EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000006939 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 884 bases
Position: chrJH651544.1:321439-322322
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009279	Brix	PF04427.18	4.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009417	-	771	-	ENSODEP00000009279	256 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000006939	-	100	68.214	ENSODEG00000002442	-	96	68.214
ENSODEG00000006939	-	100	74.576	ENSODEG00000019144	-	96	74.576
ENSODEG00000006939	-	100	70.036	ENSODEG00000006584	-	96	70.036
ENSODEG00000006939	-	99	74.231	ENSODEG00000003531	-	99	74.231
ENSODEG00000006939	-	96	82.520	ENSODEG00000013529	-	93	82.520

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006939	-	100	73.220	ENSG00000197498	RPF2	97	78.261	Homo_sapiens
ENSODEG00000006939	-	99	63.281	ENSAPOG00000005714	rpf2	89	62.774	Acanthochromis_polyacanthus
ENSODEG00000006939	-	100	72.542	ENSAMEG00000015753	RPF2	96	72.542	Ailuropoda_melanoleuca
ENSODEG00000006939	-	52	65.672	ENSACIG00000006659	rpf2	80	65.672	Amphilophus_citrinellus
ENSODEG00000006939	-	99	62.409	ENSAOCG00000005173	rpf2	86	63.258	Amphiprion_ocellaris
ENSODEG00000006939	-	99	63.100	ENSAPEG00000004003	rpf2	89	63.100	Amphiprion_percula
ENSODEG00000006939	-	96	63.636	ENSATEG00000012818	rpf2	86	63.636	Anabas_testudineus
ENSODEG00000006939	-	95	70.611	ENSAPLG00000008812	RPF2	96	70.611	Anas_platyrhynchos
ENSODEG00000006939	-	96	68.182	ENSACAG00000011270	RPF2	85	68.182	Anolis_carolinensis
ENSODEG00000006939	-	99	64.211	ENSANAG00000033736	-	96	64.912	Aotus_nancymaae
ENSODEG00000006939	-	99	58.029	ENSANAG00000021067	-	87	56.569	Aotus_nancymaae
ENSODEG00000006939	-	95	73.967	ENSANAG00000025459	-	96	67.068	Aotus_nancymaae
ENSODEG00000006939	-	100	67.458	ENSANAG00000034834	-	96	67.458	Aotus_nancymaae
ENSODEG00000006939	-	100	76.140	ENSANAG00000026549	-	96	76.140	Aotus_nancymaae
ENSODEG00000006939	-	96	62.121	ENSAMXG00000035201	rpf2	86	62.121	Astyanax_mexicanus
ENSODEG00000006939	-	99	79.478	ENSBTAG00000016584	RPF2	86	81.008	Bos_taurus
ENSODEG00000006939	-	95	36.398	WBGene00021830	Y54E10A.10	88	36.398	Caenorhabditis_elegans
ENSODEG00000006939	-	100	74.007	ENSCJAG00000038330	RPF2	99	78.008	Callithrix_jacchus
ENSODEG00000006939	-	100	72.203	ENSCAFG00000003918	RPF2	96	72.203	Canis_familiaris
ENSODEG00000006939	-	99	80.303	ENSCHIG00000022499	RPF2	86	81.890	Capra_hircus
ENSODEG00000006939	-	99	75.547	ENSTSYG00000013924	RPF2	86	76.894	Carlito_syrichta
ENSODEG00000006939	-	100	65.591	ENSCAPG00000014257	RPF2	96	64.875	Cavia_aperea
