EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000007041 (Gene tree)
Gene ID: 101564796
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 62432 bases
Position: chrJH651544.1:218799-281230
Accession: 101564796
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009396	Exo_endo_phos	PF03372.23	1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009539	CNOT6-201	2161	XM_004629296	ENSODEP00000009396	557 (aa)	XP_004629353	UPI000333DF38

Gene Model

Click here to download ENSODEG00000007041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000007041	CNOT6	100	78.097	ENSODEG00000004161	CNOT6L	99	78.097

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007041	CNOT6	100	94.794	ENSG00000113300	CNOT6	100	97.368	Homo_sapiens
ENSODEG00000007041	CNOT6	100	84.973	ENSAPOG00000009994	cnot6b	100	84.973	Acanthochromis_polyacanthus
ENSODEG00000007041	CNOT6	100	95.349	ENSAMEG00000000949	CNOT6	99	95.349	Ailuropoda_melanoleuca
ENSODEG00000007041	CNOT6	100	83.900	ENSACIG00000016566	cnot6b	100	83.900	Amphilophus_citrinellus
ENSODEG00000007041	CNOT6	100	84.973	ENSAOCG00000006893	cnot6b	100	84.973	Amphiprion_ocellaris
ENSODEG00000007041	CNOT6	100	84.973	ENSAPEG00000016949	cnot6b	100	84.973	Amphiprion_percula
ENSODEG00000007041	CNOT6	100	83.184	ENSATEG00000007862	cnot6b	100	83.184	Anabas_testudineus
ENSODEG00000007041	CNOT6	100	93.357	ENSAPLG00000012715	CNOT6	99	93.357	Anas_platyrhynchos
ENSODEG00000007041	CNOT6	100	91.382	ENSACAG00000016548	CNOT6	100	91.382	Anolis_carolinensis
ENSODEG00000007041	CNOT6	100	95.153	ENSANAG00000030436	CNOT6	96	95.153	Aotus_nancymaae
ENSODEG00000007041	CNOT6	100	83.005	ENSACLG00000008279	cnot6b	100	83.900	Astatotilapia_calliptera
ENSODEG00000007041	CNOT6	100	83.871	ENSAMXG00000034694	cnot6b	100	83.871	Astyanax_mexicanus
ENSODEG00000007041	CNOT6	100	85.305	ENSAMXG00000019140	cnot6a	100	85.305	Astyanax_mexicanus
ENSODEG00000007041	CNOT6	100	95.512	ENSBTAG00000017362	CNOT6	100	95.512	Bos_taurus
ENSODEG00000007041	CNOT6	100	94.973	ENSCJAG00000009795	CNOT6	100	94.973	Callithrix_jacchus
ENSODEG00000007041	CNOT6	100	95.691	ENSCAFG00000000464	CNOT6	100	95.691	Canis_familiaris
ENSODEG00000007041	CNOT6	100	95.691	ENSCAFG00020002441	CNOT6	100	95.691	Canis_lupus_dingo
ENSODEG00000007041	CNOT6	100	95.332	ENSCHIG00000019100	CNOT6	100	95.332	Capra_hircus
ENSODEG00000007041	CNOT6	100	93.716	ENSTSYG00000003982	CNOT6	100	93.716	Carlito_syrichta
ENSODEG00000007041	CNOT6	100	94.075	ENSCPOG00000035657	CNOT6	100	94.075	Cavia_porcellus
ENSODEG00000007041	CNOT6	100	91.203	ENSCCAG00000033670	CNOT6	100	91.203	Cebus_capucinus
ENSODEG00000007041	CNOT6	100	94.794	ENSCATG00000042014	CNOT6	100	94.794	Cercocebus_atys
ENSODEG00000007041	CNOT6	100	97.846	ENSCLAG00000010489	CNOT6	100	97.846	Chinchilla_lanigera
