EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006793 (Gene tree)
Gene ID: 101569606
Gene Symbol: -
Alias: -
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 72312 bases
Position: chrJH651566.1:13453867-13526178
Accession: 101569606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009097	RNase_H2-Ydr279	PF09468.10	2.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009233	-	924	XM_004633134	ENSODEP00000009097	307 (aa)	-	-
ENSODET00000009234	-	1005	-	ENSODEP00000009098	65 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006793's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006793	-	78	84.583	ENSODEG00000005412	-	95	84.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006793	-	100	83.495	ENSG00000136104	RNASEH2B	100	86.517	Homo_sapiens
ENSODEG00000006793	-	90	51.264	ENSAPOG00000010496	rnaseh2b	90	51.264	Acanthochromis_polyacanthus
ENSODEG00000006793	-	92	82.517	ENSAMEG00000012040	RNASEH2B	97	82.517	Ailuropoda_melanoleuca
ENSODEG00000006793	-	83	47.860	ENSACIG00000021991	rnaseh2b	95	48.990	Amphilophus_citrinellus
ENSODEG00000006793	-	87	51.493	ENSAOCG00000013398	rnaseh2b	87	51.493	Amphiprion_ocellaris
ENSODEG00000006793	-	87	51.493	ENSAPEG00000006033	rnaseh2b	87	51.493	Amphiprion_percula
ENSODEG00000006793	-	87	53.731	ENSATEG00000008370	rnaseh2b	87	53.731	Anabas_testudineus
ENSODEG00000006793	-	83	63.813	ENSAPLG00000008955	RNASEH2B	99	63.569	Anas_platyrhynchos
ENSODEG00000006793	-	93	57.986	ENSACAG00000011679	RNASEH2B	97	57.986	Anolis_carolinensis
ENSODEG00000006793	-	100	83.495	ENSANAG00000020662	RNASEH2B	100	83.495	Aotus_nancymaae
ENSODEG00000006793	-	93	49.653	ENSACLG00000000467	rnaseh2b	93	49.653	Astatotilapia_calliptera
ENSODEG00000006793	-	94	51.211	ENSAMXG00000014351	rnaseh2b	94	51.211	Astyanax_mexicanus
ENSODEG00000006793	-	98	80.656	ENSBTAG00000020149	RNASEH2B	99	80.656	Bos_taurus
ENSODEG00000006793	-	97	83.389	ENSCJAG00000008585	-	99	83.389	Callithrix_jacchus
ENSODEG00000006793	-	80	79.757	ENSCJAG00000003822	-	92	79.757	Callithrix_jacchus
ENSODEG00000006793	-	95	80.756	ENSCAFG00000004295	RNASEH2B	98	77.333	Canis_familiaris
ENSODEG00000006793	-	100	80.130	ENSCAFG00020000250	RNASEH2B	100	80.130	Canis_lupus_dingo
ENSODEG00000006793	-	98	81.126	ENSCHIG00000018220	RNASEH2B	99	81.126	Capra_hircus
ENSODEG00000006793	-	78	71.008	ENSCHIG00000012982	-	84	71.008	Capra_hircus
ENSODEG00000006793	-	96	69.492	ENSTSYG00000031177	-	97	69.492	Carlito_syrichta
ENSODEG00000006793	-	94	82.639	ENSTSYG00000009176	-	95	81.787	Carlito_syrichta
ENSODEG00000006793	-	93	79.861	ENSCAPG00000009978	RNASEH2B	97	80.277	Cavia_aperea