ENSODEG00000006939	-	96	81.707	ENSCPOG00000006797	RPF2	93	81.707	Cavia_porcellus
ENSODEG00000006939	-	100	73.898	ENSCCAG00000030864	-	96	73.898	Cebus_capucinus
ENSODEG00000006939	-	100	71.864	ENSCCAG00000030365	-	96	71.864	Cebus_capucinus
ENSODEG00000006939	-	98	71.756	ENSCCAG00000028906	-	96	72.018	Cebus_capucinus
ENSODEG00000006939	-	88	58.197	ENSCCAG00000028553	-	87	57.565	Cebus_capucinus
ENSODEG00000006939	-	93	65.251	ENSCATG00000029725	-	95	65.251	Cercocebus_atys
ENSODEG00000006939	-	100	60.949	ENSCATG00000034352	-	78	74.384	Cercocebus_atys
ENSODEG00000006939	-	91	60.769	ENSCLAG00000013252	-	100	60.769	Chinchilla_lanigera
ENSODEG00000006939	-	99	64.548	ENSCLAG00000010874	-	99	63.211	Chinchilla_lanigera
ENSODEG00000006939	-	96	81.707	ENSCLAG00000010393	-	93	81.707	Chinchilla_lanigera
ENSODEG00000006939	-	96	77.652	ENSCHOG00000005865	RPF2	86	77.652	Choloepus_hoffmanni
ENSODEG00000006939	-	99	69.708	ENSCPBG00000006504	RPF2	86	70.833	Chrysemys_picta_bellii
ENSODEG00000006939	-	94	50.388	ENSCING00000008090	-	84	50.388	Ciona_intestinalis
ENSODEG00000006939	-	94	50.000	ENSCSAVG00000010672	-	87	50.000	Ciona_savignyi
ENSODEG00000006939	-	100	73.220	ENSCANG00000030665	RPF2	96	73.220	Colobus_angolensis_palliatus
ENSODEG00000006939	-	100	72.203	ENSCGRG00001007331	-	96	72.203	Cricetulus_griseus_chok1gshd
ENSODEG00000006939	-	96	63.258	ENSCGRG00001005262	-	83	63.258	Cricetulus_griseus_chok1gshd
ENSODEG00000006939	-	96	78.455	ENSCGRG00000006083	Rpf2	93	78.455	Cricetulus_griseus_crigri
ENSODEG00000006939	-	96	62.500	ENSCSEG00000015725	rpf2	88	62.500	Cynoglossus_semilaevis
ENSODEG00000006939	-	96	62.903	ENSCVAG00000001072	rpf2	87	62.121	Cyprinodon_variegatus
ENSODEG00000006939	-	96	61.742	ENSDARG00000043960	rpf2	86	61.742	Danio_rerio
ENSODEG00000006939	-	71	79.781	ENSDNOG00000039270	RPF2	88	80.220	Dasypus_novemcinctus
ENSODEG00000006939	-	56	80.645	ENSDORG00000026915	Rpf2	94	80.645	Dipodomys_ordii
ENSODEG00000006939	-	95	40.230	FBgn0038585	Non3	82	40.230	Drosophila_melanogaster
ENSODEG00000006939	-	96	45.627	ENSEBUG00000003640	rpf2	80	45.627	Eptatretus_burgeri
ENSODEG00000006939	-	52	76.119	ENSEASG00005002363	-	80	79.032	Equus_asinus_asinus
ENSODEG00000006939	-	99	78.229	ENSEASG00005006927	-	86	79.693	Equus_asinus_asinus
ENSODEG00000006939	-	99	78.229	ENSECAG00000017121	RPF2	86	79.693	Equus_caballus
ENSODEG00000006939	-	100	56.949	ENSEEUG00000006169	RPF2	99	56.949	Erinaceus_europaeus
ENSODEG00000006939	-	96	63.258	ENSELUG00000018518	rpf2	87	63.258	Esox_lucius
ENSODEG00000006939	-	100	72.203	ENSFCAG00000001527	RPF2	96	72.203	Felis_catus
