EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006904 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 35515 bases
Position: chrJH651626.1:5969082-6004596
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009228	zf-CCHC	PF00098.23	2.6e-11	1	3
ENSODEP00000009228	zf-CCHC	PF00098.23	2.6e-11	2	3
ENSODEP00000009228	zf-CCHC	PF00098.23	2.6e-11	3	3
ENSODEP00000009229	zf-CCHC	PF00098.23	5.4e-09	1	2
ENSODEP00000009229	zf-CCHC	PF00098.23	5.4e-09	2	2
ENSODEP00000009229	PAP_assoc	PF03828.19	1.7e-15	1	1
ENSODEP00000009228	PAP_assoc	PF03828.19	4.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009366	-	2265	-	ENSODEP00000009228	754 (aa)	-	-
ENSODET00000009367	-	1191	-	ENSODEP00000009229	396 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006904	-	81	67.933	ENSODEG00000007328	TUT4	61	58.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006904	-	99	91.071	ENSG00000083223	TUT7	99	91.071	Homo_sapiens
ENSODEG00000006904	-	92	54.975	ENSAPOG00000012979	TUT7	81	56.143	Acanthochromis_polyacanthus
ENSODEG00000006904	-	99	84.884	ENSAMEG00000004148	TUT7	73	83.034	Ailuropoda_melanoleuca
ENSODEG00000006904	-	56	54.545	ENSAOCG00000004223	-	68	51.203	Amphiprion_ocellaris
ENSODEG00000006904	-	92	56.131	ENSAPEG00000014922	-	93	56.131	Amphiprion_percula
ENSODEG00000006904	-	99	71.860	ENSAPLG00000015510	TUT7	74	69.482	Anas_platyrhynchos
ENSODEG00000006904	-	67	69.804	ENSACAG00000000279	TUT7	85	70.980	Anolis_carolinensis
ENSODEG00000006904	-	99	91.837	ENSANAG00000025848	TUT7	99	91.837	Aotus_nancymaae
ENSODEG00000006904	-	94	54.612	ENSACLG00000018198	TUT7	89	55.177	Astatotilapia_calliptera
ENSODEG00000006904	-	99	83.256	ENSBTAG00000001737	TUT7	81	77.877	Bos_taurus
ENSODEG00000006904	-	99	91.837	ENSCJAG00000001845	TUT7	99	91.837	Callithrix_jacchus
ENSODEG00000006904	-	99	84.186	ENSCAFG00000001331	TUT7	74	82.603	Canis_familiaris
ENSODEG00000006904	-	99	87.755	ENSCAFG00020023620	TUT7	99	87.755	Canis_lupus_dingo
ENSODEG00000006904	-	99	83.488	ENSCHIG00000017690	TUT7	81	78.645	Capra_hircus
ENSODEG00000006904	-	99	91.071	ENSTSYG00000008907	TUT7	99	91.071	Carlito_syrichta
ENSODEG00000006904	-	99	82.976	ENSCPOG00000002500	TUT7	77	82.976	Cavia_porcellus
ENSODEG00000006904	-	99	91.327	ENSCATG00000032888	TUT7	99	91.327	Cercocebus_atys
ENSODEG00000006904	-	99	92.123	ENSCLAG00000007535	TUT7	76	92.390	Chinchilla_lanigera
ENSODEG00000006904	-	99	83.256	ENSCSAG00000007408	TUT7	79	82.267	Chlorocebus_sabaeus
ENSODEG00000006904	-	99	73.333	ENSCHOG00000011129	TUT7	76	73.595	Choloepus_hoffmanni
ENSODEG00000006904	-	99	65.828	ENSCPBG00000005272	TUT7	78	67.053	Chrysemys_picta_bellii
ENSODEG00000006904	-	99	91.071	ENSCANG00000035790	TUT7	99	91.071	Colobus_angolensis_palliatus
ENSODEG00000006904	-	92	82.134	ENSCGRG00001020605	-	72	78.094	Cricetulus_griseus_chok1gshd
ENSODEG00000006904	-	97	74.893	ENSCGRG00000016585	-	73	72.977	Cricetulus_griseus_crigri
