EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006725 (Gene tree)
Gene ID: 101576206
Gene Symbol: GTF3A
Alias: AP2|TFIIIA
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 9554 bases
Position: chrJH651553.1:4483536-4493089
Accession: 101576206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009001	zf-C2H2	PF00096.26	1.2e-34	1	5
ENSODEP00000009001	zf-C2H2	PF00096.26	1.2e-34	2	5
ENSODEP00000009001	zf-C2H2	PF00096.26	1.2e-34	3	5
ENSODEP00000009001	zf-C2H2	PF00096.26	1.2e-34	4	5
ENSODEP00000009001	zf-C2H2	PF00096.26	1.2e-34	5	5
ENSODEP00000009001	zf-met	PF12874.7	6.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009133	GTF3A-201	1275	XM_004631118	ENSODEP00000009001	424 (aa)	XP_004631175	-

Gene Model

Click here to download ENSODEG00000006725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006725's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006725	GTF3A	61	34.807	ENSODEG00000009980	ZNF582	64	34.807
ENSODEG00000006725	GTF3A	61	37.762	ENSODEG00000000805	-	100	38.983
ENSODEG00000006725	GTF3A	62	35.468	ENSODEG00000002735	ZFP62	85	33.208
ENSODEG00000006725	GTF3A	70	37.748	ENSODEG00000016460	-	74	38.462
ENSODEG00000006725	GTF3A	63	42.105	ENSODEG00000009602	ZNF81	56	42.105
ENSODEG00000006725	GTF3A	62	36.620	ENSODEG00000009193	ZNF112	60	36.620
ENSODEG00000006725	GTF3A	66	38.462	ENSODEG00000005837	ZNF2	63	34.496
ENSODEG00000006725	GTF3A	63	31.466	ENSODEG00000009133	PRDM5	73	31.532
ENSODEG00000006725	GTF3A	70	37.500	ENSODEG00000017047	-	86	37.500
ENSODEG00000006725	GTF3A	64	35.683	ENSODEG00000015543	-	88	37.415
ENSODEG00000006725	GTF3A	59	37.069	ENSODEG00000003654	-	50	37.391
ENSODEG00000006725	GTF3A	64	32.963	ENSODEG00000014404	ZFP1	62	37.069
ENSODEG00000006725	GTF3A	60	35.484	ENSODEG00000014451	MAZ	77	33.333
ENSODEG00000006725	GTF3A	71	32.292	ENSODEG00000008278	-	77	32.963
ENSODEG00000006725	GTF3A	63	38.000	ENSODEG00000008851	-	68	38.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006725	GTF3A	86	81.096	ENSAMEG00000015824	GTF3A	100	80.274	Ailuropoda_melanoleuca
ENSODEG00000006725	GTF3A	84	79.330	ENSBTAG00000012600	GTF3A	99	79.050	Bos_taurus
ENSODEG00000006725	GTF3A	85	81.163	ENSCAFG00000006794	GTF3A	98	80.332	Canis_familiaris
ENSODEG00000006725	GTF3A	92	75.063	ENSCHIG00000021040	-	93	74.055	Capra_hircus
ENSODEG00000006725	GTF3A	84	79.330	ENSCHIG00000010341	-	99	78.212	Capra_hircus
ENSODEG00000006725	GTF3A	79	79.525	ENSTSYG00000004206	GTF3A	97	80.428	Carlito_syrichta
ENSODEG00000006725	GTF3A	75	86.525	ENSCAPG00000015862	GTF3A	99	86.381	Cavia_aperea
ENSODEG00000006725	GTF3A	78	86.405	ENSCPOG00000010143	GTF3A	99	86.667	Cavia_porcellus
ENSODEG00000006725	GTF3A	73	91.318	ENSCLAG00000003912	GTF3A	95	91.318	Chinchilla_lanigera
ENSODEG00000006725	GTF3A	86	79.235	ENSDNOG00000037405	-	86	79.235	Dasypus_novemcinctus
ENSODEG00000006725	GTF3A	81	76.068	ENSETEG00000003225	GTF3A	81	77.350	Echinops_telfairi
ENSODEG00000006725	GTF3A	77	71.779	ENSEASG00005013216	-	86	71.472	Equus_asinus_asinus
ENSODEG00000006725	GTF3A	88	80.214	ENSEASG00005022495	-	83	79.412	Equus_asinus_asinus
ENSODEG00000006725	GTF3A	88	81.283	ENSECAG00000014803	GTF3A	86	82.155	Equus_caballus
ENSODEG00000006725	GTF3A	78	78.419	ENSECAG00000024825	-	75	78.462	Equus_caballus
ENSODEG00000006725	GTF3A	87	76.839	ENSEEUG00000004307	GTF3A	90	77.929	Erinaceus_europaeus
