EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006854 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: splicing factor 3A subunit 3-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1506 bases
Position: chrJH651548.1:2898313-2899818
Accession: 101586089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009173	SF3a60_bindingd	PF12108.8	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009309	-	1482	XM_012514496	ENSODEP00000009173	493 (aa)	XP_012369950	-

Gene Model

Click here to download ENSODEG00000006854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006854	-	100	86.613	ENSODEG00000018393	-	100	86.613
ENSODEG00000006854	-	100	91.617	ENSODEG00000007470	-	100	91.617
ENSODEG00000006854	-	100	84.064	ENSODEG00000000937	-	100	81.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006854	-	100	96.407	ENSG00000183431	SF3A3	100	96.407	Homo_sapiens
ENSODEG00000006854	-	100	88.623	ENSAPOG00000015608	sf3a3	100	86.028	Acanthochromis_polyacanthus
ENSODEG00000006854	-	100	96.407	ENSAMEG00000001262	SF3A3	100	96.407	Ailuropoda_melanoleuca
ENSODEG00000006854	-	95	82.446	ENSACIG00000009061	sf3a3	99	80.276	Amphilophus_citrinellus
ENSODEG00000006854	-	100	89.222	ENSAOCG00000013954	sf3a3	100	86.627	Amphiprion_ocellaris
ENSODEG00000006854	-	100	89.222	ENSAPEG00000007297	sf3a3	100	86.627	Amphiprion_percula
ENSODEG00000006854	-	100	88.423	ENSATEG00000008754	sf3a3	100	85.828	Anabas_testudineus
ENSODEG00000006854	-	94	93.817	ENSAPLG00000014900	SF3A3	100	90.618	Anas_platyrhynchos
ENSODEG00000006854	-	100	92.814	ENSACAG00000017058	SF3A3	100	89.820	Anolis_carolinensis
ENSODEG00000006854	-	100	73.225	ENSANAG00000036903	-	100	76.268	Aotus_nancymaae
ENSODEG00000006854	-	99	92.169	ENSANAG00000014878	SF3A3	100	89.157	Aotus_nancymaae
ENSODEG00000006854	-	100	89.022	ENSACLG00000017977	sf3a3	100	86.427	Astatotilapia_calliptera
ENSODEG00000006854	-	100	88.423	ENSAMXG00000016855	sf3a3	87	88.423	Astyanax_mexicanus
ENSODEG00000006854	-	100	96.208	ENSBTAG00000007299	SF3A3	100	96.208	Bos_taurus
ENSODEG00000006854	-	100	50.099	WBGene00011758	T13H5.4	100	49.702	Caenorhabditis_elegans
ENSODEG00000006854	-	100	96.407	ENSCJAG00000002176	SF3A3	100	96.407	Callithrix_jacchus
ENSODEG00000006854	-	100	96.407	ENSCAFG00000003222	-	100	96.407	Canis_familiaris
ENSODEG00000006854	-	100	96.407	ENSCAFG00000000683	-	100	96.407	Canis_familiaris
ENSODEG00000006854	-	100	96.407	ENSCAFG00020006186	SF3A3	100	96.407	Canis_lupus_dingo
ENSODEG00000006854	-	100	96.208	ENSCHIG00000020638	SF3A3	100	96.208	Capra_hircus
ENSODEG00000006854	-	100	90.419	ENSTSYG00000008417	SF3A3	100	90.419	Carlito_syrichta
ENSODEG00000006854	-	85	62.471	ENSCAPG00000003466	SF3A3	100	62.238	Cavia_aperea
ENSODEG00000006854	-	100	96.607	ENSCPOG00000008660	SF3A3	100	96.607	Cavia_porcellus
ENSODEG00000006854	-	100	71.515	ENSCCAG00000034048	-	100	69.293	Cebus_capucinus
ENSODEG00000006854	-	100	96.407	ENSCCAG00000033732	SF3A3	100	96.407	Cebus_capucinus
