EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000006990 (Gene tree)
Gene ID: 101582473
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 26033 bases
Position: chrJH651599.1:11280160-11306192
Accession: 101582473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009339	RTC	PF01137.21	1e-85	1	1
ENSODEP00000009339	RTC_insert	PF05189.13	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009479	RTCA-201	1095	XM_004637006	ENSODEP00000009339	364 (aa)	-	-

Gene Model

Click here to download ENSODEG00000006990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000006990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000006990	RTCA	96	94.872	ENSG00000137996	RTCA	95	94.828	Homo_sapiens
ENSODEG00000006990	RTCA	96	72.080	ENSAPOG00000001345	rtca	95	71.839	Acanthochromis_polyacanthus
ENSODEG00000006990	RTCA	74	93.680	ENSAMEG00000008855	RTCA	100	93.680	Ailuropoda_melanoleuca
ENSODEG00000006990	RTCA	96	71.795	ENSACIG00000019643	rtca	95	71.552	Amphilophus_citrinellus
ENSODEG00000006990	RTCA	96	72.080	ENSAOCG00000014979	rtca	95	71.839	Amphiprion_ocellaris
ENSODEG00000006990	RTCA	96	72.080	ENSAPEG00000006945	rtca	95	71.839	Amphiprion_percula
ENSODEG00000006990	RTCA	98	71.268	ENSATEG00000006315	rtca	95	71.264	Anabas_testudineus
ENSODEG00000006990	RTCA	96	78.814	ENSAPLG00000015430	RTCA	99	78.632	Anas_platyrhynchos
ENSODEG00000006990	RTCA	96	94.302	ENSANAG00000025446	RTCA	95	94.253	Aotus_nancymaae
ENSODEG00000006990	RTCA	96	70.940	ENSACLG00000020770	rtca	95	70.690	Astatotilapia_calliptera
ENSODEG00000006990	RTCA	96	72.080	ENSAMXG00000043271	rtca	95	71.839	Astyanax_mexicanus
ENSODEG00000006990	RTCA	96	94.587	ENSBTAG00000006321	RTCA	95	94.540	Bos_taurus
ENSODEG00000006990	RTCA	96	94.302	ENSCJAG00000003398	RTCA	95	94.253	Callithrix_jacchus
ENSODEG00000006990	RTCA	96	94.587	ENSCAFG00000020010	RTCA	64	94.540	Canis_familiaris
ENSODEG00000006990	RTCA	96	94.587	ENSCAFG00020011528	RTCA	54	94.540	Canis_lupus_dingo
ENSODEG00000006990	RTCA	97	94.318	ENSCHIG00000018937	RTCA	95	94.253	Capra_hircus
ENSODEG00000006990	RTCA	96	93.162	ENSTSYG00000011305	RTCA	95	93.103	Carlito_syrichta
ENSODEG00000006990	RTCA	96	94.017	ENSCCAG00000021844	RTCA	95	93.966	Cebus_capucinus
ENSODEG00000006990	RTCA	96	92.033	ENSCATG00000019364	RTCA	100	95.146	Cercocebus_atys
ENSODEG00000006990	RTCA	87	95.899	ENSCLAG00000006125	RTCA	100	95.899	Chinchilla_lanigera
ENSODEG00000006990	RTCA	96	95.157	ENSCSAG00000001509	RTCA	95	95.115	Chlorocebus_sabaeus
ENSODEG00000006990	RTCA	96	93.732	ENSCHOG00000005211	RTCA	95	93.678	Choloepus_hoffmanni