ENSODEG00000006904	-	92	54.726	ENSCSEG00000007068	TUT7	85	54.962	Cynoglossus_semilaevis
ENSODEG00000006904	-	92	51.970	ENSCVAG00000012526	-	72	60.037	Cyprinodon_variegatus
ENSODEG00000006904	-	51	62.189	ENSDARG00000074645	CABZ01032476.1	78	49.833	Danio_rerio
ENSODEG00000006904	-	94	81.418	ENSDNOG00000010663	TUT7	72	86.278	Dasypus_novemcinctus
ENSODEG00000006904	-	96	91.579	ENSDORG00000009046	-	97	91.579	Dipodomys_ordii
ENSODEG00000006904	-	86	82.630	ENSETEG00000007739	TUT7	64	82.630	Echinops_telfairi
ENSODEG00000006904	-	99	82.558	ENSEASG00005020165	TUT7	77	79.236	Equus_asinus_asinus
ENSODEG00000006904	-	99	82.558	ENSECAG00000014831	TUT7	77	78.824	Equus_caballus
ENSODEG00000006904	-	94	67.083	ENSEEUG00000012794	TUT7	70	67.500	Erinaceus_europaeus
ENSODEG00000006904	-	89	61.600	ENSELUG00000013049	-	90	69.369	Esox_lucius
ENSODEG00000006904	-	99	90.816	ENSFCAG00000003491	TUT7	99	90.816	Felis_catus
ENSODEG00000006904	-	99	71.163	ENSFALG00000003541	TUT7	79	67.659	Ficedula_albicollis
ENSODEG00000006904	-	99	81.628	ENSFDAG00000002315	TUT7	77	81.628	Fukomys_damarensis
ENSODEG00000006904	-	96	52.153	ENSFHEG00000004770	-	72	61.302	Fundulus_heteroclitus
ENSODEG00000006904	-	64	68.493	ENSGMOG00000001464	-	68	72.834	Gadus_morhua
ENSODEG00000006904	-	94	70.905	ENSGALG00000012607	ZCCHC6	78	63.928	Gallus_gallus
ENSODEG00000006904	-	51	60.000	ENSGAFG00000017141	-	66	45.545	Gambusia_affinis
ENSODEG00000006904	-	83	59.091	ENSGAFG00000017138	-	95	58.182	Gambusia_affinis
ENSODEG00000006904	-	68	65.784	ENSGACG00000004735	TUT7	84	65.524	Gasterosteus_aculeatus
ENSODEG00000006904	-	99	65.581	ENSGAGG00000013087	TUT7	72	68.511	Gopherus_agassizii
ENSODEG00000006904	-	99	91.327	ENSGGOG00000007523	ZCCHC6	99	91.327	Gorilla_gorilla
ENSODEG00000006904	-	92	56.676	ENSHBUG00000011514	-	99	56.403	Haplochromis_burtoni
ENSODEG00000006904	-	98	82.677	ENSHGLG00000018427	TUT7	78	83.957	Heterocephalus_glaber_female
ENSODEG00000006904	-	98	82.546	ENSHGLG00100004701	TUT7	78	83.824	Heterocephalus_glaber_male
ENSODEG00000006904	-	94	59.030	ENSHCOG00000006100	-	100	57.412	Hippocampus_comes
ENSODEG00000006904	-	97	80.446	ENSSTOG00000000586	TUT7	77	80.577	Ictidomys_tridecemlineatus
ENSODEG00000006904	-	97	90.390	ENSJJAG00000000106	-	99	90.390	Jaculus_jaculus
ENSODEG00000006904	-	93	61.725	ENSKMAG00000005782	-	98	60.541	Kryptolebias_marmoratus
ENSODEG00000006904	-	94	64.010	ENSLACG00000001637	TUT7	72	62.356	Latimeria_chalumnae
ENSODEG00000006904	-	91	60.494	ENSLOCG00000002472	TUT7	66	65.090	Lepisosteus_oculatus
ENSODEG00000006904	-	97	76.070	ENSLAFG00000007884	TUT7	90	75.936	Loxodonta_africana
ENSODEG00000006904	-	99	91.071	ENSMFAG00000000971	TUT7	99	91.071	Macaca_fascicularis
ENSODEG00000006904	-	99	91.327	ENSMMUG00000003401	TUT7	99	91.327	Macaca_mulatta
ENSODEG00000006904	-	99	91.327	ENSMNEG00000031427	TUT7	99	91.327	Macaca_nemestrina
ENSODEG00000006904	-	99	91.327	ENSMLEG00000027049	TUT7	99	91.327	Mandrillus_leucophaeus
