EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000007258 (Gene tree)
Gene ID: 101562841
Gene Symbol: SRFBP1
Alias: -
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 51572 bases
Position: chrJH651555.1:16895446-16947017
Accession: 101562841
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009698	BUD22	PF09073.10	2.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009843	SRFBP1-201	1230	XM_004631340	ENSODEP00000009698	409 (aa)	-	-

Gene Model

Click here to download ENSODEG00000007258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007258	SRFBP1	100	73.077	ENSG00000151304	SRFBP1	97	73.077	Homo_sapiens
ENSODEG00000007258	SRFBP1	75	66.667	ENSAPOG00000021469	-	65	66.667	Acanthochromis_polyacanthus
ENSODEG00000007258	SRFBP1	100	69.139	ENSAMEG00000018050	SRFBP1	97	69.378	Ailuropoda_melanoleuca
ENSODEG00000007258	SRFBP1	100	37.587	ENSACIG00000019127	-	96	37.907	Amphilophus_citrinellus
ENSODEG00000007258	SRFBP1	75	66.667	ENSAOCG00000002182	-	81	35.244	Amphiprion_ocellaris
ENSODEG00000007258	SRFBP1	75	66.667	ENSAPEG00000003041	-	65	66.667	Amphiprion_percula
ENSODEG00000007258	SRFBP1	90	73.333	ENSATEG00000007289	-	82	37.759	Anabas_testudineus
ENSODEG00000007258	SRFBP1	100	44.550	ENSACAG00000003779	SRFBP1	97	44.550	Anolis_carolinensis
ENSODEG00000007258	SRFBP1	100	71.875	ENSANAG00000022485	SRFBP1	96	71.875	Aotus_nancymaae
ENSODEG00000007258	SRFBP1	100	35.106	ENSACLG00000013909	-	86	34.454	Astatotilapia_calliptera
ENSODEG00000007258	SRFBP1	72	45.614	ENSAMXG00000040976	srfbp1	88	45.614	Astyanax_mexicanus
ENSODEG00000007258	SRFBP1	100	69.471	ENSBTAG00000014320	SRFBP1	99	69.712	Bos_taurus
ENSODEG00000007258	SRFBP1	100	71.875	ENSCJAG00000017177	SRFBP1	97	71.875	Callithrix_jacchus
ENSODEG00000007258	SRFBP1	100	67.866	ENSCAFG00000000512	SRFBP1	97	68.106	Canis_familiaris
ENSODEG00000007258	SRFBP1	100	67.866	ENSCAFG00020009389	SRFBP1	96	68.106	Canis_lupus_dingo
ENSODEG00000007258	SRFBP1	100	50.847	ENSTSYG00000006869	-	99	50.363	Carlito_syrichta
ENSODEG00000007258	SRFBP1	100	67.548	ENSTSYG00000008630	-	97	67.308	Carlito_syrichta
ENSODEG00000007258	SRFBP1	100	78.744	ENSCPOG00000004695	SRFBP1	97	78.744	Cavia_porcellus
ENSODEG00000007258	SRFBP1	100	71.154	ENSCCAG00000032237	-	97	71.154	Cebus_capucinus
ENSODEG00000007258	SRFBP1	100	72.837	ENSCATG00000040904	SRFBP1	97	72.837	Cercocebus_atys
ENSODEG00000007258	SRFBP1	100	79.177	ENSCLAG00000003630	SRFBP1	96	79.177	Chinchilla_lanigera
ENSODEG00000007258	SRFBP1	100	69.784	ENSCSAG00000014636	SRFBP1	97	71.703	Chlorocebus_sabaeus
ENSODEG00000007258	SRFBP1	100	72.115	ENSCANG00000041298	SRFBP1	97	72.115	Colobus_angolensis_palliatus
ENSODEG00000007258	SRFBP1	100	64.593	ENSCGRG00001000718	Srfbp1	94	64.593	Cricetulus_griseus_chok1gshd