ENSODEG00000006990	RTCA	96	84.046	ENSCPBG00000026658	RTCA	95	83.908	Chrysemys_picta_bellii
ENSODEG00000006990	RTCA	96	53.276	ENSCING00000007875	-	95	52.874	Ciona_intestinalis
ENSODEG00000006990	RTCA	96	52.422	ENSCSAVG00000007269	-	95	52.011	Ciona_savignyi
ENSODEG00000006990	RTCA	96	94.872	ENSCANG00000040106	RTCA	95	94.828	Colobus_angolensis_palliatus
ENSODEG00000006990	RTCA	74	92.193	ENSCGRG00001013163	Rtca	85	92.193	Cricetulus_griseus_chok1gshd
ENSODEG00000006990	RTCA	96	68.661	ENSCSEG00000000530	rtca	93	68.391	Cynoglossus_semilaevis
ENSODEG00000006990	RTCA	96	58.689	ENSCVAG00000021809	rtca	95	58.333	Cyprinodon_variegatus
ENSODEG00000006990	RTCA	96	73.219	ENSDARG00000002215	rtca	95	72.989	Danio_rerio
ENSODEG00000006990	RTCA	97	94.602	ENSDNOG00000000456	RTCA	95	94.540	Dasypus_novemcinctus
ENSODEG00000006990	RTCA	96	92.877	ENSDORG00000005448	Rtca	95	92.816	Dipodomys_ordii
ENSODEG00000006990	RTCA	96	37.931	FBgn0025630	Rtca	94	37.500	Drosophila_melanogaster
ENSODEG00000006990	RTCA	92	54.142	ENSEBUG00000008556	rtca	91	53.892	Eptatretus_burgeri
ENSODEG00000006990	RTCA	96	94.017	ENSEASG00005015926	RTCA	95	93.966	Equus_asinus_asinus
ENSODEG00000006990	RTCA	96	94.017	ENSECAG00000019831	RTCA	95	93.966	Equus_caballus
ENSODEG00000006990	RTCA	87	82.779	ENSEEUG00000001165	RTCA	95	82.622	Erinaceus_europaeus
ENSODEG00000006990	RTCA	96	71.510	ENSELUG00000003741	rtca	95	71.264	Esox_lucius
ENSODEG00000006990	RTCA	96	94.587	ENSFCAG00000024460	RTCA	95	94.540	Felis_catus
ENSODEG00000006990	RTCA	89	82.154	ENSFALG00000002443	RTCA	87	81.988	Ficedula_albicollis
ENSODEG00000006990	RTCA	96	95.726	ENSFDAG00000012070	-	95	95.690	Fukomys_damarensis
ENSODEG00000006990	RTCA	98	71.944	ENSFDAG00000016084	-	95	73.837	Fukomys_damarensis
ENSODEG00000006990	RTCA	59	70.233	ENSFHEG00000002868	rtca	96	68.142	Fundulus_heteroclitus
ENSODEG00000006990	RTCA	96	68.946	ENSGMOG00000013264	rtca	95	68.678	Gadus_morhua
ENSODEG00000006990	RTCA	96	82.336	ENSGALG00000005277	RTCA	95	82.184	Gallus_gallus
ENSODEG00000006990	RTCA	96	72.080	ENSGAFG00000011853	rtca	95	71.839	Gambusia_affinis
ENSODEG00000006990	RTCA	96	70.370	ENSGACG00000013497	rtca	95	70.115	Gasterosteus_aculeatus
ENSODEG00000006990	RTCA	77	85.305	ENSGAGG00000023306	RTCA	94	85.455	Gopherus_agassizii
ENSODEG00000006990	RTCA	96	94.017	ENSGGOG00000044018	-	95	93.966	Gorilla_gorilla
ENSODEG00000006990	RTCA	96	94.872	ENSGGOG00000009546	-	100	94.498	Gorilla_gorilla
ENSODEG00000006990	RTCA	96	70.655	ENSHBUG00000002114	rtca	95	70.402	Haplochromis_burtoni
ENSODEG00000006990	RTCA	96	94.017	ENSHGLG00000002617	RTCA	95	93.966	Heterocephalus_glaber_female
