EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000007109 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1639 bases
Position: chrJH651622.1:3863281-3864919
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009500	RRM_1	PF00076.22	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009643	-	1212	-	ENSODEP00000009500	403 (aa)	-	-

Gene Model

Click here to download ENSODEG00000007109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000007109	-	92	54.286	ENSODEG00000004418	-	74	82.443
ENSODEG00000007109	-	68	36.598	ENSODEG00000002610	CPSF7	74	40.376

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007109	-	64	70.175	ENSG00000149532	CPSF7	100	36.735	Homo_sapiens
ENSODEG00000007109	-	66	76.101	ENSG00000111605	CPSF6	100	66.109	Homo_sapiens
ENSODEG00000007109	-	66	75.472	ENSAMEG00000011781	CPSF6	79	76.821	Ailuropoda_melanoleuca
ENSODEG00000007109	-	94	30.273	ENSAOCG00000012357	CPSF7	63	35.252	Amphiprion_ocellaris
ENSODEG00000007109	-	94	31.017	ENSAPEG00000015375	CPSF7	63	35.252	Amphiprion_percula
ENSODEG00000007109	-	66	74.214	ENSACAG00000004381	CPSF6	79	75.497	Anolis_carolinensis
ENSODEG00000007109	-	66	80.576	ENSANAG00000019240	CPSF6	100	59.023	Aotus_nancymaae
ENSODEG00000007109	-	74	61.635	ENSAMXG00000016745	CPSF6	81	62.252	Astyanax_mexicanus
ENSODEG00000007109	-	66	76.101	ENSBTAG00000007323	CPSF6	79	77.483	Bos_taurus
ENSODEG00000007109	-	66	76.101	ENSCJAG00000001798	CPSF6	100	66.667	Callithrix_jacchus
ENSODEG00000007109	-	89	35.817	ENSCJAG00000019282	CPSF7	87	38.249	Callithrix_jacchus
ENSODEG00000007109	-	66	80.576	ENSCAFG00000000424	CPSF6	99	67.912	Canis_familiaris
ENSODEG00000007109	-	66	76.101	ENSCAFG00020016950	CPSF6	79	77.483	Canis_lupus_dingo
ENSODEG00000007109	-	66	76.101	ENSCHIG00000010792	CPSF6	79	77.483	Capra_hircus
ENSODEG00000007109	-	66	80.576	ENSTSYG00000008591	CPSF6	98	67.609	Carlito_syrichta
ENSODEG00000007109	-	57	44.828	ENSCAPG00000006384	CPSF7	72	40.952	Cavia_aperea
ENSODEG00000007109	-	68	38.743	ENSCPOG00000009980	CPSF7	74	40.952	Cavia_porcellus
ENSODEG00000007109	-	66	76.101	ENSCPOG00000015201	CPSF6	79	77.483	Cavia_porcellus
ENSODEG00000007109	-	66	76.101	ENSCCAG00000028149	CPSF6	100	66.528	Cebus_capucinus
ENSODEG00000007109	-	87	76.101	ENSCATG00000039288	CPSF6	100	69.118	Cercocebus_atys
ENSODEG00000007109	-	66	80.576	ENSCLAG00000010149	CPSF6	78	82.443	Chinchilla_lanigera
ENSODEG00000007109	-	66	76.101	ENSCSAG00000004232	CPSF6	74	77.483	Chlorocebus_sabaeus
ENSODEG00000007109	-	66	80.576	ENSCANG00000037294	CPSF6	96	70.175	Colobus_angolensis_palliatus
ENSODEG00000007109	-	66	76.101	ENSCGRG00001018082	Cpsf6	76	82.443	Cricetulus_griseus_chok1gshd
ENSODEG00000007109	-	66	80.576	ENSCGRG00000016909	Cpsf6	78	82.443	Cricetulus_griseus_crigri
