EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000007103 (Gene tree)
Gene ID: 101587785
Gene Symbol: GPATCH1
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 38621 bases
Position: chrJH651712.1:1104276-1142896
Accession: 101587785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009490	DUF1604	PF07713.13	1.7e-35	1	1
ENSODEP00000009490	G-patch	PF01585.23	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009633	GPATCH1-201	2787	XM_004644394	ENSODEP00000009490	928 (aa)	XP_023560244	-

Gene Model

Click here to download ENSODEG00000007103's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007103's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007103	GPATCH1	99	82.655	ENSG00000076650	GPATCH1	99	82.246	Homo_sapiens
ENSODEG00000007103	GPATCH1	99	82.101	ENSAMEG00000015575	GPATCH1	99	81.799	Ailuropoda_melanoleuca
ENSODEG00000007103	GPATCH1	81	66.292	ENSAOCG00000006668	gpatch1	75	65.746	Amphiprion_ocellaris
ENSODEG00000007103	GPATCH1	81	53.946	ENSAPEG00000000026	gpatch1	90	50.861	Amphiprion_percula
ENSODEG00000007103	GPATCH1	81	52.830	ENSATEG00000014494	gpatch1	99	48.106	Anabas_testudineus
ENSODEG00000007103	GPATCH1	91	60.358	ENSAPLG00000007584	GPATCH1	96	59.677	Anas_platyrhynchos
ENSODEG00000007103	GPATCH1	99	80.749	ENSANAG00000027002	GPATCH1	99	82.032	Aotus_nancymaae
ENSODEG00000007103	GPATCH1	81	53.038	ENSACLG00000024740	gpatch1	79	53.038	Astatotilapia_calliptera
ENSODEG00000007103	GPATCH1	91	50.871	ENSAMXG00000020177	gpatch1	97	51.038	Astyanax_mexicanus
ENSODEG00000007103	GPATCH1	91	82.147	ENSBTAG00000000721	GPATCH1	99	81.458	Bos_taurus
ENSODEG00000007103	GPATCH1	99	80.535	ENSCJAG00000000684	GPATCH1	99	81.818	Callithrix_jacchus
ENSODEG00000007103	GPATCH1	99	81.585	ENSCAFG00000007457	GPATCH1	83	81.263	Canis_familiaris
ENSODEG00000007103	GPATCH1	94	81.406	ENSCAFG00020019731	GPATCH1	91	81.141	Canis_lupus_dingo
ENSODEG00000007103	GPATCH1	99	82.062	ENSCHIG00000019626	GPATCH1	99	81.458	Capra_hircus
ENSODEG00000007103	GPATCH1	97	83.925	ENSCAPG00000008827	GPATCH1	99	84.479	Cavia_aperea
ENSODEG00000007103	GPATCH1	99	86.081	ENSCPOG00000024477	GPATCH1	99	86.510	Cavia_porcellus
ENSODEG00000007103	GPATCH1	99	79.893	ENSCCAG00000024676	GPATCH1	99	81.604	Cebus_capucinus
ENSODEG00000007103	GPATCH1	99	82.976	ENSCATG00000043637	GPATCH1	99	82.995	Cercocebus_atys
ENSODEG00000007103	GPATCH1	96	87.333	ENSCLAG00000003395	-	100	87.444	Chinchilla_lanigera
ENSODEG00000007103	GPATCH1	99	80.535	ENSCSAG00000004743	GPATCH1	99	80.128	Chlorocebus_sabaeus
ENSODEG00000007103	GPATCH1	92	69.711	ENSCHOG00000012865	GPATCH1	99	69.364	Choloepus_hoffmanni
ENSODEG00000007103	GPATCH1	78	66.027	ENSCPBG00000000666	GPATCH1	92	65.479	Chrysemys_picta_bellii
ENSODEG00000007103	GPATCH1	81	34.896	ENSCING00000012518	-	84	34.635	Ciona_intestinalis
ENSODEG00000007103	GPATCH1	90	79.405	ENSCANG00000012540	GPATCH1	99	79.405	Colobus_angolensis_palliatus