ENSODEG00000006793	-	97	86.667	ENSCPOG00000032527	RNASEH2B	99	86.645	Cavia_porcellus
ENSODEG00000006793	-	99	83.442	ENSCCAG00000026979	RNASEH2B	99	83.442	Cebus_capucinus
ENSODEG00000006793	-	95	83.959	ENSCATG00000031336	RNASEH2B	83	83.959	Cercocebus_atys
ENSODEG00000006793	-	94	91.319	ENSCLAG00000003517	RNASEH2B	79	91.319	Chinchilla_lanigera
ENSODEG00000006793	-	100	80.769	ENSCSAG00000017701	RNASEH2B	95	80.769	Chlorocebus_sabaeus
ENSODEG00000006793	-	97	69.508	ENSCHOG00000013688	RNASEH2B	99	69.508	Choloepus_hoffmanni
ENSODEG00000006793	-	95	60.959	ENSCPBG00000008684	RNASEH2B	90	60.959	Chrysemys_picta_bellii
ENSODEG00000006793	-	94	38.538	ENSCING00000016454	-	96	36.789	Ciona_intestinalis
ENSODEG00000006793	-	100	82.692	ENSCANG00000041511	-	100	82.692	Colobus_angolensis_palliatus
ENSODEG00000006793	-	98	82.178	ENSCGRG00001000611	Rnaseh2b	99	82.178	Cricetulus_griseus_chok1gshd
ENSODEG00000006793	-	98	82.178	ENSCGRG00000006077	Rnaseh2b	99	82.178	Cricetulus_griseus_crigri
ENSODEG00000006793	-	87	52.985	ENSCSEG00000004910	rnaseh2b	90	52.918	Cynoglossus_semilaevis
ENSODEG00000006793	-	87	50.746	ENSCVAG00000005212	rnaseh2b	87	50.746	Cyprinodon_variegatus
ENSODEG00000006793	-	94	51.379	ENSDARG00000005128	rnaseh2b	94	51.379	Danio_rerio
ENSODEG00000006793	-	93	75.524	ENSDNOG00000049666	-	93	75.524	Dasypus_novemcinctus
ENSODEG00000006793	-	99	73.115	ENSDNOG00000034290	-	99	73.115	Dasypus_novemcinctus
ENSODEG00000006793	-	100	81.553	ENSDORG00000010708	Rnaseh2b	100	81.553	Dipodomys_ordii
ENSODEG00000006793	-	83	41.245	ENSEBUG00000005965	rnaseh2b	97	42.188	Eptatretus_burgeri
ENSODEG00000006793	-	99	85.809	ENSEASG00005017323	RNASEH2B	98	85.809	Equus_asinus_asinus
ENSODEG00000006793	-	99	85.809	ENSECAG00000014262	RNASEH2B	98	85.809	Equus_caballus
ENSODEG00000006793	-	94	48.966	ENSELUG00000019560	rnaseh2b	94	48.966	Esox_lucius
ENSODEG00000006793	-	93	81.882	ENSFCAG00000014257	RNASEH2B	90	81.882	Felis_catus
ENSODEG00000006793	-	92	59.717	ENSFALG00000008435	RNASEH2B	96	59.717	Ficedula_albicollis
ENSODEG00000006793	-	93	88.112	ENSFDAG00000009920	RNASEH2B	99	88.112	Fukomys_damarensis
ENSODEG00000006793	-	87	51.493	ENSFHEG00000012160	rnaseh2b	87	51.493	Fundulus_heteroclitus
ENSODEG00000006793	-	83	49.810	ENSGMOG00000016830	rnaseh2b	91	49.810	Gadus_morhua
ENSODEG00000006793	-	92	59.859	ENSGALG00000017015	RNASEH2B	96	59.797	Gallus_gallus
ENSODEG00000006793	-	87	51.493	ENSGAFG00000021222	rnaseh2b	87	51.493	Gambusia_affinis
ENSODEG00000006793	-	87	51.095	ENSGACG00000002821	rnaseh2b	88	51.095	Gasterosteus_aculeatus