ENSODEG00000007109	-	74	32.890	ENSCSEG00000001956	CPSF7	63	49.275	Cynoglossus_semilaevis
ENSODEG00000007109	-	66	63.522	ENSCSEG00000008967	cpsf6	82	64.238	Cynoglossus_semilaevis
ENSODEG00000007109	-	74	33.762	ENSCVAG00000007392	CPSF7	55	50.000	Cyprinodon_variegatus
ENSODEG00000007109	-	73	62.264	ENSDARG00000018618	cpsf6	79	62.914	Danio_rerio
ENSODEG00000007109	-	66	80.576	ENSDORG00000002950	Cpsf6	76	82.443	Dipodomys_ordii
ENSODEG00000007109	-	66	75.472	ENSETEG00000002097	CPSF6	74	76.821	Echinops_telfairi
ENSODEG00000007109	-	94	38.462	ENSETEG00000003765	CPSF7	74	39.252	Echinops_telfairi
ENSODEG00000007109	-	100	42.620	ENSEBUG00000003540	cpsf6	73	49.772	Eptatretus_burgeri
ENSODEG00000007109	-	66	76.101	ENSEASG00005008066	CPSF6	79	77.483	Equus_asinus_asinus
ENSODEG00000007109	-	66	76.101	ENSECAG00000015988	CPSF6	79	77.483	Equus_caballus
ENSODEG00000007109	-	64	71.930	ENSECAG00000018521	CPSF7	89	38.710	Equus_caballus
ENSODEG00000007109	-	66	77.698	ENSEEUG00000015039	CPSF6	73	79.389	Erinaceus_europaeus
ENSODEG00000007109	-	66	76.101	ENSFCAG00000002855	CPSF6	79	77.483	Felis_catus
ENSODEG00000007109	-	64	71.930	ENSFCAG00000013677	CPSF7	89	38.710	Felis_catus
ENSODEG00000007109	-	58	83.178	ENSFALG00000010157	CPSF6	78	85.859	Ficedula_albicollis
ENSODEG00000007109	-	66	80.576	ENSFDAG00000002281	CPSF6	75	82.443	Fukomys_damarensis
ENSODEG00000007109	-	89	36.609	ENSFDAG00000003919	CPSF7	74	41.429	Fukomys_damarensis
ENSODEG00000007109	-	66	64.151	ENSFHEG00000019693	cpsf6	77	64.901	Fundulus_heteroclitus
ENSODEG00000007109	-	56	62.346	ENSGMOG00000012951	cpsf6	55	64.667	Gadus_morhua
ENSODEG00000007109	-	89	36.776	ENSGALG00000040962	CPSF7	66	40.553	Gallus_gallus
ENSODEG00000007109	-	66	76.101	ENSGGOG00000008211	CPSF6	100	69.118	Gorilla_gorilla
ENSODEG00000007109	-	89	37.437	ENSHGLG00000019090	-	76	41.429	Heterocephalus_glaber_female
ENSODEG00000007109	-	66	76.101	ENSHGLG00000000792	CPSF6	79	77.483	Heterocephalus_glaber_female
ENSODEG00000007109	-	89	36.118	ENSHGLG00100013933	-	76	41.429	Heterocephalus_glaber_male
ENSODEG00000007109	-	66	80.576	ENSHGLG00100013861	CPSF6	78	82.443	Heterocephalus_glaber_male
ENSODEG00000007109	-	66	63.522	ENSHCOG00000014555	cpsf6	79	64.238	Hippocampus_comes
ENSODEG00000007109	-	66	80.576	ENSSTOG00000014133	CPSF6	78	82.443	Ictidomys_tridecemlineatus
ENSODEG00000007109	-	66	80.576	ENSJJAG00000014647	Cpsf6	77	82.443	Jaculus_jaculus
ENSODEG00000007109	-	62	36.441	ENSLBEG00000000947	CPSF7	66	34.899	Labrus_bergylta
ENSODEG00000007109	-	66	70.440	ENSLACG00000008625	CPSF6	79	71.523	Latimeria_chalumnae
ENSODEG00000007109	-	87	34.430	ENSLACG00000005542	CPSF7	60	53.086	Latimeria_chalumnae
ENSODEG00000007109	-	67	66.667	ENSLOCG00000016190	cpsf6	62	67.550	Lepisosteus_oculatus