ENSODEG00000007103	GPATCH1	97	79.249	ENSCGRG00001016736	Gpatch1	99	79.360	Cricetulus_griseus_chok1gshd
ENSODEG00000007103	GPATCH1	89	66.549	ENSCGRG00000005069	Gpatch1	86	85.795	Cricetulus_griseus_crigri
ENSODEG00000007103	GPATCH1	84	49.275	ENSCSEG00000019456	-	85	62.727	Cynoglossus_semilaevis
ENSODEG00000007103	GPATCH1	90	48.783	ENSDARG00000033418	gpatch1	91	50.111	Danio_rerio
ENSODEG00000007103	GPATCH1	92	80.559	ENSDNOG00000005291	GPATCH1	95	79.744	Dasypus_novemcinctus
ENSODEG00000007103	GPATCH1	94	75.629	ENSDORG00000012546	Gpatch1	95	75.000	Dipodomys_ordii
ENSODEG00000007103	GPATCH1	99	71.983	ENSETEG00000003626	GPATCH1	100	70.797	Echinops_telfairi
ENSODEG00000007103	GPATCH1	94	37.202	ENSEBUG00000011286	gpatch1	91	36.818	Eptatretus_burgeri
ENSODEG00000007103	GPATCH1	91	81.818	ENSEASG00005021162	GPATCH1	100	79.654	Equus_asinus_asinus
ENSODEG00000007103	GPATCH1	94	81.385	ENSECAG00000022743	GPATCH1	88	81.002	Equus_caballus
ENSODEG00000007103	GPATCH1	77	78.431	ENSEEUG00000012925	GPATCH1	72	78.173	Erinaceus_europaeus
ENSODEG00000007103	GPATCH1	99	47.835	ENSELUG00000018195	gpatch1	90	50.339	Esox_lucius
ENSODEG00000007103	GPATCH1	99	81.350	ENSFCAG00000014917	GPATCH1	99	80.942	Felis_catus
ENSODEG00000007103	GPATCH1	99	61.709	ENSFALG00000007821	GPATCH1	89	62.134	Ficedula_albicollis
ENSODEG00000007103	GPATCH1	97	83.408	ENSFDAG00000003871	GPATCH1	100	83.185	Fukomys_damarensis
ENSODEG00000007103	GPATCH1	79	51.756	ENSGMOG00000003830	gpatch1	94	51.276	Gadus_morhua
ENSODEG00000007103	GPATCH1	93	61.695	ENSGALG00000004839	GPATCH1	93	62.324	Gallus_gallus
ENSODEG00000007103	GPATCH1	81	51.369	ENSGACG00000017544	gpatch1	84	50.779	Gasterosteus_aculeatus
ENSODEG00000007103	GPATCH1	99	61.900	ENSGAGG00000010067	GPATCH1	99	60.651	Gopherus_agassizii
ENSODEG00000007103	GPATCH1	98	82.135	ENSGGOG00000010862	GPATCH1	99	82.308	Gorilla_gorilla
ENSODEG00000007103	GPATCH1	81	53.494	ENSHBUG00000023462	gpatch1	90	50.566	Haplochromis_burtoni
ENSODEG00000007103	GPATCH1	99	84.995	ENSHGLG00000009334	GPATCH1	99	84.566	Heterocephalus_glaber_female
ENSODEG00000007103	GPATCH1	99	85.102	ENSHGLG00100018074	GPATCH1	99	84.673	Heterocephalus_glaber_male
ENSODEG00000007103	GPATCH1	93	49.945	ENSIPUG00000014977	gpatch1	89	51.139	Ictalurus_punctatus
ENSODEG00000007103	GPATCH1	99	81.303	ENSSTOG00000003720	GPATCH1	99	80.556	Ictidomys_tridecemlineatus
ENSODEG00000007103	GPATCH1	91	80.863	ENSJJAG00000023765	Gpatch1	99	81.243	Jaculus_jaculus
ENSODEG00000007103	GPATCH1	81	52.284	ENSKMAG00000017950	gpatch1	89	50.288	Kryptolebias_marmoratus
ENSODEG00000007103	GPATCH1	81	52.174	ENSLBEG00000026527	gpatch1	79	52.927	Labrus_bergylta
ENSODEG00000007103	GPATCH1	88	57.091	ENSLACG00000008130	GPATCH1	90	56.747	Latimeria_chalumnae
ENSODEG00000007103	GPATCH1	81	57.032	ENSLOCG00000001800	gpatch1	90	53.001	Lepisosteus_oculatus
ENSODEG00000007103	GPATCH1	99	80.259	ENSLAFG00000013589	GPATCH1	99	79.957	Loxodonta_africana