ENSODEG00000006793	-	88	62.731	ENSGAGG00000014722	RNASEH2B	97	62.731	Gopherus_agassizii
ENSODEG00000006793	-	100	83.013	ENSGGOG00000001044	RNASEH2B	100	83.013	Gorilla_gorilla
ENSODEG00000006793	-	93	49.306	ENSHBUG00000006049	rnaseh2b	93	49.306	Haplochromis_burtoni
ENSODEG00000006793	-	94	90.278	ENSHGLG00100015953	RNASEH2B	98	90.278	Heterocephalus_glaber_male
ENSODEG00000006793	-	87	49.071	ENSHCOG00000003318	rnaseh2b	86	52.245	Hippocampus_comes
ENSODEG00000006793	-	94	51.890	ENSIPUG00000023815	rnaseh2b	95	51.712	Ictalurus_punctatus
ENSODEG00000006793	-	92	85.159	ENSSTOG00000015126	RNASEH2B	97	85.159	Ictidomys_tridecemlineatus
ENSODEG00000006793	-	93	83.217	ENSJJAG00000013335	Rnaseh2b	97	83.217	Jaculus_jaculus
ENSODEG00000006793	-	87	51.493	ENSKMAG00000002198	rnaseh2b	87	51.493	Kryptolebias_marmoratus
ENSODEG00000006793	-	87	53.731	ENSLBEG00000019331	rnaseh2b	87	53.731	Labrus_bergylta
ENSODEG00000006793	-	68	58.768	ENSLACG00000010782	RNASEH2B	90	59.193	Latimeria_chalumnae
ENSODEG00000006793	-	95	53.425	ENSLOCG00000009296	rnaseh2b	95	53.425	Lepisosteus_oculatus
ENSODEG00000006793	-	98	76.159	ENSLAFG00000030158	RNASEH2B	98	76.159	Loxodonta_africana
ENSODEG00000006793	-	100	83.495	ENSMFAG00000038464	-	100	83.495	Macaca_fascicularis
ENSODEG00000006793	-	100	75.405	ENSMMUG00000021746	RNASEH2B	96	83.607	Macaca_mulatta
ENSODEG00000006793	-	100	83.495	ENSMNEG00000030580	RNASEH2B	100	83.495	Macaca_nemestrina
ENSODEG00000006793	-	100	82.692	ENSMLEG00000043911	-	100	82.692	Mandrillus_leucophaeus
ENSODEG00000006793	-	87	52.612	ENSMAMG00000017109	rnaseh2b	87	52.612	Mastacembelus_armatus
ENSODEG00000006793	-	85	51.711	ENSMZEG00005021926	rnaseh2b	86	51.711	Maylandia_zebra
ENSODEG00000006793	-	88	59.926	ENSMGAG00000015025	RNASEH2B	99	59.859	Meleagris_gallopavo
ENSODEG00000006793	-	98	79.868	ENSMAUG00000016520	Rnaseh2b	99	79.868	Mesocricetus_auratus
ENSODEG00000006793	-	98	84.868	ENSMICG00000000528	RNASEH2B	99	84.868	Microcebus_murinus
ENSODEG00000006793	-	87	52.612	ENSMMOG00000019799	rnaseh2b	93	52.612	Mola_mola
ENSODEG00000006793	-	94	65.172	ENSMODG00000010775	RNASEH2B	95	65.172	Monodelphis_domestica
ENSODEG00000006793	-	87	51.119	ENSMALG00000004463	rnaseh2b	88	51.119	Monopterus_albus
ENSODEG00000006793	-	98	69.408	MGP_CAROLIEiJ_G0019389	Rnaseh2b	99	69.408	Mus_caroli
ENSODEG00000006793	-	98	80.263	ENSMUSG00000021932	Rnaseh2b	99	80.263	Mus_musculus
ENSODEG00000006793	-	98	64.535	MGP_PahariEiJ_G0030407	-	99	63.663	Mus_pahari
ENSODEG00000006793	-	73	82.511	ENSMPUG00000018010	RNASEH2B	94	82.511	Mustela_putorius_furo
