EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000006824 (Gene tree)
Gene ID: 101559696
Gene Symbol: ESF1
Alias: -
Full Name: ESF1 nucleolar pre-rRNA processing protein homolog
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 62004 bases
Position: chrJH651575.1:12825734-12887737
Accession: 101559696
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009134	NUC153	PF08159.12	1.5e-11	1	1
ENSODEP00000009133	NUC153	PF08159.12	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009269	ESF1-201	2528	XM_004634309	ENSODEP00000009133	830 (aa)	XP_004634366	UPI000333BF55
ENSODET00000009270	ESF1-202	2445	-	ENSODEP00000009134	814 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006824's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006824	ESF1	100	81.477	ENSG00000089048	ESF1	99	84.292	Homo_sapiens
ENSODEG00000006824	ESF1	61	55.238	ENSAPOG00000003004	esf1	99	55.238	Acanthochromis_polyacanthus
ENSODEG00000006824	ESF1	100	78.830	ENSAMEG00000008830	ESF1	100	78.246	Ailuropoda_melanoleuca
ENSODEG00000006824	ESF1	79	69.333	ENSACIG00000018305	esf1	95	69.444	Amphilophus_citrinellus
ENSODEG00000006824	ESF1	82	72.727	ENSAOCG00000006033	esf1	92	72.222	Amphiprion_ocellaris
ENSODEG00000006824	ESF1	82	72.727	ENSAPEG00000022385	esf1	93	72.222	Amphiprion_percula
ENSODEG00000006824	ESF1	79	71.622	ENSATEG00000016321	esf1	85	72.222	Anabas_testudineus
ENSODEG00000006824	ESF1	68	74.281	ENSAPLG00000012113	ESF1	100	61.657	Anas_platyrhynchos
ENSODEG00000006824	ESF1	100	60.070	ENSACAG00000000963	ESF1	100	60.635	Anolis_carolinensis
ENSODEG00000006824	ESF1	100	81.882	ENSANAG00000036778	ESF1	100	82.000	Aotus_nancymaae
ENSODEG00000006824	ESF1	81	68.831	ENSACLG00000002972	esf1	92	68.056	Astatotilapia_calliptera
ENSODEG00000006824	ESF1	78	63.204	ENSAMXG00000001172	esf1	92	62.500	Astyanax_mexicanus
ENSODEG00000006824	ESF1	100	79.162	ENSBTAG00000007130	ESF1	100	79.627	Bos_taurus
ENSODEG00000006824	ESF1	100	81.560	ENSCJAG00000004640	ESF1	100	82.033	Callithrix_jacchus
ENSODEG00000006824	ESF1	100	80.588	ENSCAFG00000005587	ESF1	100	80.000	Canis_familiaris
ENSODEG00000006824	ESF1	100	80.588	ENSCAFG00020027530	ESF1	100	80.000	Canis_lupus_dingo
ENSODEG00000006824	ESF1	100	81.159	ENSCHIG00000021188	ESF1	100	81.159	Capra_hircus
ENSODEG00000006824	ESF1	100	81.420	ENSTSYG00000009956	ESF1	100	81.657	Carlito_syrichta
ENSODEG00000006824	ESF1	83	86.290	ENSCAPG00000010333	-	100	89.516	Cavia_aperea
ENSODEG00000006824	ESF1	100	72.989	ENSCAPG00000010466	-	100	72.029	Cavia_aperea
ENSODEG00000006824	ESF1	100	87.035	ENSCPOG00000014027	-	100	87.275	Cavia_porcellus
ENSODEG00000006824	ESF1	100	82.193	ENSCCAG00000024521	ESF1	100	82.429	Cebus_capucinus
ENSODEG00000006824	ESF1	100	81.808	ENSCATG00000042792	ESF1	100	82.277	Cercocebus_atys