ENSODEG00000007258	SRFBP1	100	64.354	ENSCGRG00000010837	Srfbp1	100	64.354	Cricetulus_griseus_crigri
ENSODEG00000007258	SRFBP1	71	70.000	ENSCSEG00000011789	-	99	39.713	Cynoglossus_semilaevis
ENSODEG00000007258	SRFBP1	100	35.714	ENSCVAG00000013010	-	95	36.190	Cyprinodon_variegatus
ENSODEG00000007258	SRFBP1	78	47.170	ENSDARG00000075323	srfbp1	61	47.170	Danio_rerio
ENSODEG00000007258	SRFBP1	82	62.865	ENSDNOG00000017733	SRFBP1	100	62.865	Dasypus_novemcinctus
ENSODEG00000007258	SRFBP1	82	57.143	ENSETEG00000012408	SRFBP1	100	56.250	Echinops_telfairi
ENSODEG00000007258	SRFBP1	72	47.059	ENSEBUG00000007806	SRFBP1	56	47.059	Eptatretus_burgeri
ENSODEG00000007258	SRFBP1	100	72.115	ENSEASG00005012421	SRFBP1	96	71.875	Equus_asinus_asinus
ENSODEG00000007258	SRFBP1	100	72.115	ENSECAG00000015330	SRFBP1	96	71.154	Equus_caballus
ENSODEG00000007258	SRFBP1	100	60.671	ENSEEUG00000011514	SRFBP1	96	59.952	Erinaceus_europaeus
ENSODEG00000007258	SRFBP1	100	35.099	ENSELUG00000018381	-	95	35.982	Esox_lucius
ENSODEG00000007258	SRFBP1	100	69.712	ENSFCAG00000035118	SRFBP1	96	69.952	Felis_catus
ENSODEG00000007258	SRFBP1	100	40.460	ENSFALG00000007595	SRFBP1	100	40.920	Ficedula_albicollis
ENSODEG00000007258	SRFBP1	100	74.940	ENSFDAG00000005102	SRFBP1	96	74.940	Fukomys_damarensis
ENSODEG00000007258	SRFBP1	100	33.671	ENSFHEG00000000477	-	83	33.469	Fundulus_heteroclitus
ENSODEG00000007258	SRFBP1	99	34.752	ENSGMOG00000012729	-	83	35.749	Gadus_morhua
ENSODEG00000007258	SRFBP1	100	40.732	ENSGALG00000005316	SRFBP1	97	41.531	Gallus_gallus
ENSODEG00000007258	SRFBP1	74	65.714	ENSGAFG00000018777	-	85	34.483	Gambusia_affinis
ENSODEG00000007258	SRFBP1	100	38.785	ENSGACG00000009055	-	81	39.019	Gasterosteus_aculeatus
ENSODEG00000007258	SRFBP1	100	43.488	ENSGAGG00000024915	SRFBP1	99	43.488	Gopherus_agassizii
ENSODEG00000007258	SRFBP1	100	73.558	ENSGGOG00000007725	SRFBP1	97	73.558	Gorilla_gorilla
ENSODEG00000007258	SRFBP1	83	58.261	ENSIPUG00000014640	srfbp1	86	54.264	Ictalurus_punctatus
ENSODEG00000007258	SRFBP1	100	68.825	ENSSTOG00000029184	SRFBP1	95	68.825	Ictidomys_tridecemlineatus
ENSODEG00000007258	SRFBP1	100	61.058	ENSJJAG00000013229	Srfbp1	100	60.577	Jaculus_jaculus
ENSODEG00000007258	SRFBP1	100	34.389	ENSLBEG00000013924	-	93	33.110	Labrus_bergylta
ENSODEG00000007258	SRFBP1	82	34.615	ENSLACG00000004456	SRFBP1	100	34.890	Latimeria_chalumnae
ENSODEG00000007258	SRFBP1	100	41.216	ENSLOCG00000008772	SRFBP1	98	41.216	Lepisosteus_oculatus
ENSODEG00000007258	SRFBP1	100	69.305	ENSLAFG00000015303	SRFBP1	95	69.065	Loxodonta_africana
ENSODEG00000007258	SRFBP1	100	72.596	ENSMFAG00000031263	SRFBP1	97	72.596	Macaca_fascicularis
ENSODEG00000007258	SRFBP1	100	72.596	ENSMMUG00000021009	SRFBP1	98	72.596	Macaca_mulatta