ENSODEG00000006854	-	94	79.701	ENSCATG00000041660	-	100	77.564	Cercocebus_atys
ENSODEG00000006854	-	100	71.805	ENSCATG00000043537	-	100	71.805	Cercocebus_atys
ENSODEG00000006854	-	100	96.407	ENSCATG00000043496	SF3A3	100	96.407	Cercocebus_atys
ENSODEG00000006854	-	100	96.407	ENSCLAG00000010838	SF3A3	100	96.407	Chinchilla_lanigera
ENSODEG00000006854	-	95	96.218	ENSCSAG00000001120	SF3A3	100	96.218	Chlorocebus_sabaeus
ENSODEG00000006854	-	80	84.043	ENSCHOG00000006849	SF3A3	80	84.043	Choloepus_hoffmanni
ENSODEG00000006854	-	100	85.429	ENSCPBG00000018291	-	100	82.834	Chrysemys_picta_bellii
ENSODEG00000006854	-	63	74.359	ENSCPBG00000007472	-	79	74.359	Chrysemys_picta_bellii
ENSODEG00000006854	-	100	66.335	ENSCING00000002730	-	100	64.143	Ciona_intestinalis
ENSODEG00000006854	-	100	66.467	ENSCSAVG00000005063	-	100	64.072	Ciona_savignyi
ENSODEG00000006854	-	100	96.407	ENSCANG00000042083	SF3A3	100	96.407	Colobus_angolensis_palliatus
ENSODEG00000006854	-	100	70.791	ENSCANG00000035535	-	100	70.791	Colobus_angolensis_palliatus
ENSODEG00000006854	-	100	96.407	ENSCGRG00001011320	Sf3a3	100	96.407	Cricetulus_griseus_chok1gshd
ENSODEG00000006854	-	100	96.407	ENSCGRG00000012156	Sf3a3	100	96.407	Cricetulus_griseus_crigri
ENSODEG00000006854	-	100	87.026	ENSCSEG00000010401	sf3a3	100	84.431	Cynoglossus_semilaevis
ENSODEG00000006854	-	94	86.141	ENSCVAG00000010239	sf3a3	95	83.795	Cyprinodon_variegatus
ENSODEG00000006854	-	100	88.224	ENSDARG00000100114	sf3a3	100	88.305	Danio_rerio
ENSODEG00000006854	-	91	96.280	ENSDNOG00000046628	SF3A3	99	96.280	Dasypus_novemcinctus
ENSODEG00000006854	-	100	96.407	ENSDORG00000008798	Sf3a3	100	96.407	Dipodomys_ordii
ENSODEG00000006854	-	100	63.043	FBgn0014366	noi	100	62.648	Drosophila_melanogaster
ENSODEG00000006854	-	100	78.728	ENSEBUG00000015411	sf3a3	92	78.330	Eptatretus_burgeri
ENSODEG00000006854	-	100	96.407	ENSEASG00005012906	SF3A3	100	96.407	Equus_asinus_asinus
ENSODEG00000006854	-	100	96.407	ENSECAG00000017333	SF3A3	100	96.407	Equus_caballus
ENSODEG00000006854	-	100	86.427	ENSELUG00000010024	sf3a3	100	83.832	Esox_lucius
ENSODEG00000006854	-	100	96.407	ENSFCAG00000027772	SF3A3	100	96.407	Felis_catus
ENSODEG00000006854	-	100	93.812	ENSFALG00000001003	SF3A3	100	90.818	Ficedula_albicollis
ENSODEG00000006854	-	100	96.607	ENSFDAG00000020908	SF3A3	100	96.607	Fukomys_damarensis
ENSODEG00000006854	-	100	87.026	ENSFHEG00000019107	sf3a3	100	84.431	Fundulus_heteroclitus
ENSODEG00000006854	-	100	85.828	ENSGMOG00000015540	sf3a3	100	83.433	Gadus_morhua
ENSODEG00000006854	-	100	93.812	ENSGALG00000001540	SF3A3	100	90.818	Gallus_gallus
ENSODEG00000006854	-	100	87.625	ENSGAFG00000002320	sf3a3	100	85.030	Gambusia_affinis
ENSODEG00000006854	-	100	88.423	ENSGACG00000007842	sf3a3	100	85.828	Gasterosteus_aculeatus
ENSODEG00000006854	-	100	94.012	ENSGAGG00000014980	SF3A3	100	91.018	Gopherus_agassizii
ENSODEG00000006854	-	100	74.850	ENSGGOG00000022611	-	100	75.050	Gorilla_gorilla