ENSODEG00000007041	CNOT6	100	94.794	ENSCSAG00000008165	CNOT6	100	94.794	Chlorocebus_sabaeus
ENSODEG00000007041	CNOT6	100	93.716	ENSCHOG00000009680	CNOT6	100	93.716	Choloepus_hoffmanni
ENSODEG00000007041	CNOT6	100	92.639	ENSCPBG00000008908	CNOT6	100	92.639	Chrysemys_picta_bellii
ENSODEG00000007041	CNOT6	100	94.973	ENSCANG00000026756	CNOT6	100	94.973	Colobus_angolensis_palliatus
ENSODEG00000007041	CNOT6	100	94.075	ENSCGRG00001011452	Cnot6	100	94.075	Cricetulus_griseus_chok1gshd
ENSODEG00000007041	CNOT6	100	92.460	ENSCGRG00000010407	Cnot6	100	92.460	Cricetulus_griseus_crigri
ENSODEG00000007041	CNOT6	100	84.079	ENSCSEG00000010939	cnot6b	100	84.079	Cynoglossus_semilaevis
ENSODEG00000007041	CNOT6	100	83.513	ENSCVAG00000010538	cnot6b	100	83.513	Cyprinodon_variegatus
ENSODEG00000007041	CNOT6	100	82.796	ENSDARG00000101072	cnot6b	100	82.796	Danio_rerio
ENSODEG00000007041	CNOT6	100	84.409	ENSDARG00000008255	cnot6a	100	84.409	Danio_rerio
ENSODEG00000007041	CNOT6	100	94.794	ENSDNOG00000041644	CNOT6	100	94.794	Dasypus_novemcinctus
ENSODEG00000007041	CNOT6	100	85.663	ENSDORG00000001708	Cnot6	100	85.663	Dipodomys_ordii
ENSODEG00000007041	CNOT6	100	76.208	ENSETEG00000006975	CNOT6	100	76.208	Echinops_telfairi
ENSODEG00000007041	CNOT6	100	95.153	ENSEASG00005012794	-	100	95.153	Equus_asinus_asinus
ENSODEG00000007041	CNOT6	90	90.000	ENSEASG00005012957	-	99	90.000	Equus_asinus_asinus
ENSODEG00000007041	CNOT6	100	89.228	ENSECAG00000012704	-	99	89.228	Equus_caballus
ENSODEG00000007041	CNOT6	100	95.871	ENSECAG00000019325	CNOT6	100	95.871	Equus_caballus
ENSODEG00000007041	CNOT6	100	94.794	ENSEEUG00000015382	CNOT6	100	94.794	Erinaceus_europaeus
ENSODEG00000007041	CNOT6	100	80.466	ENSELUG00000024580	cnot6a	100	80.466	Esox_lucius
ENSODEG00000007041	CNOT6	100	81.481	ENSELUG00000015981	cnot6b	99	81.481	Esox_lucius
ENSODEG00000007041	CNOT6	100	95.691	ENSFCAG00000001881	CNOT6	100	95.691	Felis_catus
ENSODEG00000007041	CNOT6	100	93.537	ENSFALG00000007699	CNOT6	100	93.537	Ficedula_albicollis
ENSODEG00000007041	CNOT6	100	97.307	ENSFDAG00000001999	CNOT6	100	97.307	Fukomys_damarensis
ENSODEG00000007041	CNOT6	65	85.714	ENSFHEG00000013756	cnot6b	94	89.744	Fundulus_heteroclitus
ENSODEG00000007041	CNOT6	95	83.365	ENSGMOG00000009767	cnot6b	99	83.365	Gadus_morhua
ENSODEG00000007041	CNOT6	100	93.537	ENSGALG00000034316	CNOT6	100	93.537	Gallus_gallus
ENSODEG00000007041	CNOT6	100	83.692	ENSGAFG00000008525	cnot6b	100	83.692	Gambusia_affinis
ENSODEG00000007041	CNOT6	95	81.853	ENSGACG00000018046	cnot6b	99	81.853	Gasterosteus_aculeatus
ENSODEG00000007041	CNOT6	100	77.379	ENSGAGG00000012176	CNOT6	100	77.061	Gopherus_agassizii
ENSODEG00000007041	CNOT6	100	94.794	ENSGGOG00000003675	CNOT6	100	94.794	Gorilla_gorilla
ENSODEG00000007041	CNOT6	100	83.184	ENSHBUG00000002819	cnot6b	100	84.079	Haplochromis_burtoni