ENSODEG00000007258	SRFBP1	100	72.596	ENSMNEG00000040870	SRFBP1	97	72.596	Macaca_nemestrina
ENSODEG00000007258	SRFBP1	89	76.667	ENSMAMG00000004632	-	84	36.501	Mastacembelus_armatus
ENSODEG00000007258	SRFBP1	100	35.853	ENSMZEG00005000432	-	86	35.181	Maylandia_zebra
ENSODEG00000007258	SRFBP1	100	62.590	ENSMAUG00000009431	Srfbp1	95	62.590	Mesocricetus_auratus
ENSODEG00000007258	SRFBP1	100	70.192	ENSMICG00000042923	SRFBP1	97	70.192	Microcebus_murinus
ENSODEG00000007258	SRFBP1	100	61.391	ENSMOCG00000006206	Srfbp1	94	61.391	Microtus_ochrogaster
ENSODEG00000007258	SRFBP1	100	52.745	ENSMODG00000013487	-	96	52.745	Monodelphis_domestica
ENSODEG00000007258	SRFBP1	99	33.333	ENSMALG00000001812	-	86	32.927	Monopterus_albus
ENSODEG00000007258	SRFBP1	100	61.098	MGP_CAROLIEiJ_G0022271	Srfbp1	94	60.621	Mus_caroli
ENSODEG00000007258	SRFBP1	100	60.143	ENSMUSG00000024528	Srfbp1	94	60.143	Mus_musculus
ENSODEG00000007258	SRFBP1	100	61.098	MGP_PahariEiJ_G0019004	Srfbp1	94	61.098	Mus_pahari
ENSODEG00000007258	SRFBP1	100	60.382	MGP_SPRETEiJ_G0023184	Srfbp1	94	60.382	Mus_spretus
ENSODEG00000007258	SRFBP1	100	69.952	ENSMPUG00000013031	SRFBP1	100	70.192	Mustela_putorius_furo
ENSODEG00000007258	SRFBP1	100	69.952	ENSMLUG00000009984	SRFBP1	97	69.952	Myotis_lucifugus
ENSODEG00000007258	SRFBP1	100	64.029	ENSNGAG00000013229	Srfbp1	96	64.029	Nannospalax_galili
ENSODEG00000007258	SRFBP1	100	36.782	ENSNBRG00000001146	-	96	36.854	Neolamprologus_brichardi
ENSODEG00000007258	SRFBP1	100	72.837	ENSNLEG00000011949	SRFBP1	96	72.837	Nomascus_leucogenys
ENSODEG00000007258	SRFBP1	68	63.889	ENSOPRG00000003881	-	82	63.889	Ochotona_princeps
ENSODEG00000007258	SRFBP1	89	44.474	ENSOANG00000010042	-	99	44.211	Ornithorhynchus_anatinus
ENSODEG00000007258	SRFBP1	100	66.106	ENSOCUG00000009556	SRFBP1	96	66.106	Oryctolagus_cuniculus
ENSODEG00000007258	SRFBP1	100	32.996	ENSORLG00000014234	-	85	33.600	Oryzias_latipes
ENSODEG00000007258	SRFBP1	99	34.867	ENSORLG00015000238	-	95	33.735	Oryzias_latipes_hsok
ENSODEG00000007258	SRFBP1	100	68.106	ENSOGAG00000032423	SRFBP1	97	67.866	Otolemur_garnettii
ENSODEG00000007258	SRFBP1	100	72.837	ENSPPAG00000035848	SRFBP1	96	72.837	Pan_paniscus
ENSODEG00000007258	SRFBP1	100	70.192	ENSPPRG00000001695	SRFBP1	96	70.433	Panthera_pardus
ENSODEG00000007258	SRFBP1	100	69.952	ENSPTIG00000012305	SRFBP1	96	70.192	Panthera_tigris_altaica
ENSODEG00000007258	SRFBP1	100	72.837	ENSPTRG00000017172	SRFBP1	96	72.837	Pan_troglodytes
ENSODEG00000007258	SRFBP1	100	70.913	ENSPANG00000003799	SRFBP1	97	72.115	Papio_anubis
ENSODEG00000007258	SRFBP1	100	32.998	ENSPKIG00000024291	-	97	32.998	Paramormyrops_kingsleyae
ENSODEG00000007258	SRFBP1	100	43.560	ENSPSIG00000010650	SRFBP1	97	42.857	Pelodiscus_sinensis