ENSODEG00000006854	-	100	96.407	ENSGGOG00000013928	SF3A3	100	96.407	Gorilla_gorilla
ENSODEG00000006854	-	100	89.022	ENSHBUG00000018158	sf3a3	100	86.427	Haplochromis_burtoni
ENSODEG00000006854	-	100	96.806	ENSHGLG00000012502	SF3A3	100	96.806	Heterocephalus_glaber_female
ENSODEG00000006854	-	100	96.806	ENSHGLG00100010546	SF3A3	100	96.806	Heterocephalus_glaber_male
ENSODEG00000006854	-	100	86.228	ENSHCOG00000015109	sf3a3	100	83.633	Hippocampus_comes
ENSODEG00000006854	-	100	87.625	ENSIPUG00000011603	sf3a3	100	85.230	Ictalurus_punctatus
ENSODEG00000006854	-	100	96.607	ENSSTOG00000001691	SF3A3	100	96.607	Ictidomys_tridecemlineatus
ENSODEG00000006854	-	100	96.407	ENSJJAG00000012404	Sf3a3	100	96.407	Jaculus_jaculus
ENSODEG00000006854	-	100	87.425	ENSKMAG00000007632	sf3a3	100	84.830	Kryptolebias_marmoratus
ENSODEG00000006854	-	100	80.279	ENSLBEG00000000816	sf3a3	100	78.088	Labrus_bergylta
ENSODEG00000006854	-	100	89.820	ENSLOCG00000003273	sf3a3	100	87.226	Lepisosteus_oculatus
ENSODEG00000006854	-	100	83.832	ENSLAFG00000008094	SF3A3	100	80.838	Loxodonta_africana
ENSODEG00000006854	-	100	96.407	ENSMFAG00000043047	SF3A3	100	96.407	Macaca_fascicularis
ENSODEG00000006854	-	94	79.274	ENSMFAG00000036706	-	100	76.923	Macaca_fascicularis
ENSODEG00000006854	-	100	76.846	ENSMMUG00000038820	-	100	74.651	Macaca_mulatta
ENSODEG00000006854	-	100	96.407	ENSMMUG00000023199	SF3A3	100	96.407	Macaca_mulatta
ENSODEG00000006854	-	100	96.407	ENSMNEG00000044291	SF3A3	100	96.407	Macaca_nemestrina
ENSODEG00000006854	-	94	76.496	ENSMNEG00000028686	-	100	74.145	Macaca_nemestrina
ENSODEG00000006854	-	100	71.197	ENSMLEG00000028631	-	100	71.429	Mandrillus_leucophaeus
ENSODEG00000006854	-	100	81.000	ENSMLEG00000036714	-	100	79.000	Mandrillus_leucophaeus
ENSODEG00000006854	-	100	96.407	ENSMLEG00000030641	SF3A3	100	96.407	Mandrillus_leucophaeus
ENSODEG00000006854	-	100	88.623	ENSMAMG00000001942	sf3a3	100	86.028	Mastacembelus_armatus
ENSODEG00000006854	-	100	89.022	ENSMZEG00005016987	sf3a3	100	86.427	Maylandia_zebra
ENSODEG00000006854	-	100	88.867	ENSMGAG00000002875	SF3A3	100	85.885	Meleagris_gallopavo
ENSODEG00000006854	-	100	91.816	ENSMICG00000001485	-	100	88.822	Microcebus_murinus
ENSODEG00000006854	-	100	89.655	ENSMICG00000043548	-	100	91.481	Microcebus_murinus
ENSODEG00000006854	-	91	93.668	ENSMICG00000026541	-	100	90.611	Microcebus_murinus
ENSODEG00000006854	-	95	88.960	ENSMOCG00000014565	-	97	88.960	Microtus_ochrogaster
ENSODEG00000006854	-	100	92.615	ENSMOCG00000019939	-	100	92.615	Microtus_ochrogaster
ENSODEG00000006854	-	100	88.822	ENSMMOG00000014307	sf3a3	100	86.228	Mola_mola
ENSODEG00000006854	-	100	88.623	ENSMODG00000024045	-	100	86.427	Monodelphis_domestica
ENSODEG00000006854	-	100	77.476	ENSMODG00000017729	-	100	76.686	Monodelphis_domestica
ENSODEG00000006854	-	100	88.224	ENSMALG00000004836	sf3a3	100	85.746	Monopterus_albus
ENSODEG00000006854	-	100	96.407	MGP_CAROLIEiJ_G0026449	Sf3a3	100	96.407	Mus_caroli