ENSODEG00000006824	ESF1	100	89.568	ENSCLAG00000013266	-	100	90.048	Chinchilla_lanigera
ENSODEG00000006824	ESF1	100	81.250	ENSCSAG00000011777	ESF1	100	82.000	Chlorocebus_sabaeus
ENSODEG00000006824	ESF1	100	81.616	ENSCANG00000030674	ESF1	100	82.084	Colobus_angolensis_palliatus
ENSODEG00000006824	ESF1	100	79.619	ENSCGRG00001018257	Esf1	100	80.572	Cricetulus_griseus_chok1gshd
ENSODEG00000006824	ESF1	76	63.077	ENSCSEG00000001159	esf1	90	63.492	Cynoglossus_semilaevis
ENSODEG00000006824	ESF1	76	73.846	ENSCVAG00000007894	esf1	96	66.667	Cyprinodon_variegatus
ENSODEG00000006824	ESF1	77	67.568	ENSDARG00000008740	esf1	86	68.056	Danio_rerio
ENSODEG00000006824	ESF1	100	78.698	ENSDNOG00000019409	ESF1	100	79.645	Dasypus_novemcinctus
ENSODEG00000006824	ESF1	100	82.437	ENSDORG00000016313	Esf1	100	82.915	Dipodomys_ordii
ENSODEG00000006824	ESF1	72	49.412	FBgn0024364	CG11417	80	54.286	Drosophila_melanogaster
ENSODEG00000006824	ESF1	83	82.090	ENSETEG00000004471	ESF1	79	82.090	Echinops_telfairi
ENSODEG00000006824	ESF1	99	44.354	ENSEBUG00000015161	esf1	99	44.457	Eptatretus_burgeri
ENSODEG00000006824	ESF1	100	80.683	ENSEASG00005001777	ESF1	100	81.037	Equus_asinus_asinus
ENSODEG00000006824	ESF1	100	80.660	ENSECAG00000019188	ESF1	100	81.014	Equus_caballus
ENSODEG00000006824	ESF1	73	60.323	ENSEEUG00000015837	-	97	60.484	Erinaceus_europaeus
ENSODEG00000006824	ESF1	100	80.513	ENSFCAG00000000919	ESF1	100	80.047	Felis_catus
ENSODEG00000006824	ESF1	68	74.775	ENSFALG00000010914	ESF1	99	62.427	Ficedula_albicollis
ENSODEG00000006824	ESF1	100	86.779	ENSFDAG00000014777	ESF1	100	86.899	Fukomys_damarensis
ENSODEG00000006824	ESF1	61	60.474	ENSFHEG00000014984	esf1	99	61.067	Fundulus_heteroclitus
ENSODEG00000006824	ESF1	100	61.737	ENSGALG00000034768	ESF1	100	60.995	Gallus_gallus
ENSODEG00000006824	ESF1	78	66.216	ENSGAFG00000000540	esf1	96	66.667	Gambusia_affinis
ENSODEG00000006824	ESF1	100	81.243	ENSGGOG00000006692	ESF1	100	82.181	Gorilla_gorilla
ENSODEG00000006824	ESF1	81	70.130	ENSHBUG00000001890	esf1	88	69.444	Haplochromis_burtoni
ENSODEG00000006824	ESF1	100	87.019	ENSHGLG00000011505	ESF1	100	87.620	Heterocephalus_glaber_female
ENSODEG00000006824	ESF1	100	87.019	ENSHGLG00100015045	ESF1	100	87.620	Heterocephalus_glaber_male
ENSODEG00000006824	ESF1	77	66.667	ENSIPUG00000006507	esf1	92	59.900	Ictalurus_punctatus
ENSODEG00000006824	ESF1	100	82.796	ENSSTOG00000009846	ESF1	100	83.771	Ictidomys_tridecemlineatus
ENSODEG00000006824	ESF1	100	79.221	ENSJJAG00000012570	Esf1	100	79.457	Jaculus_jaculus
ENSODEG00000006824	ESF1	68	68.430	ENSLACG00000016439	ESF1	99	56.932	Latimeria_chalumnae
ENSODEG00000006824	ESF1	68	63.589	ENSLOCG00000015979	esf1	73	64.111	Lepisosteus_oculatus
ENSODEG00000006824	ESF1	100	81.310	ENSLAFG00000005479	ESF1	100	81.667	Loxodonta_africana
ENSODEG00000006824	ESF1	100	81.808	ENSMFAG00000036841	ESF1	100	82.277	Macaca_fascicularis