ENSODEG00000006990	RTCA	96	94.017	ENSHGLG00100006056	RTCA	95	93.966	Heterocephalus_glaber_male
ENSODEG00000006990	RTCA	96	64.672	ENSHCOG00000020628	rtca	85	64.368	Hippocampus_comes
ENSODEG00000006990	RTCA	96	72.365	ENSIPUG00000024803	rtca	95	72.126	Ictalurus_punctatus
ENSODEG00000006990	RTCA	96	82.621	ENSSTOG00000033099	-	95	82.521	Ictidomys_tridecemlineatus
ENSODEG00000006990	RTCA	96	88.034	ENSSTOG00000013528	-	93	94.340	Ictidomys_tridecemlineatus
ENSODEG00000006990	RTCA	96	66.667	ENSJJAG00000016178	Rtca	94	66.379	Jaculus_jaculus
ENSODEG00000006990	RTCA	96	72.365	ENSKMAG00000006651	rtca	95	72.126	Kryptolebias_marmoratus
ENSODEG00000006990	RTCA	88	69.159	ENSLBEG00000002448	-	99	69.159	Labrus_bergylta
ENSODEG00000006990	RTCA	96	69.516	ENSLBEG00000028971	rtca	95	69.253	Labrus_bergylta
ENSODEG00000006990	RTCA	96	78.063	ENSLACG00000013666	RTCA	95	77.874	Latimeria_chalumnae
ENSODEG00000006990	RTCA	96	73.504	ENSLOCG00000000093	rtca	95	73.276	Lepisosteus_oculatus
ENSODEG00000006990	RTCA	96	94.587	ENSLAFG00000001473	RTCA	95	94.540	Loxodonta_africana
ENSODEG00000006990	RTCA	96	95.157	ENSMFAG00000034132	RTCA	95	95.115	Macaca_fascicularis
ENSODEG00000006990	RTCA	96	94.587	ENSMMUG00000019105	RTCA	95	94.540	Macaca_mulatta
ENSODEG00000006990	RTCA	85	94.822	ENSMNEG00000037163	RTCA	100	94.822	Macaca_nemestrina
ENSODEG00000006990	RTCA	96	77.208	ENSMLEG00000042151	RTCA	94	77.011	Mandrillus_leucophaeus
ENSODEG00000006990	RTCA	96	72.934	ENSMAMG00000016536	rtca	95	72.701	Mastacembelus_armatus
ENSODEG00000006990	RTCA	96	70.940	ENSMZEG00005017945	rtca	95	70.690	Maylandia_zebra
ENSODEG00000006990	RTCA	88	79.937	ENSMGAG00000006892	RTCA	99	79.937	Meleagris_gallopavo
ENSODEG00000006990	RTCA	100	90.110	ENSMAUG00000008488	Rtca	95	92.529	Mesocricetus_auratus
ENSODEG00000006990	RTCA	85	95.469	ENSMICG00000008643	RTCA	100	95.469	Microcebus_murinus
ENSODEG00000006990	RTCA	96	92.877	ENSMOCG00000016660	Rtca	95	92.816	Microtus_ochrogaster
ENSODEG00000006990	RTCA	85	72.492	ENSMMOG00000007750	rtca	100	72.492	Mola_mola
ENSODEG00000006990	RTCA	100	87.637	ENSMODG00000003557	RTCA	95	89.943	Monodelphis_domestica
ENSODEG00000006990	RTCA	96	72.934	ENSMALG00000020844	rtca	95	72.701	Monopterus_albus
ENSODEG00000006990	RTCA	96	91.168	MGP_CAROLIEiJ_G0025565	Rtca	100	88.732	Mus_caroli
ENSODEG00000006990	RTCA	96	91.168	ENSMUSG00000000339	Rtca	100	88.732	Mus_musculus
ENSODEG00000006990	RTCA	96	90.883	MGP_PahariEiJ_G0027011	Rtca	100	88.028	Mus_pahari
ENSODEG00000006990	RTCA	96	90.883	MGP_SPRETEiJ_G0026515	Rtca	100	88.028	Mus_spretus