ENSODEG00000006725	GTF3A	88	78.933	ENSFCAG00000006982	GTF3A	93	75.810	Felis_catus
ENSODEG00000006725	GTF3A	73	92.605	ENSFDAG00000016841	GTF3A	96	92.605	Fukomys_damarensis
ENSODEG00000006725	GTF3A	74	91.346	ENSHGLG00000004173	GTF3A	97	91.346	Heterocephalus_glaber_female
ENSODEG00000006725	GTF3A	74	91.346	ENSHGLG00100011561	GTF3A	97	91.346	Heterocephalus_glaber_male
ENSODEG00000006725	GTF3A	74	87.821	ENSSTOG00000013853	GTF3A	99	87.821	Ictidomys_tridecemlineatus
ENSODEG00000006725	GTF3A	77	79.612	ENSJJAG00000011501	Gtf3a	99	79.612	Jaculus_jaculus
ENSODEG00000006725	GTF3A	86	75.405	ENSLAFG00000027315	GTF3A	100	75.405	Loxodonta_africana
ENSODEG00000006725	GTF3A	85	79.282	ENSMAUG00000016253	Gtf3a	97	77.901	Mesocricetus_auratus
ENSODEG00000006725	GTF3A	85	81.944	ENSMICG00000014763	GTF3A	97	81.944	Microcebus_murinus
ENSODEG00000006725	GTF3A	80	81.818	MGP_CAROLIEiJ_G0028031	Gtf3a	97	79.042	Mus_caroli
ENSODEG00000006725	GTF3A	80	81.232	ENSMUSG00000016503	Gtf3a	97	78.443	Mus_musculus
ENSODEG00000006725	GTF3A	80	80.702	MGP_PahariEiJ_G0024597	Gtf3a	97	77.311	Mus_pahari
ENSODEG00000006725	GTF3A	80	81.232	MGP_SPRETEiJ_G0029029	Gtf3a	97	78.443	Mus_spretus
ENSODEG00000006725	GTF3A	86	83.060	ENSMPUG00000005835	GTF3A	99	82.514	Mustela_putorius_furo
ENSODEG00000006725	GTF3A	79	84.985	ENSMLUG00000002158	GTF3A	100	83.784	Myotis_lucifugus
ENSODEG00000006725	GTF3A	86	84.110	ENSNLEG00000000331	GTF3A	100	84.110	Nomascus_leucogenys
ENSODEG00000006725	GTF3A	78	57.704	ENSMEUG00000010089	GTF3A	95	58.589	Notamacropus_eugenii
ENSODEG00000006725	GTF3A	85	73.538	ENSOPRG00000000854	-	94	69.211	Ochotona_princeps
ENSODEG00000006725	GTF3A	87	80.163	ENSOCUG00000011713	GTF3A	83	80.163	Oryctolagus_cuniculus
ENSODEG00000006725	GTF3A	86	82.514	ENSOGAG00000014589	GTF3A	100	82.514	Otolemur_garnettii
ENSODEG00000006725	GTF3A	84	75.419	ENSOARG00000012551	GTF3A	98	74.302	Ovis_aries
ENSODEG00000006725	GTF3A	86	82.192	ENSPPRG00000002368	GTF3A	100	81.370	Panthera_pardus
ENSODEG00000006725	GTF3A	77	81.879	ENSPTIG00000018958	GTF3A	82	81.879	Panthera_tigris_altaica
ENSODEG00000006725	GTF3A	75	50.394	ENSPSIG00000011722	GTF3A	99	50.190	Pelodiscus_sinensis
ENSODEG00000006725	GTF3A	84	84.078	ENSPPYG00000005235	GTF3A	99	84.078	Pongo_abelii
ENSODEG00000006725	GTF3A	87	79.625	ENSPCOG00000016742	GTF3A	83	80.217	Propithecus_coquereli
ENSODEG00000006725	GTF3A	85	78.830	ENSPVAG00000012837	GTF3A	85	78.273	Pteropus_vampyrus
ENSODEG00000006725	GTF3A	86	76.986	ENSRROG00000043264	GTF3A	100	76.986	Rhinopithecus_roxellana
ENSODEG00000006725	GTF3A	77	76.220	ENSSHAG00000016965	GTF3A	92	76.687	Sarcophilus_harrisii
ENSODEG00000006725	GTF3A	74	74.841	ENSSARG00000010692	GTF3A	87	74.841	Sorex_araneus
ENSODEG00000006725	GTF3A	79	63.905	ENSSPUG00000005307	GTF3A	87	65.749	Sphenodon_punctatus
ENSODEG00000006725	GTF3A	63	47.015	ENSTRUG00000005241	gtf3ab	89	44.951	Takifugu_rubripes
ENSODEG00000006725	GTF3A	67	86.328	ENSTBEG00000012075	GTF3A	61	86.328	Tupaia_belangeri
ENSODEG00000006725	GTF3A	94	68.812	ENSTTRG00000008538	GTF3A	98	68.812	Tursiops_truncatus
ENSODEG00000006725	GTF3A	86	81.918	ENSUAMG00000019189	GTF3A	100	81.096	Ursus_americanus
ENSODEG00000006725	GTF3A	79	80.357	ENSUMAG00000016941	GTF3A	99	82.119	Ursus_maritimus
ENSODEG00000006725	GTF3A	75	82.414	ENSVPAG00000004995	GTF3A	97	82.414	Vicugna_pacos
ENSODEG00000006725	GTF3A	86	80.601	ENSVVUG00000009197	GTF3A	100	79.781	Vulpes_vulpes