ENSODEG00000007103	GPATCH1	91	83.059	ENSMFAG00000034418	GPATCH1	95	82.706	Macaca_fascicularis
ENSODEG00000007103	GPATCH1	99	82.851	ENSMMUG00000011790	GPATCH1	100	82.265	Macaca_mulatta
ENSODEG00000007103	GPATCH1	99	82.227	ENSMNEG00000045084	GPATCH1	99	81.848	Macaca_nemestrina
ENSODEG00000007103	GPATCH1	99	72.484	ENSMLEG00000043840	GPATCH1	99	72.513	Mandrillus_leucophaeus
ENSODEG00000007103	GPATCH1	81	53.105	ENSMZEG00005001926	gpatch1	80	53.030	Maylandia_zebra
ENSODEG00000007103	GPATCH1	91	62.105	ENSMGAG00000005775	GPATCH1	89	62.396	Meleagris_gallopavo
ENSODEG00000007103	GPATCH1	91	74.648	ENSMICG00000004829	GPATCH1	100	71.872	Microcebus_murinus
ENSODEG00000007103	GPATCH1	99	80.407	ENSMOCG00000000174	Gpatch1	100	80.193	Microtus_ochrogaster
ENSODEG00000007103	GPATCH1	92	47.374	ENSMMOG00000002140	gpatch1	96	46.377	Mola_mola
ENSODEG00000007103	GPATCH1	92	68.531	ENSMODG00000012226	GPATCH1	99	68.153	Monodelphis_domestica
ENSODEG00000007103	GPATCH1	81	52.711	ENSMALG00000014386	gpatch1	92	48.991	Monopterus_albus
ENSODEG00000007103	GPATCH1	99	81.672	ENSMUSG00000063808	Gpatch1	100	90.816	Mus_musculus
ENSODEG00000007103	GPATCH1	99	80.214	MGP_PahariEiJ_G0012816	Gpatch1	100	91.837	Mus_pahari
ENSODEG00000007103	GPATCH1	99	81.243	MGP_SPRETEiJ_G0030681	Gpatch1	100	91.837	Mus_spretus
ENSODEG00000007103	GPATCH1	99	81.672	ENSMPUG00000007658	GPATCH1	99	81.692	Mustela_putorius_furo
ENSODEG00000007103	GPATCH1	99	81.458	ENSMLUG00000012161	GPATCH1	99	80.707	Myotis_lucifugus
ENSODEG00000007103	GPATCH1	99	81.514	ENSNGAG00000012455	Gpatch1	99	81.081	Nannospalax_galili
ENSODEG00000007103	GPATCH1	99	82.995	ENSNLEG00000007659	GPATCH1	99	83.102	Nomascus_leucogenys
ENSODEG00000007103	GPATCH1	79	63.475	ENSMEUG00000015174	GPATCH1	78	63.475	Notamacropus_eugenii
ENSODEG00000007103	GPATCH1	81	54.334	ENSONIG00000003302	gpatch1	91	52.576	Oreochromis_niloticus
ENSODEG00000007103	GPATCH1	99	67.380	ENSOANG00000012732	GPATCH1	99	67.097	Ornithorhynchus_anatinus
ENSODEG00000007103	GPATCH1	99	81.672	ENSOCUG00000015905	GPATCH1	99	81.779	Oryctolagus_cuniculus
ENSODEG00000007103	GPATCH1	89	50.534	ENSORLG00000018706	gpatch1	87	50.890	Oryzias_latipes
ENSODEG00000007103	GPATCH1	89	50.058	ENSOMEG00000022688	gpatch1	89	50.349	Oryzias_melastigma
ENSODEG00000007103	GPATCH1	85	83.879	ENSOGAG00000004016	GPATCH1	96	85.564	Otolemur_garnettii
ENSODEG00000007103	GPATCH1	91	81.765	ENSOARG00000004365	GPATCH1	99	80.994	Ovis_aries
ENSODEG00000007103	GPATCH1	99	82.548	ENSPPAG00000020990	GPATCH1	99	82.139	Pan_paniscus
ENSODEG00000007103	GPATCH1	99	81.350	ENSPPRG00000017245	GPATCH1	99	80.942	Panthera_pardus
ENSODEG00000007103	GPATCH1	99	82.208	ENSPTIG00000019649	GPATCH1	99	81.799	Panthera_tigris_altaica
ENSODEG00000007103	GPATCH1	99	82.441	ENSPTRG00000010803	GPATCH1	99	82.032	Pan_troglodytes
ENSODEG00000007103	GPATCH1	92	82.771	ENSPANG00000012374	GPATCH1	96	82.421	Papio_anubis
ENSODEG00000007103	GPATCH1	80	55.784	ENSPKIG00000020745	gpatch1	77	55.670	Paramormyrops_kingsleyae