ENSODEG00000006990	RTCA	96	95.157	ENSMPUG00000012119	RTCA	95	95.115	Mustela_putorius_furo
ENSODEG00000006990	RTCA	98	85.794	ENSMLUG00000009922	RTCA	95	87.069	Myotis_lucifugus
ENSODEG00000006990	RTCA	96	92.308	ENSNGAG00000011540	Rtca	95	92.241	Nannospalax_galili
ENSODEG00000006990	RTCA	96	70.940	ENSNBRG00000003062	rtca	95	70.690	Neolamprologus_brichardi
ENSODEG00000006990	RTCA	96	94.872	ENSNLEG00000031426	RTCA	95	94.828	Nomascus_leucogenys
ENSODEG00000006990	RTCA	54	92.683	ENSMEUG00000010030	-	72	78.788	Notamacropus_eugenii
ENSODEG00000006990	RTCA	74	87.361	ENSOPRG00000012092	RTCA	71	87.361	Ochotona_princeps
ENSODEG00000006990	RTCA	96	71.225	ENSONIG00000007753	rtca	95	70.977	Oreochromis_niloticus
ENSODEG00000006990	RTCA	87	87.066	ENSOANG00000012055	RTCA	98	87.066	Ornithorhynchus_anatinus
ENSODEG00000006990	RTCA	96	95.442	ENSOCUG00000014247	RTCA	95	95.402	Oryctolagus_cuniculus
ENSODEG00000006990	RTCA	96	72.080	ENSORLG00000013605	rtca	95	71.839	Oryzias_latipes
ENSODEG00000006990	RTCA	96	72.080	ENSORLG00020001904	rtca	95	71.839	Oryzias_latipes_hni
ENSODEG00000006990	RTCA	96	72.080	ENSORLG00015021064	rtca	95	71.839	Oryzias_latipes_hsok
ENSODEG00000006990	RTCA	96	72.934	ENSOMEG00000000756	rtca	95	72.701	Oryzias_melastigma
ENSODEG00000006990	RTCA	96	85.185	ENSOGAG00000005627	RTCA	95	85.057	Otolemur_garnettii
ENSODEG00000006990	RTCA	87	93.396	ENSOARG00000018122	RTCA	100	93.396	Ovis_aries
ENSODEG00000006990	RTCA	96	90.934	ENSPPAG00000035119	RTCA	100	94.175	Pan_paniscus
ENSODEG00000006990	RTCA	96	94.302	ENSPPRG00000000350	RTCA	95	94.253	Panthera_pardus
ENSODEG00000006990	RTCA	96	94.302	ENSPTIG00000012816	RTCA	95	94.253	Panthera_tigris_altaica
ENSODEG00000006990	RTCA	96	90.934	ENSPTRG00000001004	RTCA	100	94.175	Pan_troglodytes
ENSODEG00000006990	RTCA	96	95.157	ENSPANG00000000346	RTCA	95	95.115	Papio_anubis
ENSODEG00000006990	RTCA	96	74.074	ENSPKIG00000001653	rtca	95	73.851	Paramormyrops_kingsleyae
ENSODEG00000006990	RTCA	96	84.615	ENSPSIG00000011408	RTCA	95	84.483	Pelodiscus_sinensis
ENSODEG00000006990	RTCA	96	92.023	ENSPEMG00000018582	Rtca	95	91.954	Peromyscus_maniculatus_bairdii
ENSODEG00000006990	RTCA	98	57.821	ENSPMAG00000009110	rtca	95	57.880	Petromyzon_marinus
ENSODEG00000006990	RTCA	96	89.744	ENSPCIG00000007684	RTCA	95	89.655	Phascolarctos_cinereus
ENSODEG00000006990	RTCA	96	72.443	ENSPFOG00000004824	rtca	95	72.206	Poecilia_formosa
ENSODEG00000006990	RTCA	96	72.650	ENSPLAG00000011753	rtca	95	72.414	Poecilia_latipinna
ENSODEG00000006990	RTCA	96	72.650	ENSPMEG00000020469	rtca	95	72.414	Poecilia_mexicana
ENSODEG00000006990	RTCA	96	73.504	ENSPREG00000001365	rtca	95	73.276	Poecilia_reticulata