ENSODEG00000006824	ESF1	100	81.690	ENSMNEG00000044042	ESF1	100	82.160	Macaca_nemestrina
ENSODEG00000006824	ESF1	100	81.573	ENSMLEG00000037121	ESF1	100	82.042	Mandrillus_leucophaeus
ENSODEG00000006824	ESF1	79	71.622	ENSMAMG00000018648	esf1	92	72.222	Mastacembelus_armatus
ENSODEG00000006824	ESF1	61	58.532	ENSMZEG00005013912	esf1	99	57.937	Maylandia_zebra
ENSODEG00000006824	ESF1	100	60.803	ENSMGAG00000004291	ESF1	100	60.140	Meleagris_gallopavo
ENSODEG00000006824	ESF1	100	80.095	ENSMAUG00000015975	Esf1	100	80.453	Mesocricetus_auratus
ENSODEG00000006824	ESF1	100	82.374	ENSMICG00000010711	ESF1	100	82.961	Microcebus_murinus
ENSODEG00000006824	ESF1	100	78.784	ENSMOCG00000005902	Esf1	100	78.878	Microtus_ochrogaster
ENSODEG00000006824	ESF1	61	58.745	ENSMMOG00000018693	esf1	99	60.077	Mola_mola
ENSODEG00000006824	ESF1	100	71.034	ENSMODG00000005066	ESF1	100	71.480	Monodelphis_domestica
ENSODEG00000006824	ESF1	71	67.568	ENSMALG00000007338	esf1	90	68.056	Monopterus_albus
ENSODEG00000006824	ESF1	100	79.478	MGP_CAROLIEiJ_G0024365	Esf1	100	79.597	Mus_caroli
ENSODEG00000006824	ESF1	100	78.369	ENSMUSG00000045624	Esf1	100	79.314	Mus_musculus
ENSODEG00000006824	ESF1	100	78.741	MGP_PahariEiJ_G0025810	Esf1	100	78.979	Mus_pahari
ENSODEG00000006824	ESF1	100	78.954	MGP_SPRETEiJ_G0025285	Esf1	98	83.221	Mus_spretus
ENSODEG00000006824	ESF1	100	81.316	ENSMPUG00000001450	ESF1	100	81.059	Mustela_putorius_furo
ENSODEG00000006824	ESF1	100	81.250	ENSMLUG00000013080	ESF1	100	81.250	Myotis_lucifugus
ENSODEG00000006824	ESF1	100	79.719	ENSNLEG00000014563	ESF1	100	80.774	Nomascus_leucogenys
ENSODEG00000006824	ESF1	59	96.000	ENSMEUG00000005061	-	57	96.000	Notamacropus_eugenii
ENSODEG00000006824	ESF1	62	82.806	ENSOPRG00000004862	ESF1	100	82.806	Ochotona_princeps
ENSODEG00000006824	ESF1	81	70.130	ENSONIG00000006804	esf1	99	51.476	Oreochromis_niloticus
ENSODEG00000006824	ESF1	100	69.421	ENSOANG00000008432	-	100	71.225	Ornithorhynchus_anatinus
ENSODEG00000006824	ESF1	100	79.359	ENSOCUG00000005414	ESF1	100	78.973	Oryctolagus_cuniculus
ENSODEG00000006824	ESF1	61	54.167	ENSORLG00000018625	esf1	99	52.841	Oryzias_latipes
ENSODEG00000006824	ESF1	77	67.949	ENSORLG00015022826	esf1	91	66.667	Oryzias_latipes_hsok
ENSODEG00000006824	ESF1	61	54.598	ENSOMEG00000009311	esf1	99	54.215	Oryzias_melastigma
ENSODEG00000006824	ESF1	100	78.188	ENSOGAG00000016912	ESF1	100	78.427	Otolemur_garnettii
ENSODEG00000006824	ESF1	100	77.614	ENSOARG00000011158	ESF1	100	78.182	Ovis_aries
ENSODEG00000006824	ESF1	100	82.054	ENSPPAG00000024379	ESF1	100	81.700	Pan_paniscus
ENSODEG00000006824	ESF1	100	80.796	ENSPPRG00000012007	ESF1	100	80.445	Panthera_pardus
ENSODEG00000006824	ESF1	100	80.305	ENSPTIG00000020063	ESF1	100	80.422	Panthera_tigris_altaica