ENSODEG00000006793	-	98	82.724	ENSMLUG00000004065	-	97	82.724	Myotis_lucifugus
ENSODEG00000006793	-	93	49.306	ENSNBRG00000003253	rnaseh2b	93	49.306	Neolamprologus_brichardi
ENSODEG00000006793	-	100	82.692	ENSNLEG00000003804	RNASEH2B	100	82.692	Nomascus_leucogenys
ENSODEG00000006793	-	93	63.322	ENSMEUG00000003665	RNASEH2B	99	63.763	Notamacropus_eugenii
ENSODEG00000006793	-	51	82.278	ENSOPRG00000003695	-	78	61.538	Ochotona_princeps
ENSODEG00000006793	-	93	48.264	ENSONIG00000006657	rnaseh2b	93	48.264	Oreochromis_niloticus
ENSODEG00000006793	-	91	63.986	ENSOANG00000015537	RNASEH2B	99	63.986	Ornithorhynchus_anatinus
ENSODEG00000006793	-	99	80.328	ENSOCUG00000008904	RNASEH2B	96	80.328	Oryctolagus_cuniculus
ENSODEG00000006793	-	93	49.306	ENSORLG00000011850	rnaseh2b	95	49.653	Oryzias_latipes
ENSODEG00000006793	-	93	50.347	ENSORLG00020012081	rnaseh2b	95	50.347	Oryzias_latipes_hni
ENSODEG00000006793	-	93	50.347	ENSORLG00015015468	rnaseh2b	95	50.347	Oryzias_latipes_hsok
ENSODEG00000006793	-	93	48.958	ENSOMEG00000012441	rnaseh2b	95	48.611	Oryzias_melastigma
ENSODEG00000006793	-	95	80.612	ENSOGAG00000016486	RNASEH2B	99	80.068	Otolemur_garnettii
ENSODEG00000006793	-	94	81.724	ENSOARG00000008701	RNASEH2B	99	81.164	Ovis_aries
ENSODEG00000006793	-	91	85.106	ENSPPAG00000026374	RNASEH2B	96	85.253	Pan_paniscus
ENSODEG00000006793	-	97	80.528	ENSPPRG00000012450	RNASEH2B	99	80.528	Panthera_pardus
ENSODEG00000006793	-	90	82.079	ENSPTIG00000013918	RNASEH2B	99	82.079	Panthera_tigris_altaica
ENSODEG00000006793	-	99	83.442	ENSPTRG00000005886	RNASEH2B	98	85.252	Pan_troglodytes
ENSODEG00000006793	-	100	82.372	ENSPANG00000022424	-	100	82.372	Papio_anubis
ENSODEG00000006793	-	93	47.222	ENSPKIG00000013386	rnaseh2b	90	48.561	Paramormyrops_kingsleyae
ENSODEG00000006793	-	62	54.450	ENSPSIG00000002224	RNASEH2B	89	54.450	Pelodiscus_sinensis
ENSODEG00000006793	-	65	53.465	ENSPMGG00000010299	rnaseh2b	98	52.970	Periophthalmus_magnuspinnatus
ENSODEG00000006793	-	98	81.518	ENSPEMG00000019721	Rnaseh2b	99	81.518	Peromyscus_maniculatus_bairdii
ENSODEG00000006793	-	89	60.806	ENSPCIG00000014535	-	92	60.806	Phascolarctos_cinereus
ENSODEG00000006793	-	87	51.852	ENSPFOG00000016722	rnaseh2b	87	51.852	Poecilia_formosa
ENSODEG00000006793	-	87	52.239	ENSPLAG00000011755	rnaseh2b	87	52.239	Poecilia_latipinna
ENSODEG00000006793	-	87	52.239	ENSPMEG00000002721	rnaseh2b	87	52.239	Poecilia_mexicana
ENSODEG00000006793	-	87	52.239	ENSPREG00000007737	rnaseh2b	87	52.239	Poecilia_reticulata
ENSODEG00000006793	-	100	83.013	ENSPPYG00000005378	RNASEH2B	100	82.372	Pongo_abelii