ENSODEG00000006904	-	92	59.504	ENSMAMG00000011815	TUT7	95	59.504	Mastacembelus_armatus
ENSODEG00000006904	-	92	54.591	ENSMZEG00005012809	TUT7	89	55.172	Maylandia_zebra
ENSODEG00000006904	-	96	58.491	ENSMGAG00000006542	TUT7	79	58.356	Meleagris_gallopavo
ENSODEG00000006904	-	97	83.924	ENSMAUG00000006963	-	72	79.416	Mesocricetus_auratus
ENSODEG00000006904	-	92	92.603	ENSMICG00000016944	TUT7	100	92.603	Microcebus_murinus
ENSODEG00000006904	-	99	91.371	ENSMOCG00000007812	-	99	91.371	Microtus_ochrogaster
ENSODEG00000006904	-	94	71.469	ENSMODG00000003542	TUT7	72	72.521	Monodelphis_domestica
ENSODEG00000006904	-	89	59.040	ENSMALG00000000634	TUT7	90	58.757	Monopterus_albus
ENSODEG00000006904	-	97	75.966	MGP_CAROLIEiJ_G0018612	-	74	75.553	Mus_caroli
ENSODEG00000006904	-	97	83.452	ENSMUSG00000035248	Tut7	87	79.526	Mus_musculus
ENSODEG00000006904	-	92	82.134	MGP_PahariEiJ_G0019676	-	72	80.145	Mus_pahari
ENSODEG00000006904	-	92	83.375	MGP_SPRETEiJ_G0019491	-	83	75.263	Mus_spretus
ENSODEG00000006904	-	99	76.101	ENSMPUG00000002191	TUT7	74	77.735	Mustela_putorius_furo
ENSODEG00000006904	-	99	80.930	ENSMLUG00000001298	TUT7	76	78.732	Myotis_lucifugus
ENSODEG00000006904	-	98	91.731	ENSNGAG00000022758	-	99	91.731	Nannospalax_galili
ENSODEG00000006904	-	92	53.367	ENSNBRG00000021961	TUT7	89	54.559	Neolamprologus_brichardi
ENSODEG00000006904	-	99	90.816	ENSNLEG00000005138	TUT7	99	90.816	Nomascus_leucogenys
ENSODEG00000006904	-	93	60.623	ENSMEUG00000006540	TUT7	55	60.765	Notamacropus_eugenii
ENSODEG00000006904	-	97	75.236	ENSOPRG00000002893	TUT7	58	72.833	Ochotona_princeps
ENSODEG00000006904	-	71	62.577	ENSONIG00000017001	TUT7	82	63.704	Oreochromis_niloticus
ENSODEG00000006904	-	97	83.688	ENSOCUG00000010949	TUT7	73	77.538	Oryctolagus_cuniculus
ENSODEG00000006904	-	89	48.718	ENSORLG00000001714	-	97	48.011	Oryzias_latipes
ENSODEG00000006904	-	92	45.522	ENSORLG00020007882	-	61	63.265	Oryzias_latipes_hni
ENSODEG00000006904	-	92	45.722	ENSORLG00015017233	-	58	58.685	Oryzias_latipes_hsok
ENSODEG00000006904	-	90	57.423	ENSOMEG00000015528	-	83	57.703	Oryzias_melastigma
ENSODEG00000006904	-	99	84.419	ENSOGAG00000015630	TUT7	77	80.566	Otolemur_garnettii
ENSODEG00000006904	-	99	75.472	ENSOARG00000008732	TUT7	81	74.186	Ovis_aries
ENSODEG00000006904	-	99	91.327	ENSPPAG00000038548	TUT7	99	91.327	Pan_paniscus
ENSODEG00000006904	-	99	90.816	ENSPPRG00000011084	TUT7	99	90.816	Panthera_pardus
ENSODEG00000006904	-	99	90.816	ENSPTIG00000007881	TUT7	99	90.816	Panthera_tigris_altaica
ENSODEG00000006904	-	99	91.327	ENSPTRG00000021076	TUT7	99	91.327	Pan_troglodytes
ENSODEG00000006904	-	99	91.327	ENSPANG00000024890	TUT7	99	91.327	Papio_anubis
ENSODEG00000006904	-	97	57.746	ENSPKIG00000022326	TUT7	64	59.938	Paramormyrops_kingsleyae
ENSODEG00000006904	-	99	65.199	ENSPSIG00000003600	TUT7	75	66.158	Pelodiscus_sinensis
ENSODEG00000006904	-	94	58.556	ENSPMGG00000012649	-	96	57.487	Periophthalmus_magnuspinnatus