ENSODEG00000006854	-	100	96.407	ENSMUSG00000028902	Sf3a3	100	96.407	Mus_musculus
ENSODEG00000006854	-	100	90.619	MGP_PahariEiJ_G0028780	Sf3a3	100	87.625	Mus_pahari
ENSODEG00000006854	-	100	96.407	MGP_SPRETEiJ_G0027428	Sf3a3	100	96.407	Mus_spretus
ENSODEG00000006854	-	100	96.008	ENSMLUG00000000991	SF3A3	100	96.008	Myotis_lucifugus
ENSODEG00000006854	-	100	90.220	ENSNGAG00000018032	Sf3a3	100	87.226	Nannospalax_galili
ENSODEG00000006854	-	100	87.425	ENSNLEG00000011720	SF3A3	100	87.425	Nomascus_leucogenys
ENSODEG00000006854	-	100	96.806	ENSOPRG00000012785	SF3A3	100	96.806	Ochotona_princeps
ENSODEG00000006854	-	87	89.655	ENSONIG00000010296	sf3a3	100	86.667	Oreochromis_niloticus
ENSODEG00000006854	-	94	94.883	ENSOANG00000002473	SF3A3	100	94.883	Ornithorhynchus_anatinus
ENSODEG00000006854	-	100	96.806	ENSOCUG00000005407	SF3A3	100	96.806	Oryctolagus_cuniculus
ENSODEG00000006854	-	100	87.425	ENSORLG00000008175	sf3a3	100	84.830	Oryzias_latipes
ENSODEG00000006854	-	100	87.226	ENSORLG00020013708	sf3a3	100	84.631	Oryzias_latipes_hni
ENSODEG00000006854	-	100	87.226	ENSORLG00015004104	sf3a3	100	84.631	Oryzias_latipes_hsok
ENSODEG00000006854	-	100	87.425	ENSOMEG00000020177	sf3a3	100	84.830	Oryzias_melastigma
ENSODEG00000006854	-	100	96.208	ENSOARG00000019950	SF3A3	100	96.208	Ovis_aries
ENSODEG00000006854	-	100	96.407	ENSPPAG00000034066	SF3A3	100	96.407	Pan_paniscus
ENSODEG00000006854	-	100	74.850	ENSPPAG00000039955	-	100	75.050	Pan_paniscus
ENSODEG00000006854	-	100	96.407	ENSPPRG00000001258	SF3A3	100	96.407	Panthera_pardus
ENSODEG00000006854	-	100	96.407	ENSPTIG00000007515	SF3A3	100	96.407	Panthera_tigris_altaica
ENSODEG00000006854	-	100	75.250	ENSPTRG00000046013	-	100	75.654	Pan_troglodytes
ENSODEG00000006854	-	100	96.407	ENSPTRG00000000559	SF3A3	100	96.407	Pan_troglodytes
ENSODEG00000006854	-	100	84.200	ENSPANG00000029393	-	100	81.800	Papio_anubis
ENSODEG00000006854	-	100	71.197	ENSPANG00000031214	-	100	70.588	Papio_anubis
ENSODEG00000006854	-	100	96.407	ENSPANG00000021859	SF3A3	100	96.407	Papio_anubis
ENSODEG00000006854	-	100	89.421	ENSPKIG00000004719	sf3a3	100	86.826	Paramormyrops_kingsleyae
ENSODEG00000006854	-	100	91.451	ENSPSIG00000004273	SF3A3	100	88.867	Pelodiscus_sinensis
ENSODEG00000006854	-	91	87.090	ENSPMGG00000003610	sf3a3	94	84.464	Periophthalmus_magnuspinnatus
ENSODEG00000006854	-	100	96.407	ENSPEMG00000020805	Sf3a3	100	96.407	Peromyscus_maniculatus_bairdii
ENSODEG00000006854	-	55	78.889	ENSPMAG00000001044	sf3a3	98	78.889	Petromyzon_marinus
ENSODEG00000006854	-	100	95.609	ENSPCIG00000025719	SF3A3	100	95.609	Phascolarctos_cinereus
ENSODEG00000006854	-	100	87.824	ENSPFOG00000005284	sf3a3	100	85.230	Poecilia_formosa
ENSODEG00000006854	-	99	84.105	ENSPLAG00000003979	sf3a3	92	81.891	Poecilia_latipinna
ENSODEG00000006854	-	78	82.188	ENSPMEG00000021132	sf3a3	88	78.880	Poecilia_mexicana
ENSODEG00000006854	-	100	87.425	ENSPREG00000013802	sf3a3	100	84.830	Poecilia_reticulata