ENSODEG00000007041	CNOT6	100	98.205	ENSHGLG00000017756	CNOT6	100	98.205	Heterocephalus_glaber_female
ENSODEG00000007041	CNOT6	100	98.205	ENSHGLG00100005747	CNOT6	100	98.205	Heterocephalus_glaber_male
ENSODEG00000007041	CNOT6	100	81.753	ENSHCOG00000016176	cnot6b	100	82.826	Hippocampus_comes
ENSODEG00000007041	CNOT6	100	84.050	ENSIPUG00000019831	cnot6a	100	84.050	Ictalurus_punctatus
ENSODEG00000007041	CNOT6	100	83.333	ENSIPUG00000017482	cnot6b	100	83.333	Ictalurus_punctatus
ENSODEG00000007041	CNOT6	100	95.332	ENSSTOG00000002803	CNOT6	100	95.332	Ictidomys_tridecemlineatus
ENSODEG00000007041	CNOT6	100	94.075	ENSJJAG00000012296	Cnot6	100	94.075	Jaculus_jaculus
ENSODEG00000007041	CNOT6	100	84.767	ENSKMAG00000004640	cnot6b	100	84.767	Kryptolebias_marmoratus
ENSODEG00000007041	CNOT6	100	82.290	ENSLBEG00000027917	cnot6b	100	83.184	Labrus_bergylta
ENSODEG00000007041	CNOT6	100	88.172	ENSLOCG00000010102	cnot6b	99	88.172	Lepisosteus_oculatus
ENSODEG00000007041	CNOT6	100	95.512	ENSLAFG00000016742	CNOT6	100	95.512	Loxodonta_africana
ENSODEG00000007041	CNOT6	100	94.794	ENSMFAG00000030867	CNOT6	100	94.794	Macaca_fascicularis
ENSODEG00000007041	CNOT6	100	94.794	ENSMMUG00000018690	CNOT6	100	94.794	Macaca_mulatta
ENSODEG00000007041	CNOT6	100	94.794	ENSMNEG00000038565	CNOT6	100	94.794	Macaca_nemestrina
ENSODEG00000007041	CNOT6	100	94.794	ENSMLEG00000010555	CNOT6	100	94.794	Mandrillus_leucophaeus
ENSODEG00000007041	CNOT6	100	85.331	ENSMAMG00000007515	cnot6b	100	85.331	Mastacembelus_armatus
ENSODEG00000007041	CNOT6	100	83.005	ENSMZEG00005012899	cnot6b	100	83.900	Maylandia_zebra
ENSODEG00000007041	CNOT6	100	95.153	ENSMAUG00000019798	Cnot6	100	95.153	Mesocricetus_auratus
ENSODEG00000007041	CNOT6	100	93.537	ENSMICG00000013018	-	100	93.537	Microcebus_murinus
ENSODEG00000007041	CNOT6	98	85.110	ENSMICG00000028378	-	99	85.110	Microcebus_murinus
ENSODEG00000007041	CNOT6	100	95.153	ENSMOCG00000021662	Cnot6	100	95.153	Microtus_ochrogaster
ENSODEG00000007041	CNOT6	100	82.437	ENSMMOG00000003227	cnot6b	100	82.437	Mola_mola
ENSODEG00000007041	CNOT6	100	93.357	ENSMODG00000003979	CNOT6	100	93.357	Monodelphis_domestica
ENSODEG00000007041	CNOT6	100	84.973	ENSMALG00000014251	cnot6b	100	84.973	Monopterus_albus
ENSODEG00000007041	CNOT6	100	95.332	MGP_CAROLIEiJ_G0016277	Cnot6	100	95.332	Mus_caroli
ENSODEG00000007041	CNOT6	100	95.332	ENSMUSG00000020362	Cnot6	100	95.332	Mus_musculus
ENSODEG00000007041	CNOT6	100	95.332	MGP_PahariEiJ_G0017413	Cnot6	100	95.332	Mus_pahari
ENSODEG00000007041	CNOT6	100	95.332	MGP_SPRETEiJ_G0017122	Cnot6	100	95.332	Mus_spretus
ENSODEG00000007041	CNOT6	100	95.871	ENSMPUG00000000587	CNOT6	96	95.871	Mustela_putorius_furo
ENSODEG00000007041	CNOT6	100	93.594	ENSMLUG00000010257	CNOT6	100	93.594	Myotis_lucifugus