ENSODEG00000006990	RTCA	96	94.872	ENSPPYG00000001115	RTCA	95	94.828	Pongo_abelii
ENSODEG00000006990	RTCA	96	91.738	ENSPCAG00000005076	RTCA	95	91.667	Procavia_capensis
ENSODEG00000006990	RTCA	96	95.726	ENSPCOG00000005603	RTCA	95	95.690	Propithecus_coquereli
ENSODEG00000006990	RTCA	96	89.835	ENSPVAG00000009478	RTCA	95	89.751	Pteropus_vampyrus
ENSODEG00000006990	RTCA	96	70.940	ENSPNYG00000004722	rtca	95	70.690	Pundamilia_nyererei
ENSODEG00000006990	RTCA	96	72.080	ENSPNAG00000022270	rtca	95	71.839	Pygocentrus_nattereri
ENSODEG00000006990	RTCA	96	91.168	ENSRNOG00000014575	Rtca	95	91.092	Rattus_norvegicus
ENSODEG00000006990	RTCA	96	90.934	ENSRBIG00000041180	RTCA	100	93.851	Rhinopithecus_bieti
ENSODEG00000006990	RTCA	96	94.302	ENSRROG00000024929	RTCA	95	94.253	Rhinopithecus_roxellana
ENSODEG00000006990	RTCA	96	93.732	ENSSBOG00000028626	RTCA	95	93.678	Saimiri_boliviensis_boliviensis
ENSODEG00000006990	RTCA	96	90.313	ENSSHAG00000001758	RTCA	95	90.230	Sarcophilus_harrisii
ENSODEG00000006990	RTCA	96	68.946	ENSSMAG00000014680	rtca	94	68.678	Scophthalmus_maximus
ENSODEG00000006990	RTCA	96	71.225	ENSSDUG00000015585	rtca	94	70.977	Seriola_dumerili
ENSODEG00000006990	RTCA	98	71.268	ENSSLDG00000018985	rtca	94	71.264	Seriola_lalandi_dorsalis
ENSODEG00000006990	RTCA	87	85.804	ENSSARG00000013993	RTCA	100	85.804	Sorex_araneus
ENSODEG00000006990	RTCA	96	71.225	ENSSPAG00000011938	rtca	95	70.977	Stegastes_partitus
ENSODEG00000006990	RTCA	96	94.302	ENSSSCG00000006865	RTCA	95	94.253	Sus_scrofa
ENSODEG00000006990	RTCA	96	82.621	ENSTGUG00000005154	RTCA	95	82.471	Taeniopygia_guttata
ENSODEG00000006990	RTCA	96	72.080	ENSTRUG00000008799	rtca	95	71.839	Takifugu_rubripes
ENSODEG00000006990	RTCA	96	72.650	ENSTNIG00000004725	rtca	95	72.414	Tetraodon_nigroviridis
ENSODEG00000006990	RTCA	59	75.926	ENSTBEG00000000943	RTCA	81	67.227	Tupaia_belangeri
ENSODEG00000006990	RTCA	96	90.659	ENSTTRG00000015327	RTCA	95	90.582	Tursiops_truncatus
ENSODEG00000006990	RTCA	90	92.073	ENSUAMG00000017265	RTCA	91	92.000	Ursus_americanus
ENSODEG00000006990	RTCA	96	93.732	ENSUMAG00000007881	RTCA	95	93.678	Ursus_maritimus
ENSODEG00000006990	RTCA	87	84.227	ENSVPAG00000001039	RTCA	84	84.227	Vicugna_pacos
ENSODEG00000006990	RTCA	96	94.302	ENSVVUG00000022041	RTCA	64	94.253	Vulpes_vulpes
ENSODEG00000006990	RTCA	96	63.842	ENSXETG00000031661	RTCA	99	61.494	Xenopus_tropicalis
ENSODEG00000006990	RTCA	96	62.678	ENSXCOG00000008002	rtca	95	62.356	Xiphophorus_couchianus
ENSODEG00000006990	RTCA	96	72.365	ENSXMAG00000005482	rtca	95	72.126	Xiphophorus_maculatus