ENSODEG00000007258	SRFBP1	100	36.321	ENSPMGG00000001675	-	96	36.866	Periophthalmus_magnuspinnatus
ENSODEG00000007258	SRFBP1	100	54.286	ENSPCIG00000028532	SRFBP1	91	54.286	Phascolarctos_cinereus
ENSODEG00000007258	SRFBP1	100	37.194	ENSPFOG00000005272	-	85	36.629	Poecilia_formosa
ENSODEG00000007258	SRFBP1	74	64.706	ENSPLAG00000018282	-	86	33.061	Poecilia_latipinna
ENSODEG00000007258	SRFBP1	74	64.706	ENSPMEG00000020184	-	86	31.837	Poecilia_mexicana
ENSODEG00000007258	SRFBP1	99	38.298	ENSPREG00000017248	-	96	38.038	Poecilia_reticulata
ENSODEG00000007258	SRFBP1	100	73.317	ENSPPYG00000015714	SRFBP1	96	73.317	Pongo_abelii
ENSODEG00000007258	SRFBP1	100	71.635	ENSPCOG00000027331	SRFBP1	97	71.635	Propithecus_coquereli
ENSODEG00000007258	SRFBP1	56	77.536	ENSPVAG00000017512	-	55	77.536	Pteropus_vampyrus
ENSODEG00000007258	SRFBP1	100	37.176	ENSPNYG00000010355	-	96	36.512	Pundamilia_nyererei
ENSODEG00000007258	SRFBP1	100	60.952	ENSRNOG00000014808	Srfbp1	94	61.429	Rattus_norvegicus
ENSODEG00000007258	SRFBP1	100	68.825	ENSRBIG00000031064	SRFBP1	99	68.825	Rhinopithecus_bieti
ENSODEG00000007258	SRFBP1	100	72.115	ENSRROG00000026932	SRFBP1	97	72.115	Rhinopithecus_roxellana
ENSODEG00000007258	SRFBP1	100	71.635	ENSSBOG00000015464	-	96	71.635	Saimiri_boliviensis_boliviensis
ENSODEG00000007258	SRFBP1	100	55.000	ENSSHAG00000016003	SRFBP1	96	55.000	Sarcophilus_harrisii
ENSODEG00000007258	SRFBP1	100	36.695	ENSSFOG00015001274	srfbp1	97	36.910	Scleropages_formosus
ENSODEG00000007258	SRFBP1	100	33.733	ENSSMAG00000020630	-	83	32.335	Scophthalmus_maximus
ENSODEG00000007258	SRFBP1	100	64.423	ENSSARG00000010669	SRFBP1	96	65.865	Sorex_araneus
ENSODEG00000007258	SRFBP1	100	42.857	ENSSPUG00000009204	SRFBP1	99	42.857	Sphenodon_punctatus
ENSODEG00000007258	SRFBP1	75	66.667	ENSSPAG00000010728	-	82	34.252	Stegastes_partitus
ENSODEG00000007258	SRFBP1	100	69.952	ENSSSCG00000022656	SRFBP1	96	70.192	Sus_scrofa
ENSODEG00000007258	SRFBP1	100	37.327	ENSTNIG00000009267	-	95	38.128	Tetraodon_nigroviridis
ENSODEG00000007258	SRFBP1	83	76.037	ENSTTRG00000007726	SRFBP1	82	76.037	Tursiops_truncatus
ENSODEG00000007258	SRFBP1	100	70.673	ENSUAMG00000016707	SRFBP1	100	70.913	Ursus_americanus
ENSODEG00000007258	SRFBP1	100	68.765	ENSUMAG00000018340	SRFBP1	96	67.797	Ursus_maritimus
ENSODEG00000007258	SRFBP1	100	69.712	ENSVPAG00000005714	SRFBP1	96	70.673	Vicugna_pacos
ENSODEG00000007258	SRFBP1	100	68.106	ENSVVUG00000019178	SRFBP1	100	67.866	Vulpes_vulpes
ENSODEG00000007258	SRFBP1	100	42.263	ENSXETG00000004681	srfbp1	99	39.957	Xenopus_tropicalis
ENSODEG00000007258	SRFBP1	99	34.082	ENSXCOG00000003410	-	96	35.091	Xiphophorus_couchianus
ENSODEG00000007258	SRFBP1	99	34.082	ENSXMAG00000026251	-	84	32.724	Xiphophorus_maculatus