ENSODEG00000006793	-	98	85.574	ENSPCOG00000026623	RNASEH2B	99	85.574	Propithecus_coquereli
ENSODEG00000006793	-	81	82.213	ENSPVAG00000000508	RNASEH2B	99	78.967	Pteropus_vampyrus
ENSODEG00000006793	-	93	49.306	ENSPNYG00000013552	rnaseh2b	93	49.306	Pundamilia_nyererei
ENSODEG00000006793	-	94	50.000	ENSPNAG00000024825	rnaseh2b	94	50.000	Pygocentrus_nattereri
ENSODEG00000006793	-	98	79.868	ENSRNOG00000009192	Rnaseh2b	99	79.868	Rattus_norvegicus
ENSODEG00000006793	-	100	83.172	ENSRBIG00000028928	-	100	83.172	Rhinopithecus_bieti
ENSODEG00000006793	-	97	71.044	ENSRBIG00000036017	-	97	71.044	Rhinopithecus_bieti
ENSODEG00000006793	-	79	67.213	ENSRROG00000044915	-	92	67.213	Rhinopithecus_roxellana
ENSODEG00000006793	-	100	83.172	ENSRROG00000018808	-	100	83.172	Rhinopithecus_roxellana
ENSODEG00000006793	-	98	83.553	ENSSBOG00000008081	RNASEH2B	100	86.022	Saimiri_boliviensis_boliviensis
ENSODEG00000006793	-	94	65.172	ENSSHAG00000016190	RNASEH2B	94	65.172	Sarcophilus_harrisii
ENSODEG00000006793	-	93	49.653	ENSSFOG00015010190	rnaseh2b	94	49.653	Scleropages_formosus
ENSODEG00000006793	-	87	52.045	ENSSMAG00000001546	rnaseh2b	87	52.045	Scophthalmus_maximus
ENSODEG00000006793	-	87	52.985	ENSSDUG00000007567	rnaseh2b	87	52.985	Seriola_dumerili
ENSODEG00000006793	-	90	51.079	ENSSLDG00000012485	rnaseh2b	92	51.079	Seriola_lalandi_dorsalis
ENSODEG00000006793	-	85	59.160	ENSSPUG00000006745	-	94	59.160	Sphenodon_punctatus
ENSODEG00000006793	-	87	53.358	ENSSPAG00000020926	rnaseh2b	87	53.358	Stegastes_partitus
ENSODEG00000006793	-	91	83.513	ENSSSCG00000024385	RNASEH2B	100	83.529	Sus_scrofa
ENSODEG00000006793	-	87	61.338	ENSTGUG00000012104	RNASEH2B	99	61.338	Taeniopygia_guttata
ENSODEG00000006793	-	87	54.478	ENSTRUG00000015098	rnaseh2b	87	54.478	Takifugu_rubripes
ENSODEG00000006793	-	88	53.650	ENSTNIG00000013861	rnaseh2b	89	53.650	Tetraodon_nigroviridis
ENSODEG00000006793	-	93	76.125	ENSTTRG00000010761	RNASEH2B	99	73.548	Tursiops_truncatus
ENSODEG00000006793	-	92	84.099	ENSUAMG00000022849	RNASEH2B	99	83.942	Ursus_americanus
ENSODEG00000006793	-	92	83.039	ENSUMAG00000018556	RNASEH2B	99	82.847	Ursus_maritimus
ENSODEG00000006793	-	93	83.972	ENSVPAG00000005679	RNASEH2B	99	83.972	Vicugna_pacos
ENSODEG00000006793	-	93	80.634	ENSVVUG00000024015	RNASEH2B	85	80.634	Vulpes_vulpes
ENSODEG00000006793	-	95	56.314	ENSXETG00000020720	rnaseh2b	95	56.314	Xenopus_tropicalis
ENSODEG00000006793	-	88	50.735	ENSXCOG00000018732	rnaseh2b	91	50.735	Xiphophorus_couchianus
ENSODEG00000006793	-	87	52.612	ENSXMAG00000022554	rnaseh2b	87	52.612	Xiphophorus_maculatus