ENSODEG00000007109	-	67	76.101	ENSLAFG00000030413	CPSF6	99	62.630	Loxodonta_africana
ENSODEG00000007109	-	66	76.101	ENSMFAG00000045318	CPSF6	100	69.118	Macaca_fascicularis
ENSODEG00000007109	-	66	76.101	ENSMMUG00000002921	CPSF6	100	65.690	Macaca_mulatta
ENSODEG00000007109	-	66	76.101	ENSMNEG00000036311	CPSF6	100	69.263	Macaca_nemestrina
ENSODEG00000007109	-	86	80.576	ENSMLEG00000003957	CPSF6	96	70.175	Mandrillus_leucophaeus
ENSODEG00000007109	-	66	79.137	ENSMGAG00000010552	CPSF6	78	80.916	Meleagris_gallopavo
ENSODEG00000007109	-	66	76.101	ENSMAUG00000013240	Cpsf6	79	77.483	Mesocricetus_auratus
ENSODEG00000007109	-	66	76.101	ENSMICG00000007385	-	100	69.263	Microcebus_murinus
ENSODEG00000007109	-	66	76.101	ENSMOCG00000013982	Cpsf6	79	77.483	Microtus_ochrogaster
ENSODEG00000007109	-	63	49.219	ENSMODG00000020364	CPSF7	75	40.000	Monodelphis_domestica
ENSODEG00000007109	-	71	64.151	ENSMALG00000014908	cpsf6	74	64.901	Monopterus_albus
ENSODEG00000007109	-	66	76.101	MGP_CAROLIEiJ_G0015834	Cpsf6	79	77.483	Mus_caroli
ENSODEG00000007109	-	66	76.101	ENSMUSG00000055531	Cpsf6	79	77.483	Mus_musculus
ENSODEG00000007109	-	87	75.472	MGP_PahariEiJ_G0031253	Cpsf6	78	76.821	Mus_pahari
ENSODEG00000007109	-	66	76.101	MGP_SPRETEiJ_G0016657	Cpsf6	79	77.483	Mus_spretus
ENSODEG00000007109	-	89	55.789	ENSMLUG00000028728	-	83	74.172	Myotis_lucifugus
ENSODEG00000007109	-	66	76.101	ENSNGAG00000015901	Cpsf6	79	77.483	Nannospalax_galili
ENSODEG00000007109	-	66	76.101	ENSNLEG00000003798	CPSF6	100	69.263	Nomascus_leucogenys
ENSODEG00000007109	-	87	74.214	ENSMEUG00000015041	CPSF6	74	75.497	Notamacropus_eugenii
ENSODEG00000007109	-	63	51.163	ENSMEUG00000002261	CPSF7	74	40.566	Notamacropus_eugenii
ENSODEG00000007109	-	66	79.856	ENSOPRG00000005199	CPSF6	73	81.679	Ochotona_princeps
ENSODEG00000007109	-	86	78.417	ENSOANG00000005944	CPSF6	78	79.851	Ornithorhynchus_anatinus
ENSODEG00000007109	-	66	76.101	ENSOCUG00000013505	CPSF6	74	77.483	Oryctolagus_cuniculus
ENSODEG00000007109	-	61	52.137	ENSOCUG00000024726	CPSF7	67	40.092	Oryctolagus_cuniculus
ENSODEG00000007109	-	61	47.143	ENSORLG00020012657	CPSF7	52	47.143	Oryzias_latipes_hni
ENSODEG00000007109	-	66	80.576	ENSOARG00000020532	CPSF6	72	87.879	Ovis_aries
ENSODEG00000007109	-	68	48.322	ENSOARG00000012937	CPSF7	67	41.509	Ovis_aries
ENSODEG00000007109	-	66	76.101	ENSPPRG00000021620	CPSF6	79	77.483	Panthera_pardus
ENSODEG00000007109	-	89	34.483	ENSPPRG00000008538	CPSF7	74	41.589	Panthera_pardus
ENSODEG00000007109	-	58	85.047	ENSPTIG00000004079	CPSF6	77	87.879	Panthera_tigris_altaica
ENSODEG00000007109	-	66	76.101	ENSPTRG00000005205	CPSF6	100	69.118	Pan_troglodytes
ENSODEG00000007109	-	66	76.101	ENSPANG00000011641	CPSF6	100	69.118	Papio_anubis