ENSODEG00000006939	-	99	70.438	ENSFALG00000010816	RPF2	86	71.591	Ficedula_albicollis
ENSODEG00000006939	-	94	73.859	ENSFDAG00000016721	-	96	73.859	Fukomys_damarensis
ENSODEG00000006939	-	96	80.894	ENSFDAG00000005811	-	93	80.894	Fukomys_damarensis
ENSODEG00000006939	-	96	63.636	ENSFHEG00000011243	rpf2	86	63.636	Fundulus_heteroclitus
ENSODEG00000006939	-	96	54.167	ENSGMOG00000002521	rpf2	89	54.167	Gadus_morhua
ENSODEG00000006939	-	99	69.708	ENSGALG00000037087	RPF2	86	70.833	Gallus_gallus
ENSODEG00000006939	-	98	64.015	ENSGAFG00000009537	rpf2	88	64.015	Gambusia_affinis
ENSODEG00000006939	-	96	62.500	ENSGACG00000006507	rpf2	86	62.500	Gasterosteus_aculeatus
ENSODEG00000006939	-	99	71.698	ENSGAGG00000016221	RPF2	86	72.941	Gopherus_agassizii
ENSODEG00000006939	-	100	58.983	ENSGGOG00000001469	RPF2	96	58.644	Gorilla_gorilla
ENSODEG00000006939	-	94	74.131	ENSGGOG00000024187	-	93	74.131	Gorilla_gorilla
ENSODEG00000006939	-	96	62.879	ENSHBUG00000021805	rpf2	86	62.879	Haplochromis_burtoni
ENSODEG00000006939	-	96	80.081	ENSHGLG00000001322	RPF2	93	80.081	Heterocephalus_glaber_female
ENSODEG00000006939	-	99	73.358	ENSHGLG00000012697	-	95	73.358	Heterocephalus_glaber_female
ENSODEG00000006939	-	99	70.438	ENSHGLG00000012500	-	72	71.898	Heterocephalus_glaber_female
ENSODEG00000006939	-	91	65.873	ENSHGLG00100009310	-	100	68.254	Heterocephalus_glaber_male
ENSODEG00000006939	-	96	80.081	ENSHGLG00100012131	RPF2	93	80.081	Heterocephalus_glaber_male
ENSODEG00000006939	-	99	70.073	ENSHGLG00100012473	-	84	72.727	Heterocephalus_glaber_male
ENSODEG00000006939	-	99	73.047	ENSHGLG00100002981	-	95	73.047	Heterocephalus_glaber_male
ENSODEG00000006939	-	99	73.358	ENSHGLG00100000462	-	95	73.358	Heterocephalus_glaber_male
ENSODEG00000006939	-	96	64.865	ENSHCOG00000000225	rpf2	88	64.865	Hippocampus_comes
ENSODEG00000006939	-	96	54.924	ENSIPUG00000016288	rpf2	86	54.887	Ictalurus_punctatus
ENSODEG00000006939	-	99	54.710	ENSSTOG00000013114	RPF2	91	57.371	Ictidomys_tridecemlineatus
ENSODEG00000006939	-	99	78.544	ENSJJAG00000009092	Rpf2	93	80.894	Jaculus_jaculus
ENSODEG00000006939	-	96	64.228	ENSKMAG00000014609	rpf2	86	63.636	Kryptolebias_marmoratus
ENSODEG00000006939	-	96	65.447	ENSLBEG00000011907	rpf2	84	65.447	Labrus_bergylta
ENSODEG00000006939	-	99	65.091	ENSLACG00000003942	RPF2	86	66.038	Latimeria_chalumnae
ENSODEG00000006939	-	96	64.419	ENSLOCG00000016992	rpf2	87	64.419	Lepisosteus_oculatus
ENSODEG00000006939	-	99	77.372	ENSLAFG00000018219	RPF2	86	78.788	Loxodonta_africana
ENSODEG00000006939	-	100	73.220	ENSMFAG00000000417	RPF2	100	72.121	Macaca_fascicularis