ENSODEG00000007103	GPATCH1	91	62.427	ENSPSIG00000013433	GPATCH1	99	61.824	Pelodiscus_sinensis
ENSODEG00000007103	GPATCH1	99	79.764	ENSPEMG00000000636	Gpatch1	99	77.350	Peromyscus_maniculatus_bairdii
ENSODEG00000007103	GPATCH1	92	69.767	ENSPCIG00000021003	GPATCH1	95	69.977	Phascolarctos_cinereus
ENSODEG00000007103	GPATCH1	71	51.574	ENSPREG00000008264	gpatch1	97	45.550	Poecilia_reticulata
ENSODEG00000007103	GPATCH1	99	79.872	ENSPPYG00000009824	GPATCH1	99	79.893	Pongo_abelii
ENSODEG00000007103	GPATCH1	83	70.465	ENSPCAG00000005931	GPATCH1	92	70.974	Procavia_capensis
ENSODEG00000007103	GPATCH1	94	76.967	ENSPCOG00000009674	GPATCH1	96	77.230	Propithecus_coquereli
ENSODEG00000007103	GPATCH1	82	84.211	ENSPVAG00000017767	GPATCH1	90	83.586	Pteropus_vampyrus
ENSODEG00000007103	GPATCH1	81	53.768	ENSPNYG00000018189	gpatch1	89	53.384	Pundamilia_nyererei
ENSODEG00000007103	GPATCH1	91	49.670	ENSPNAG00000013187	gpatch1	92	49.670	Pygocentrus_nattereri
ENSODEG00000007103	GPATCH1	99	80.815	ENSRNOG00000011584	Gpatch1	99	80.922	Rattus_norvegicus
ENSODEG00000007103	GPATCH1	99	74.866	ENSRBIG00000034723	GPATCH1	99	73.797	Rhinopithecus_bieti
ENSODEG00000007103	GPATCH1	99	82.013	ENSRROG00000024428	GPATCH1	99	81.604	Rhinopithecus_roxellana
ENSODEG00000007103	GPATCH1	99	82.139	ENSSBOG00000034650	GPATCH1	99	81.818	Saimiri_boliviensis_boliviensis
ENSODEG00000007103	GPATCH1	99	68.877	ENSSHAG00000016016	GPATCH1	99	69.035	Sarcophilus_harrisii
ENSODEG00000007103	GPATCH1	81	55.355	ENSSFOG00015011535	gpatch1	89	52.315	Scleropages_formosus
ENSODEG00000007103	GPATCH1	81	48.659	ENSSMAG00000002883	gpatch1	93	46.502	Scophthalmus_maximus
ENSODEG00000007103	GPATCH1	81	50.811	ENSSDUG00000007444	gpatch1	89	48.322	Seriola_dumerili
ENSODEG00000007103	GPATCH1	81	50.875	ENSSLDG00000002856	gpatch1	89	50.807	Seriola_lalandi_dorsalis
ENSODEG00000007103	GPATCH1	73	82.938	ENSSARG00000004108	GPATCH1	72	82.938	Sorex_araneus
ENSODEG00000007103	GPATCH1	91	82.497	ENSSSCG00000002865	GPATCH1	94	81.564	Sus_scrofa
ENSODEG00000007103	GPATCH1	99	62.487	ENSTGUG00000009401	GPATCH1	91	62.544	Taeniopygia_guttata
ENSODEG00000007103	GPATCH1	81	52.225	ENSTRUG00000005785	-	90	49.475	Takifugu_rubripes
ENSODEG00000007103	GPATCH1	81	51.963	ENSTRUG00000025081	gpatch1	90	49.475	Takifugu_rubripes
ENSODEG00000007103	GPATCH1	80	54.047	ENSTNIG00000002554	gpatch1	96	53.716	Tetraodon_nigroviridis
ENSODEG00000007103	GPATCH1	63	72.414	ENSTBEG00000007750	-	81	72.414	Tupaia_belangeri
ENSODEG00000007103	GPATCH1	99	75.242	ENSTTRG00000012221	GPATCH1	99	74.439	Tursiops_truncatus
ENSODEG00000007103	GPATCH1	91	80.958	ENSUMAG00000014645	GPATCH1	99	80.000	Ursus_maritimus
ENSODEG00000007103	GPATCH1	80	93.714	ENSVPAG00000010313	GPATCH1	86	94.022	Vicugna_pacos
ENSODEG00000007103	GPATCH1	94	81.519	ENSVVUG00000016572	GPATCH1	91	81.257	Vulpes_vulpes
ENSODEG00000007103	GPATCH1	99	49.684	ENSXETG00000018276	gpatch1	93	52.146	Xenopus_tropicalis