ENSODEG00000006904	-	97	84.397	ENSPEMG00000014030	-	77	76.394	Peromyscus_maniculatus_bairdii
ENSODEG00000006904	-	99	74.478	ENSPCIG00000018302	TUT7	76	73.620	Phascolarctos_cinereus
ENSODEG00000006904	-	66	67.110	ENSPFOG00000011606	-	83	64.972	Poecilia_formosa
ENSODEG00000006904	-	88	61.714	ENSPLAG00000006121	TUT7	96	60.857	Poecilia_latipinna
ENSODEG00000006904	-	88	61.714	ENSPMEG00000015937	-	96	60.857	Poecilia_mexicana
ENSODEG00000006904	-	93	54.369	ENSPREG00000009118	TUT7	87	57.075	Poecilia_reticulata
ENSODEG00000006904	-	99	83.023	ENSPPYG00000019340	TUT7	80	80.645	Pongo_abelii
ENSODEG00000006904	-	92	80.645	ENSPCAG00000011630	TUT7	50	85.773	Procavia_capensis
ENSODEG00000006904	-	99	91.582	ENSPCOG00000023407	TUT7	99	91.582	Propithecus_coquereli
ENSODEG00000006904	-	99	83.023	ENSPVAG00000004589	TUT7	61	81.157	Pteropus_vampyrus
ENSODEG00000006904	-	92	54.342	ENSPNYG00000004149	TUT7	89	55.316	Pundamilia_nyererei
ENSODEG00000006904	-	92	82.134	ENSRNOG00000016629	Tut7	73	79.661	Rattus_norvegicus
ENSODEG00000006904	-	99	91.327	ENSRBIG00000016827	TUT7	99	91.327	Rhinopithecus_bieti
ENSODEG00000006904	-	99	91.327	ENSRROG00000034432	TUT7	99	91.327	Rhinopithecus_roxellana
ENSODEG00000006904	-	94	72.927	ENSSHAG00000008290	TUT7	72	73.907	Sarcophilus_harrisii
ENSODEG00000006904	-	97	54.202	ENSSFOG00015009813	zcchc6	70	55.525	Scleropages_formosus
ENSODEG00000006904	-	87	61.671	ENSSMAG00000010045	-	91	59.654	Scophthalmus_maximus
ENSODEG00000006904	-	91	60.773	ENSSDUG00000012876	TUT7	95	60.221	Seriola_dumerili
ENSODEG00000006904	-	91	60.221	ENSSLDG00000019107	-	89	59.392	Seriola_lalandi_dorsalis
ENSODEG00000006904	-	74	76.429	ENSSARG00000009763	TUT7	64	76.523	Sorex_araneus
ENSODEG00000006904	-	94	73.105	ENSSPUG00000004029	TUT7	72	71.027	Sphenodon_punctatus
ENSODEG00000006904	-	93	58.266	ENSSPAG00000018387	-	91	58.537	Stegastes_partitus
ENSODEG00000006904	-	99	83.953	ENSSSCG00000010952	TUT7	73	82.944	Sus_scrofa
ENSODEG00000006904	-	99	71.329	ENSTGUG00000000624	TUT7	76	72.029	Taeniopygia_guttata
ENSODEG00000006904	-	92	59.290	ENSTRUG00000023807	-	92	59.016	Takifugu_rubripes
ENSODEG00000006904	-	69	63.776	ENSTNIG00000015951	TUT7	80	64.567	Tetraodon_nigroviridis
ENSODEG00000006904	-	95	74.863	ENSTBEG00000010446	TUT7	76	74.863	Tupaia_belangeri
ENSODEG00000006904	-	99	84.186	ENSTTRG00000004236	TUT7	57	83.311	Tursiops_truncatus
ENSODEG00000006904	-	99	92.602	ENSUAMG00000027094	-	99	92.602	Ursus_americanus
ENSODEG00000006904	-	95	84.058	ENSUMAG00000004929	TUT7	72	83.193	Ursus_maritimus
ENSODEG00000006904	-	99	73.752	ENSVPAG00000001946	TUT7	74	74.008	Vicugna_pacos
ENSODEG00000006904	-	99	83.953	ENSVVUG00000022427	TUT7	73	83.034	Vulpes_vulpes
ENSODEG00000006904	-	99	66.279	ENSXETG00000017552	tut7	67	66.765	Xenopus_tropicalis
ENSODEG00000006904	-	92	55.721	ENSXCOG00000009445	-	76	57.837	Xiphophorus_couchianus
ENSODEG00000006904	-	88	61.714	ENSXMAG00000028804	-	96	60.571	Xiphophorus_maculatus