ENSODEG00000006939	-	93	64.453	ENSMFAG00000036119	-	95	64.453	Macaca_fascicularis
ENSODEG00000006939	-	100	73.220	ENSMMUG00000021532	RPF2	97	78.261	Macaca_mulatta
ENSODEG00000006939	-	98	60.490	ENSMMUG00000042376	-	96	60.490	Macaca_mulatta
ENSODEG00000006939	-	100	58.983	ENSMNEG00000031683	RPF2	96	58.644	Macaca_nemestrina
ENSODEG00000006939	-	98	61.754	ENSMLEG00000042472	-	96	61.754	Mandrillus_leucophaeus
ENSODEG00000006939	-	96	61.364	ENSMAMG00000004267	rpf2	86	61.364	Mastacembelus_armatus
ENSODEG00000006939	-	96	62.879	ENSMZEG00005015632	rpf2	86	62.879	Maylandia_zebra
ENSODEG00000006939	-	99	69.708	ENSMGAG00000013429	RPF2	86	70.833	Meleagris_gallopavo
ENSODEG00000006939	-	89	62.445	ENSMAUG00000005049	Rpf2	98	62.445	Mesocricetus_auratus
ENSODEG00000006939	-	100	73.559	ENSMICG00000032086	-	100	72.727	Microcebus_murinus
ENSODEG00000006939	-	99	61.594	ENSMICG00000028979	-	90	61.594	Microcebus_murinus
ENSODEG00000006939	-	100	69.091	ENSMICG00000038169	-	95	68.310	Microcebus_murinus
ENSODEG00000006939	-	96	79.675	ENSMOCG00000005634	Rpf2	93	79.675	Microtus_ochrogaster
ENSODEG00000006939	-	96	56.818	ENSMMOG00000014844	rpf2	87	56.818	Mola_mola
ENSODEG00000006939	-	99	72.993	ENSMODG00000017919	RPF2	87	74.242	Monodelphis_domestica
ENSODEG00000006939	-	96	62.879	ENSMALG00000019046	rpf2	86	62.879	Monopterus_albus
ENSODEG00000006939	-	96	78.862	MGP_CAROLIEiJ_G0015254	Rpf2	92	80.556	Mus_caroli
ENSODEG00000006939	-	96	78.049	ENSMUSG00000038510	Rpf2	92	80.556	Mus_musculus
ENSODEG00000006939	-	99	76.277	MGP_PahariEiJ_G0030671	Rpf2	92	83.333	Mus_pahari
ENSODEG00000006939	-	96	78.862	MGP_SPRETEiJ_G0016063	Rpf2	92	80.556	Mus_spretus
ENSODEG00000006939	-	100	74.237	ENSMPUG00000010183	RPF2	84	74.237	Mustela_putorius_furo
ENSODEG00000006939	-	86	77.686	ENSMLUG00000005676	RPF2	95	77.686	Myotis_lucifugus
ENSODEG00000006939	-	96	79.268	ENSNGAG00000009701	Rpf2	93	79.268	Nannospalax_galili
ENSODEG00000006939	-	96	62.879	ENSNBRG00000011087	rpf2	86	62.879	Neolamprologus_brichardi
ENSODEG00000006939	-	85	76.271	ENSNLEG00000011848	-	95	75.546	Nomascus_leucogenys
ENSODEG00000006939	-	99	72.826	ENSNLEG00000033597	-	90	73.477	Nomascus_leucogenys
ENSODEG00000006939	-	100	72.881	ENSNLEG00000027819	RPF2	96	72.881	Nomascus_leucogenys
ENSODEG00000006939	-	100	51.536	ENSMEUG00000006421	RPF2	89	54.753	Notamacropus_eugenii
ENSODEG00000006939	-	96	62.879	ENSONIG00000011383	rpf2	86	62.879	Oreochromis_niloticus
ENSODEG00000006939	-	100	73.220	ENSOCUG00000016028	RPF2	96	73.220	Oryctolagus_cuniculus
