EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000007221 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 351 bases
Position: chrJH651567.1:4687724-4688074
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009648	PWI	PF01480.17	3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009792	-	234	-	ENSODEP00000009648	77 (aa)	-	-

Gene Model

Click here to download ENSODEG00000007221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000007221	-	99	82.895	ENSODEG00000002361	-	97	82.895
ENSODEG00000007221	-	97	90.667	ENSODEG00000019473	-	91	94.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007221	-	99	93.421	ENSG00000133226	SRRM1	96	93.421	Homo_sapiens
ENSODEG00000007221	-	99	86.842	ENSAMXG00000040320	-	71	86.842	Astyanax_mexicanus
ENSODEG00000007221	-	97	86.667	ENSCVAG00000000504	-	65	86.667	Cyprinodon_variegatus
ENSODEG00000007221	-	90	85.507	ENSFCAG00000044640	-	64	85.507	Felis_catus
ENSODEG00000007221	-	94	95.833	ENSFALG00000000476	SRRM1	100	97.183	Ficedula_albicollis
ENSODEG00000007221	-	99	85.526	ENSFHEG00000007359	-	78	85.526	Fundulus_heteroclitus
ENSODEG00000007221	-	99	93.421	ENSGALG00000001283	SRRM1	96	93.421	Gallus_gallus
ENSODEG00000007221	-	99	88.158	ENSHBUG00000020354	-	91	91.667	Haplochromis_burtoni
ENSODEG00000007221	-	92	78.873	ENSHGLG00100010430	-	87	78.873	Heterocephalus_glaber_male
ENSODEG00000007221	-	99	86.842	ENSKMAG00000013810	-	80	90.278	Kryptolebias_marmoratus
ENSODEG00000007221	-	99	86.842	ENSMMOG00000002390	-	75	86.842	Mola_mola
ENSODEG00000007221	-	92	97.183	MGP_CAROLIEiJ_G0026636	Srrm1	51	97.183	Mus_caroli
ENSODEG00000007221	-	92	97.183	ENSMUSG00000028809	Srrm1	51	97.183	Mus_musculus
ENSODEG00000007221	-	92	97.183	MGP_PahariEiJ_G0028969	Srrm1	51	97.183	Mus_pahari
ENSODEG00000007221	-	92	97.183	MGP_SPRETEiJ_G0027616	Srrm1	51	97.183	Mus_spretus
ENSODEG00000007221	-	99	88.158	ENSORLG00020018419	-	91	91.667	Oryzias_latipes_hni
ENSODEG00000007221	-	92	85.915	ENSPTIG00000022093	-	70	85.915	Panthera_tigris_altaica
ENSODEG00000007221	-	99	84.211	ENSPMGG00000009036	-	71	84.211	Periophthalmus_magnuspinnatus
ENSODEG00000007221	-	99	88.158	ENSPMEG00000011776	-	91	91.667	Poecilia_mexicana
ENSODEG00000007221	-	99	88.158	ENSPMEG00000002615	-	91	91.667	Poecilia_mexicana
ENSODEG00000007221	-	99	85.526	ENSPNAG00000005888	-	73	85.526	Pygocentrus_nattereri
ENSODEG00000007221	-	99	93.421	ENSSBOG00000019884	SRRM1	96	93.421	Saimiri_boliviensis_boliviensis
ENSODEG00000007221	-	94	95.833	ENSTGUG00000016669	-	100	95.833	Taeniopygia_guttata
ENSODEG00000007221	-	99	92.105	ENSUAMG00000011740	-	84	92.105	Ursus_americanus