ENSODEG00000007109	-	67	66.250	ENSPKIG00000022613	CPSF6	79	67.105	Paramormyrops_kingsleyae
ENSODEG00000007109	-	59	45.614	ENSPKIG00000018054	CPSF7	58	42.614	Paramormyrops_kingsleyae
ENSODEG00000007109	-	73	67.296	ENSPKIG00000003081	-	79	68.212	Paramormyrops_kingsleyae
ENSODEG00000007109	-	66	80.576	ENSPEMG00000007973	Cpsf6	78	82.443	Peromyscus_maniculatus_bairdii
ENSODEG00000007109	-	80	50.633	ENSPMAG00000000657	cpsf6	59	51.880	Petromyzon_marinus
ENSODEG00000007109	-	66	74.214	ENSPCIG00000019063	CPSF6	79	75.497	Phascolarctos_cinereus
ENSODEG00000007109	-	63	49.219	ENSPCIG00000002551	CPSF7	77	39.535	Phascolarctos_cinereus
ENSODEG00000007109	-	66	64.780	ENSPLAG00000005715	cpsf6	85	65.563	Poecilia_latipinna
ENSODEG00000007109	-	66	64.780	ENSPMEG00000001353	cpsf6	79	65.563	Poecilia_mexicana
ENSODEG00000007109	-	66	64.780	ENSPREG00000004417	cpsf6	79	65.563	Poecilia_reticulata
ENSODEG00000007109	-	66	76.101	ENSPCAG00000011574	CPSF6	74	77.483	Procavia_capensis
ENSODEG00000007109	-	66	76.101	ENSPCOG00000024384	CPSF6	100	66.320	Propithecus_coquereli
ENSODEG00000007109	-	87	76.101	ENSPVAG00000015753	CPSF6	74	77.483	Pteropus_vampyrus
ENSODEG00000007109	-	74	63.522	ENSPNAG00000024098	CPSF6	79	64.238	Pygocentrus_nattereri
ENSODEG00000007109	-	64	70.175	ENSRBIG00000031429	CPSF7	89	38.249	Rhinopithecus_bieti
ENSODEG00000007109	-	66	76.101	ENSRBIG00000042827	CPSF6	100	69.328	Rhinopithecus_bieti
ENSODEG00000007109	-	66	76.101	ENSRROG00000042758	CPSF6	100	69.474	Rhinopithecus_roxellana
ENSODEG00000007109	-	66	80.576	ENSSBOG00000010652	CPSF6	97	70.175	Saimiri_boliviensis_boliviensis
ENSODEG00000007109	-	51	51.163	ENSSHAG00000011964	CPSF7	69	40.566	Sarcophilus_harrisii
ENSODEG00000007109	-	66	78.417	ENSSHAG00000006635	CPSF6	78	80.153	Sarcophilus_harrisii
ENSODEG00000007109	-	87	32.857	ENSSFOG00015010288	cpsf7	61	50.000	Scleropages_formosus
ENSODEG00000007109	-	75	65.839	ENSSFOG00015001688	CPSF6	59	67.550	Scleropages_formosus
ENSODEG00000007109	-	66	75.472	ENSSARG00000006743	CPSF6	74	76.821	Sorex_araneus
ENSODEG00000007109	-	67	74.843	ENSSPUG00000001238	CPSF6	80	76.159	Sphenodon_punctatus
ENSODEG00000007109	-	73	51.818	ENSSPUG00000019344	CPSF7	76	40.476	Sphenodon_punctatus
ENSODEG00000007109	-	58	85.047	ENSSSCG00000038031	CPSF6	72	87.879	Sus_scrofa
ENSODEG00000007109	-	58	85.047	ENSUMAG00000020779	CPSF6	77	87.879	Ursus_maritimus
ENSODEG00000007109	-	66	80.576	ENSVPAG00000008469	CPSF6	73	82.443	Vicugna_pacos
ENSODEG00000007109	-	58	85.047	ENSVVUG00000010156	-	72	87.879	Vulpes_vulpes
ENSODEG00000007109	-	67	38.411	ENSXETG00000006715	cpsf7	64	41.622	Xenopus_tropicalis
ENSODEG00000007109	-	66	64.780	ENSXMAG00000003459	cpsf6	74	65.563	Xiphophorus_maculatus