ENSODEG00000006939	-	96	62.879	ENSORLG00000015183	rpf2	86	62.879	Oryzias_latipes
ENSODEG00000006939	-	96	63.953	ENSORLG00020008756	rpf2	85	63.953	Oryzias_latipes_hni
ENSODEG00000006939	-	96	64.341	ENSORLG00015003841	RPF2	85	64.341	Oryzias_latipes_hsok
ENSODEG00000006939	-	96	64.015	ENSOMEG00000011508	rpf2	86	64.015	Oryzias_melastigma
ENSODEG00000006939	-	100	71.864	ENSOGAG00000007438	RPF2	96	71.864	Otolemur_garnettii
ENSODEG00000006939	-	99	77.737	ENSOARG00000009886	-	86	79.167	Ovis_aries
ENSODEG00000006939	-	99	77.737	ENSOARG00000015548	-	86	79.167	Ovis_aries
ENSODEG00000006939	-	98	75.185	ENSPPAG00000032089	-	96	75.185	Pan_paniscus
ENSODEG00000006939	-	100	73.220	ENSPPAG00000035622	RPF2	96	73.220	Pan_paniscus
ENSODEG00000006939	-	95	62.766	ENSPPRG00000008363	-	93	62.766	Panthera_pardus
ENSODEG00000006939	-	100	72.542	ENSPPRG00000000320	-	96	72.542	Panthera_pardus
ENSODEG00000006939	-	100	72.542	ENSPTIG00000002060	RPF2	96	72.542	Panthera_tigris_altaica
ENSODEG00000006939	-	100	73.220	ENSPTRG00000018503	RPF2	96	73.220	Pan_troglodytes
ENSODEG00000006939	-	100	73.220	ENSPANG00000018834	RPF2	96	73.220	Papio_anubis
ENSODEG00000006939	-	96	63.968	ENSPKIG00000019506	rpf2	86	63.258	Paramormyrops_kingsleyae
ENSODEG00000006939	-	99	69.343	ENSPSIG00000014887	RPF2	86	70.455	Pelodiscus_sinensis
ENSODEG00000006939	-	96	78.455	ENSPEMG00000011413	Rpf2	93	78.455	Peromyscus_maniculatus_bairdii
ENSODEG00000006939	-	99	72.993	ENSPCIG00000028172	RPF2	94	69.283	Phascolarctos_cinereus
ENSODEG00000006939	-	96	64.015	ENSPFOG00000003396	rpf2	87	64.015	Poecilia_formosa
ENSODEG00000006939	-	96	63.258	ENSPLAG00000001226	rpf2	87	63.258	Poecilia_latipinna
ENSODEG00000006939	-	96	64.015	ENSPMEG00000007781	rpf2	87	64.015	Poecilia_mexicana
ENSODEG00000006939	-	96	63.258	ENSPREG00000020525	rpf2	87	63.258	Poecilia_reticulata
ENSODEG00000006939	-	99	77.737	ENSPPYG00000016925	RPF2	86	79.167	Pongo_abelii
ENSODEG00000006939	-	71	81.421	ENSPCAG00000002562	RPF2	70	82.184	Procavia_capensis
ENSODEG00000006939	-	100	65.862	ENSPCOG00000012785	RPF2	96	65.517	Propithecus_coquereli
ENSODEG00000006939	-	86	82.805	ENSPVAG00000003446	RPF2	78	77.917	Pteropus_vampyrus
ENSODEG00000006939	-	96	63.566	ENSPNAG00000000082	rpf2	86	62.121	Pygocentrus_nattereri
ENSODEG00000006939	-	99	76.277	ENSRNOG00000000587	Rpf2	90	76.277	Rattus_norvegicus
ENSODEG00000006939	-	99	76.667	ENSRBIG00000038389	RPF2	100	70.909	Rhinopithecus_bieti
ENSODEG00000006939	-	99	77.007	ENSRROG00000036457	RPF2	87	78.409	Rhinopithecus_roxellana
ENSODEG00000006939	-	93	71.705	ENSRROG00000039510	-	95	71.705	Rhinopithecus_roxellana