ENSODEG00000007041	CNOT6	100	95.153	ENSNGAG00000008269	Cnot6	100	95.153	Nannospalax_galili
ENSODEG00000007041	CNOT6	100	83.184	ENSNBRG00000010798	cnot6b	100	84.079	Neolamprologus_brichardi
ENSODEG00000007041	CNOT6	100	93.357	ENSNLEG00000002322	CNOT6	100	93.357	Nomascus_leucogenys
ENSODEG00000007041	CNOT6	81	94.393	ENSMEUG00000000025	CNOT6	81	94.393	Notamacropus_eugenii
ENSODEG00000007041	CNOT6	88	93.317	ENSOPRG00000008244	-	88	93.317	Ochotona_princeps
ENSODEG00000007041	CNOT6	75	83.452	ENSONIG00000013027	cnot6b	99	83.452	Oreochromis_niloticus
ENSODEG00000007041	CNOT6	100	92.639	ENSOANG00000010226	CNOT6	100	92.639	Ornithorhynchus_anatinus
ENSODEG00000007041	CNOT6	100	94.097	ENSOCUG00000011083	CNOT6	100	94.097	Oryctolagus_cuniculus
ENSODEG00000007041	CNOT6	100	83.542	ENSORLG00000005059	cnot6b	100	83.542	Oryzias_latipes
ENSODEG00000007041	CNOT6	100	83.542	ENSORLG00020012784	cnot6b	100	83.542	Oryzias_latipes_hni
ENSODEG00000007041	CNOT6	94	82.792	ENSORLG00015022658	cnot6b	98	82.792	Oryzias_latipes_hsok
ENSODEG00000007041	CNOT6	100	83.721	ENSOMEG00000005295	cnot6b	100	83.721	Oryzias_melastigma
ENSODEG00000007041	CNOT6	94	95.038	ENSOGAG00000032470	CNOT6	100	95.038	Otolemur_garnettii
ENSODEG00000007041	CNOT6	97	95.018	ENSOARG00000001003	CNOT6	100	95.018	Ovis_aries
ENSODEG00000007041	CNOT6	100	94.794	ENSPPAG00000032253	CNOT6	100	94.794	Pan_paniscus
ENSODEG00000007041	CNOT6	100	95.512	ENSPPRG00000011912	CNOT6	100	95.512	Panthera_pardus
ENSODEG00000007041	CNOT6	100	95.512	ENSPTIG00000016794	CNOT6	100	95.512	Panthera_tigris_altaica
ENSODEG00000007041	CNOT6	100	94.794	ENSPTRG00000017636	CNOT6	100	94.794	Pan_troglodytes
ENSODEG00000007041	CNOT6	100	94.794	ENSPANG00000016191	CNOT6	100	94.794	Papio_anubis
ENSODEG00000007041	CNOT6	100	84.946	ENSPKIG00000021368	cnot6b	100	84.946	Paramormyrops_kingsleyae
ENSODEG00000007041	CNOT6	98	93.015	ENSPSIG00000017307	CNOT6	100	93.015	Pelodiscus_sinensis
ENSODEG00000007041	CNOT6	100	83.900	ENSPMGG00000011238	cnot6b	100	83.900	Periophthalmus_magnuspinnatus
ENSODEG00000007041	CNOT6	100	94.434	ENSPEMG00000000627	Cnot6	100	94.434	Peromyscus_maniculatus_bairdii
ENSODEG00000007041	CNOT6	100	93.178	ENSPCIG00000020319	CNOT6	99	93.178	Phascolarctos_cinereus
ENSODEG00000007041	CNOT6	100	83.513	ENSPFOG00000006291	cnot6b	100	83.513	Poecilia_formosa
ENSODEG00000007041	CNOT6	100	79.928	ENSPLAG00000008266	cnot6b	100	79.928	Poecilia_latipinna
ENSODEG00000007041	CNOT6	100	83.692	ENSPMEG00000009091	cnot6b	100	83.692	Poecilia_mexicana
ENSODEG00000007041	CNOT6	100	82.437	ENSPREG00000003713	cnot6b	100	82.437	Poecilia_reticulata
ENSODEG00000007041	CNOT6	100	94.794	ENSPPYG00000016137	CNOT6	100	94.794	Pongo_abelii
ENSODEG00000007041	CNOT6	71	93.985	ENSPCAG00000005599	-	54	97.297	Procavia_capensis
