastigma
ENSODEG00000006700	RBPMS	92	97.790	ENSOGAG00000030298	RBPMS	81	97.790	Otolemur_garnettii
ENSODEG00000006700	RBPMS	64	92.857	ENSOARG00000010366	RBPMS	94	88.722	Ovis_aries
ENSODEG00000006700	RBPMS	90	100.000	ENSPPAG00000033108	RBPMS	100	100.000	Pan_paniscus
ENSODEG00000006700	RBPMS	100	99.543	ENSPPRG00000004836	RBPMS	100	99.543	Panthera_pardus
ENSODEG00000006700	RBPMS	90	100.000	ENSPTIG00000015964	RBPMS	90	100.000	Panthera_tigris_altaica
ENSODEG00000006700	RBPMS	100	100.000	ENSPTRG00000020135	RBPMS	100	100.000	Pan_troglodytes
ENSODEG00000006700	RBPMS	100	100.000	ENSPANG00000008143	RBPMS	100	100.000	Papio_anubis
ENSODEG00000006700	RBPMS	99	81.443	ENSPKIG00000000535	-	99	81.443	Paramormyrops_kingsleyae
ENSODEG00000006700	RBPMS	96	80.423	ENSPKIG00000004836	rbpms	99	80.423	Paramormyrops_kingsleyae
ENSODEG00000006700	RBPMS	89	95.402	ENSPSIG00000006136	RBPMS	99	95.402	Pelodiscus_sinensis
ENSODEG00000006700	RBPMS	81	87.421	ENSPMGG00000018012	RBPMS	91	75.248	Periophthalmus_magnuspinnatus
ENSODEG00000006700	RBPMS	100	97.980	ENSPEMG00000021130	Rbpms	100	97.980	Peromyscus_maniculatus_bairdii
ENSODEG00000006700	RBPMS	90	96.591	ENSPCIG00000019298	-	81	79.899	Phascolarctos_cinereus
ENSODEG00000006700	RBPMS	99	84.536	ENSPFOG00000017158	RBPMS	99	84.536	Poecilia_formosa
ENSODEG00000006700	RBPMS	99	84.536	ENSPLAG00000010767	RBPMS	99	84.536	Poecilia_latipinna
ENSODEG00000006700	RBPMS	99	84.536	ENSPMEG00000009788	RBPMS	99	84.536	Poecilia_mexicana
ENSODEG00000006700	RBPMS	99	84.536	ENSPREG00000016959	RBPMS	99	84.536	Poecilia_reticulata
ENSODEG00000006700	RBPMS	100	100.000	ENSPPYG00000018487	RBPMS	100	100.000	Pongo_abelii
ENSODEG00000006700	RBPMS	56	98.182	ENSPCAG00000013493	-	100	98.182	Procavia_capensis
ENSODEG00000006700	RBPMS	100	87.215	ENSPCOG00000015948	RBPMS	100	87.215	Propithecus_coquereli
ENSODEG00000006700	RBPMS	99	98.165	ENSPVAG00000001661	RBPMS	99	98.165	Pteropus_vampyrus
ENSODEG00000006700	RBPMS	99	85.052	ENSPNYG00000001172	RBPMS	97	87.429	Pundamilia_nyererei
ENSODEG00000006700	RBPMS	100	83.673	ENSPNAG00000029160	RBPMS	100	83.673	Pygocentrus_nattereri
ENSODEG00000006700	RBPMS	100	99.091	ENSRNOG00000013328	Rbpms	100	99.091	Rattus_norvegicus
ENSODEG00000006700	RBPMS	98	93.023	ENSRBIG00000038218	RBPMS	100	100.000	Rhinopithecus_bieti
ENSODEG00000006700	RBPMS	100	100.000	ENSRROG00000042518	RBPMS	100	100.000	Rhinopithecus_roxellana
ENSODEG00000006700	RBPMS	100	99.543	ENSSBOG00000026670	RBPMS	100	99.543	Saimiri_boliviensis_boliviensis
ENSODEG00000006700	RBPMS	99	90.722	ENSSHAG00000010114	RBPMS	99	90.722	Sarcophilus_harrisii
ENSODEG00000006700	RBPMS	89	82.759	ENSSFOG00015017481	-	99	80.423	Scleropages_formosus
ENSODEG00000006700	RBPMS	99	82.474	ENSSFOG00015000417	rbpms	99	82.474	Scleropages_formosus
ENSODEG00000006700	RBPMS	99	84.536	ENSSMAG00000010871	rbpms	99	84.536	Scophthalmus_maximus
ENSODEG00000006700	RBPMS	99	84.536	ENSSDUG00000010894	RBPMS	99	84.536	Seriola_dumerili
ENSODEG00000006700	RBPMS	99	84.536	ENSSLDG00000012916	RBPMS	99	84.536	Seriola_lalandi_dorsalis
ENSODEG00000006700	RBPMS	100	95.434	ENSSARG00000000274	RBPMS	100	95.434	Sorex_araneus
ENSODEG00000006700	RBPMS	98	91.237	ENSSPUG00000017525	RBPMS	74	91.237	Sphenodon_punctatus
ENSODEG00000006700	RBPMS	100	63.776	ENSSPAG00000004777	rbpms	82	83.704	Stegastes_partitus
ENSODEG00000006700	RBPMS	100	99.543	ENSSSCG00000015846	RBPMS	100	99.543	Sus_scrofa
ENSODEG00000006700	RBPMS	97	93.158	ENSTGUG00000001776	RBPMS	100	93.158	Taeniopygia_guttata
ENSODEG00000006700	RBPMS	100	84.184	ENSTRUG00000000041	RBPMS	100	84.184	Takifugu_rubripes
ENSODEG00000006700	RBPMS	100	97.717	ENSTTRG00000012451	RBPMS	100	97.717	Tursiops_truncatus
ENSODEG00000006700	RBPMS	59	95.690	ENSUAMG00000026353	RBPMS	76	95.690	Ursus_americanus
ENSODEG00000006700	RBPMS	90	99.495	ENSUMAG00000007347	RBPMS	96	99.495	Ursus_maritimus
ENSODEG00000006700	RBPMS	90	100.000	ENSVPAG00000010991	RBPMS	100	100.000	Vicugna_pacos
ENSODEG00000006700	RBPMS	100	100.000	ENSVVUG00000019770	RBPMS	100	100.000	Vulpes_vulpes
ENSODEG00000006700	RBPMS	89	93.678	ENSXETG00000011290	rbpms	100	93.678	Xenopus_tropicalis
ENSODEG00000006700	RBPMS	99	76.923	ENSXCOG00000002436	RBPMS	98	77.320	Xiphophorus_couchianus
ENSODEG00000006700	RBPMS	99	84.536	ENSXMAG00000027637	RBPMS	99	84.536	Xiphophorus_maculatus