ENSODEG00000006854	-	100	93.413	ENSPPYG00000001519	SF3A3	100	90.419	Pongo_abelii
ENSODEG00000006854	-	100	89.820	ENSPCAG00000010734	SF3A3	100	86.826	Procavia_capensis
ENSODEG00000006854	-	100	84.722	ENSPCOG00000020389	-	100	84.722	Propithecus_coquereli
ENSODEG00000006854	-	100	79.641	ENSPCOG00000017131	-	100	76.447	Propithecus_coquereli
ENSODEG00000006854	-	100	83.633	ENSPVAG00000010158	SF3A3	100	83.633	Pteropus_vampyrus
ENSODEG00000006854	-	100	89.022	ENSPNYG00000000786	sf3a3	100	86.427	Pundamilia_nyererei
ENSODEG00000006854	-	100	88.423	ENSPNAG00000010298	sf3a3	100	86.028	Pygocentrus_nattereri
ENSODEG00000006854	-	100	96.407	ENSRNOG00000007629	Sf3a3	100	96.407	Rattus_norvegicus
ENSODEG00000006854	-	100	71.200	ENSRBIG00000041123	-	100	68.600	Rhinopithecus_bieti
ENSODEG00000006854	-	100	69.461	ENSRBIG00000043833	-	100	66.866	Rhinopithecus_bieti
ENSODEG00000006854	-	100	96.407	ENSRBIG00000043567	SF3A3	100	96.407	Rhinopithecus_bieti
ENSODEG00000006854	-	100	96.407	ENSRROG00000033888	SF3A3	100	96.407	Rhinopithecus_roxellana
ENSODEG00000006854	-	94	77.778	ENSRROG00000032346	-	100	75.000	Rhinopithecus_roxellana
ENSODEG00000006854	-	94	88.539	ENSSBOG00000032688	SF3A3	100	98.020	Saimiri_boliviensis_boliviensis
ENSODEG00000006854	-	100	73.022	ENSSBOG00000026932	-	100	71.197	Saimiri_boliviensis_boliviensis
ENSODEG00000006854	-	90	95.585	ENSSHAG00000014530	SF3A3	100	95.585	Sarcophilus_harrisii
ENSODEG00000006854	-	100	89.222	ENSSFOG00015005975	sf3a3	100	86.627	Scleropages_formosus
ENSODEG00000006854	-	100	88.224	ENSSMAG00000020213	sf3a3	100	85.629	Scophthalmus_maximus
ENSODEG00000006854	-	100	85.828	ENSSDUG00000011590	sf3a3	100	83.234	Seriola_dumerili
ENSODEG00000006854	-	100	89.022	ENSSLDG00000020635	sf3a3	100	86.427	Seriola_lalandi_dorsalis
ENSODEG00000006854	-	100	93.214	ENSSPUG00000004010	SF3A3	100	90.220	Sphenodon_punctatus
ENSODEG00000006854	-	100	88.623	ENSSPAG00000018653	sf3a3	100	86.028	Stegastes_partitus
ENSODEG00000006854	-	100	96.407	ENSSSCG00000003643	SF3A3	100	96.407	Sus_scrofa
ENSODEG00000006854	-	87	93.563	ENSTGUG00000001466	SF3A3	100	89.908	Taeniopygia_guttata
ENSODEG00000006854	-	100	87.226	ENSTRUG00000009089	sf3a3	100	84.631	Takifugu_rubripes
ENSODEG00000006854	-	100	86.481	ENSTNIG00000009800	sf3a3	100	83.897	Tetraodon_nigroviridis
ENSODEG00000006854	-	100	84.032	ENSTBEG00000007614	SF3A3	100	81.038	Tupaia_belangeri
ENSODEG00000006854	-	100	96.208	ENSTTRG00000013519	SF3A3	100	96.208	Tursiops_truncatus
ENSODEG00000006854	-	100	96.407	ENSUAMG00000006134	SF3A3	100	96.407	Ursus_americanus
ENSODEG00000006854	-	100	96.407	ENSUMAG00000021250	SF3A3	100	96.407	Ursus_maritimus
ENSODEG00000006854	-	67	98.258	ENSVPAG00000004778	SF3A3	73	98.258	Vicugna_pacos
ENSODEG00000006854	-	100	92.615	ENSVVUG00000022908	SF3A3	100	89.621	Vulpes_vulpes
ENSODEG00000006854	-	100	90.020	ENSXETG00000022923	sf3a3	100	87.425	Xenopus_tropicalis
ENSODEG00000006854	-	100	87.625	ENSXMAG00000017165	sf3a3	100	85.030	Xiphophorus_maculatus