ENSODEG00000007041	CNOT6	100	89.946	ENSPCOG00000017359	CNOT6	100	90.664	Propithecus_coquereli
ENSODEG00000007041	CNOT6	100	91.382	ENSPVAG00000003069	CNOT6	100	91.382	Pteropus_vampyrus
ENSODEG00000007041	CNOT6	100	82.826	ENSPNYG00000000321	cnot6b	100	83.721	Pundamilia_nyererei
ENSODEG00000007041	CNOT6	100	85.484	ENSPNAG00000029586	cnot6a	100	85.484	Pygocentrus_nattereri
ENSODEG00000007041	CNOT6	100	83.871	ENSPNAG00000028816	cnot6b	100	83.871	Pygocentrus_nattereri
ENSODEG00000007041	CNOT6	100	94.255	ENSRNOG00000054891	Cnot6	100	94.255	Rattus_norvegicus
ENSODEG00000007041	CNOT6	100	94.614	ENSRBIG00000004309	CNOT6	100	94.614	Rhinopithecus_bieti
ENSODEG00000007041	CNOT6	100	94.614	ENSRROG00000035378	CNOT6	100	94.614	Rhinopithecus_roxellana
ENSODEG00000007041	CNOT6	100	94.973	ENSSBOG00000030494	CNOT6	100	94.973	Saimiri_boliviensis_boliviensis
ENSODEG00000007041	CNOT6	100	93.178	ENSSHAG00000017436	CNOT6	100	93.178	Sarcophilus_harrisii
ENSODEG00000007041	CNOT6	100	84.588	ENSSFOG00015022383	cnot6a	96	84.588	Scleropages_formosus
ENSODEG00000007041	CNOT6	100	86.201	ENSSFOG00015015133	CNOT6	100	86.201	Scleropages_formosus
ENSODEG00000007041	CNOT6	100	82.826	ENSSMAG00000003084	cnot6b	100	82.826	Scophthalmus_maximus
ENSODEG00000007041	CNOT6	100	84.794	ENSSDUG00000004151	cnot6b	100	84.794	Seriola_dumerili
ENSODEG00000007041	CNOT6	100	84.079	ENSSLDG00000004448	cnot6b	100	84.973	Seriola_lalandi_dorsalis
ENSODEG00000007041	CNOT6	64	76.257	ENSSARG00000012650	-	100	76.257	Sorex_araneus
ENSODEG00000007041	CNOT6	100	92.639	ENSSPUG00000007893	CNOT6	100	92.639	Sphenodon_punctatus
ENSODEG00000007041	CNOT6	100	84.794	ENSSPAG00000000149	cnot6b	100	84.794	Stegastes_partitus
ENSODEG00000007041	CNOT6	100	95.691	ENSSSCG00000014009	CNOT6	100	95.887	Sus_scrofa
ENSODEG00000007041	CNOT6	100	93.537	ENSTGUG00000001119	CNOT6	100	93.537	Taeniopygia_guttata
ENSODEG00000007041	CNOT6	100	82.226	ENSTRUG00000002818	cnot6b	100	82.226	Takifugu_rubripes
ENSODEG00000007041	CNOT6	100	82.765	ENSTNIG00000004443	cnot6b	99	82.765	Tetraodon_nigroviridis
ENSODEG00000007041	CNOT6	87	66.119	ENSTBEG00000017094	-	100	66.119	Tupaia_belangeri
ENSODEG00000007041	CNOT6	100	95.332	ENSTTRG00000009363	CNOT6	100	95.332	Tursiops_truncatus
ENSODEG00000007041	CNOT6	77	96.037	ENSUAMG00000004579	CNOT6	88	96.037	Ursus_americanus
ENSODEG00000007041	CNOT6	100	91.096	ENSUMAG00000024577	CNOT6	100	91.096	Ursus_maritimus
ENSODEG00000007041	CNOT6	83	94.393	ENSVPAG00000003593	CNOT6	83	94.393	Vicugna_pacos
ENSODEG00000007041	CNOT6	100	95.691	ENSVVUG00000026940	CNOT6	100	95.691	Vulpes_vulpes
ENSODEG00000007041	CNOT6	100	80.287	ENSXCOG00000003360	cnot6b	100	80.287	Xiphophorus_couchianus
ENSODEG00000007041	CNOT6	100	83.692	ENSXMAG00000008730	cnot6b	100	83.692	Xiphophorus_maculatus