ENSODEG00000006939	-	86	71.749	ENSRROG00000028992	-	73	70.852	Rhinopithecus_roxellana
ENSODEG00000006939	-	86	75.210	ENSRROG00000036685	-	87	75.109	Rhinopithecus_roxellana
ENSODEG00000006939	-	98	36.491	YKR081C	-	83	36.491	Saccharomyces_cerevisiae
ENSODEG00000006939	-	99	66.792	ENSSBOG00000025434	-	98	63.774	Saimiri_boliviensis_boliviensis
ENSODEG00000006939	-	84	59.307	ENSSBOG00000029182	-	85	59.111	Saimiri_boliviensis_boliviensis
ENSODEG00000006939	-	85	76.037	ENSSBOG00000022486	-	83	71.901	Saimiri_boliviensis_boliviensis
ENSODEG00000006939	-	87	58.506	ENSSBOG00000030264	-	83	57.642	Saimiri_boliviensis_boliviensis
ENSODEG00000006939	-	99	65.543	ENSSBOG00000034420	-	95	62.547	Saimiri_boliviensis_boliviensis
ENSODEG00000006939	-	99	72.263	ENSSHAG00000002212	RPF2	85	73.485	Sarcophilus_harrisii
ENSODEG00000006939	-	98	64.259	ENSSFOG00015020916	rpf2	88	64.259	Scleropages_formosus
ENSODEG00000006939	-	96	62.879	ENSSMAG00000017499	rpf2	86	62.879	Scophthalmus_maximus
ENSODEG00000006939	-	96	65.098	ENSSDUG00000010383	rpf2	84	65.098	Seriola_dumerili
ENSODEG00000006939	-	96	63.710	ENSSLDG00000022111	rpf2	86	63.258	Seriola_lalandi_dorsalis
ENSODEG00000006939	-	100	47.826	ENSSARG00000012063	RPF2	96	47.826	Sorex_araneus
ENSODEG00000006939	-	99	70.149	ENSSPUG00000005108	RPF2	85	71.318	Sphenodon_punctatus
ENSODEG00000006939	-	99	62.774	ENSSPAG00000008035	rpf2	86	63.636	Stegastes_partitus
ENSODEG00000006939	-	100	74.007	ENSSSCG00000004394	RPF2	96	74.007	Sus_scrofa
ENSODEG00000006939	-	99	69.708	ENSTGUG00000012034	RPF2	86	70.833	Taeniopygia_guttata
ENSODEG00000006939	-	96	61.742	ENSTRUG00000018264	rpf2	86	61.742	Takifugu_rubripes
ENSODEG00000006939	-	96	57.955	ENSTNIG00000002749	rpf2	85	57.955	Tetraodon_nigroviridis
ENSODEG00000006939	-	80	80.676	ENSTBEG00000017151	RPF2	75	74.561	Tupaia_belangeri
ENSODEG00000006939	-	100	72.542	ENSTTRG00000012357	RPF2	96	72.542	Tursiops_truncatus
ENSODEG00000006939	-	100	73.559	ENSUAMG00000013497	RPF2	96	73.559	Ursus_americanus
ENSODEG00000006939	-	100	73.220	ENSUMAG00000025488	RPF2	96	73.220	Ursus_maritimus
ENSODEG00000006939	-	99	76.642	ENSVPAG00000009562	RPF2	87	78.030	Vicugna_pacos
ENSODEG00000006939	-	100	73.285	ENSVVUG00000006593	-	96	73.285	Vulpes_vulpes
ENSODEG00000006939	-	95	72.453	ENSVVUG00000021231	-	100	72.453	Vulpes_vulpes
ENSODEG00000006939	-	99	65.328	ENSXETG00000021335	rpf2	86	66.288	Xenopus_tropicalis
ENSODEG00000006939	-	98	64.015	ENSXCOG00000001590	rpf2	88	64.015	Xiphophorus_couchianus
ENSODEG00000006939	-	98	63.241	ENSXMAG00000021706	rpf2	86	63.600	Xiphophorus_maculatus