ENSODEG00000006824	ESF1	100	81.030	ENSPTRG00000013258	ESF1	100	82.201	Pan_troglodytes
ENSODEG00000006824	ESF1	68	64.014	ENSPKIG00000024448	esf1	96	53.783	Paramormyrops_kingsleyae
ENSODEG00000006824	ESF1	81	63.636	ENSPMGG00000016911	esf1	87	63.889	Periophthalmus_magnuspinnatus
ENSODEG00000006824	ESF1	100	72.010	ENSPCIG00000019331	ESF1	100	72.608	Phascolarctos_cinereus
ENSODEG00000006824	ESF1	80	62.162	ENSPFOG00000010101	esf1	88	63.889	Poecilia_formosa
ENSODEG00000006824	ESF1	61	59.449	ENSPLAG00000006452	esf1	99	58.858	Poecilia_latipinna
ENSODEG00000006824	ESF1	78	63.514	ENSPMEG00000000713	esf1	94	63.889	Poecilia_mexicana
ENSODEG00000006824	ESF1	78	63.514	ENSPREG00000004431	esf1	86	63.889	Poecilia_reticulata
ENSODEG00000006824	ESF1	100	81.499	ENSPPYG00000010715	ESF1	100	82.670	Pongo_abelii
ENSODEG00000006824	ESF1	100	74.052	ENSPCAG00000006881	ESF1	100	74.171	Procavia_capensis
ENSODEG00000006824	ESF1	83	94.444	ENSPVAG00000001295	ESF1	83	94.444	Pteropus_vampyrus
ENSODEG00000006824	ESF1	81	67.532	ENSPNYG00000015735	esf1	88	68.056	Pundamilia_nyererei
ENSODEG00000006824	ESF1	77	62.162	ENSPNAG00000014721	esf1	88	62.500	Pygocentrus_nattereri
ENSODEG00000006824	ESF1	100	78.656	ENSRNOG00000004777	Esf1	100	79.363	Rattus_norvegicus
ENSODEG00000006824	ESF1	100	81.434	ENSRBIG00000035763	ESF1	100	81.904	Rhinopithecus_bieti
ENSODEG00000006824	ESF1	100	81.712	ENSRROG00000032022	ESF1	100	82.298	Rhinopithecus_roxellana
ENSODEG00000006824	ESF1	57	34.320	YDR365C	-	73	33.988	Saccharomyces_cerevisiae
ENSODEG00000006824	ESF1	100	80.964	ENSSBOG00000030387	ESF1	100	81.690	Saimiri_boliviensis_boliviensis
ENSODEG00000006824	ESF1	100	71.807	ENSSHAG00000000449	ESF1	100	71.807	Sarcophilus_harrisii
ENSODEG00000006824	ESF1	78	70.270	ENSSDUG00000019460	esf1	98	70.833	Seriola_dumerili
ENSODEG00000006824	ESF1	100	62.410	ENSSPUG00000012635	ESF1	100	62.395	Sphenodon_punctatus
ENSODEG00000006824	ESF1	78	70.513	ENSSPAG00000019077	esf1	93	70.833	Stegastes_partitus
ENSODEG00000006824	ESF1	100	79.326	ENSSSCG00000007077	ESF1	100	80.023	Sus_scrofa
ENSODEG00000006824	ESF1	100	59.516	ENSTGUG00000002450	ESF1	100	60.390	Taeniopygia_guttata
ENSODEG00000006824	ESF1	85	57.751	ENSTRUG00000009445	esf1	98	65.278	Takifugu_rubripes
ENSODEG00000006824	ESF1	74	87.226	ENSTBEG00000008552	ESF1	72	92.466	Tupaia_belangeri
ENSODEG00000006824	ESF1	100	78.220	ENSTTRG00000005335	ESF1	100	79.859	Tursiops_truncatus
ENSODEG00000006824	ESF1	100	80.399	ENSUMAG00000008579	ESF1	100	81.338	Ursus_maritimus
ENSODEG00000006824	ESF1	100	74.350	ENSVPAG00000005291	ESF1	100	75.177	Vicugna_pacos
ENSODEG00000006824	ESF1	100	79.294	ENSVVUG00000014318	ESF1	93	79.529	Vulpes_vulpes
ENSODEG00000006824	ESF1	68	66.197	ENSXETG00000008079	esf1	100	57.160	Xenopus_tropicalis
ENSODEG00000006824	ESF1	78	66.216	ENSXMAG00000017651	esf1	87	66.667	Xiphophorus_maculatus