EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000007296 (Gene tree)
Gene ID: 101563882
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 86310 bases
Position: chrJH651539.1:1889400-1975709
Accession: 101563882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009756	RRM_1	PF00076.22	1.6e-09	1	1
ENSODEP00000009757	RRM_1	PF00076.22	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000009902	SCAF8-202	3816	-	ENSODEP00000009757	1271 (aa)	-	-
ENSODET00000009901	SCAF8-201	4907	XM_012514093	ENSODEP00000009756	1272 (aa)	XP_012369547	UPI000333DE29

Gene Model

Click here to download ENSODEG00000007296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007296's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007296	SCAF8	100	95.679	ENSG00000213079	SCAF8	100	95.679	Homo_sapiens
ENSODEG00000007296	SCAF8	87	68.547	ENSAPOG00000015527	SCAF8	77	68.187	Acanthochromis_polyacanthus
ENSODEG00000007296	SCAF8	100	92.658	ENSAMEG00000007583	SCAF8	97	92.658	Ailuropoda_melanoleuca
ENSODEG00000007296	SCAF8	87	68.547	ENSAOCG00000002421	SCAF8	76	68.187	Amphiprion_ocellaris
ENSODEG00000007296	SCAF8	88	65.505	ENSATEG00000006959	SCAF8	97	64.862	Anabas_testudineus
ENSODEG00000007296	SCAF8	100	78.755	ENSAPLG00000005765	SCAF8	100	78.755	Anas_platyrhynchos
ENSODEG00000007296	SCAF8	99	73.862	ENSACAG00000005282	SCAF8	99	73.783	Anolis_carolinensis
ENSODEG00000007296	SCAF8	100	95.130	ENSANAG00000036184	SCAF8	100	95.130	Aotus_nancymaae
ENSODEG00000007296	SCAF8	86	69.390	ENSACLG00000018828	SCAF8	80	68.987	Astatotilapia_calliptera
ENSODEG00000007296	SCAF8	100	93.323	ENSBTAG00000031917	SCAF8	100	93.323	Bos_taurus
ENSODEG00000007296	SCAF8	100	94.894	ENSCJAG00000012631	SCAF8	97	93.354	Callithrix_jacchus
ENSODEG00000007296	SCAF8	99	94.550	ENSCAFG00000000570	SCAF8	99	94.550	Canis_familiaris
ENSODEG00000007296	SCAF8	99	94.545	ENSCAFG00020015048	SCAF8	99	94.484	Canis_lupus_dingo
ENSODEG00000007296	SCAF8	100	93.323	ENSCHIG00000025041	SCAF8	100	93.323	Capra_hircus
ENSODEG00000007296	SCAF8	99	94.545	ENSTSYG00000010991	SCAF8	97	94.545	Carlito_syrichta
ENSODEG00000007296	SCAF8	75	100.000	ENSCAPG00000003300	SCAF8	97	76.362	Cavia_aperea
ENSODEG00000007296	SCAF8	99	90.442	ENSCPOG00000022216	-	99	89.652	Cavia_porcellus
ENSODEG00000007296	SCAF8	100	94.658	ENSCCAG00000024952	SCAF8	100	94.658	Cebus_capucinus
ENSODEG00000007296	SCAF8	100	95.679	ENSCATG00000035361	SCAF8	100	95.679	Cercocebus_atys
ENSODEG00000007296	SCAF8	100	97.327	ENSCLAG00000004910	SCAF8	100	97.861	Chinchilla_lanigera
ENSODEG00000007296	SCAF8	100	94.127	ENSCSAG00000013430	SCAF8	100	94.127	Chlorocebus_sabaeus
ENSODEG00000007296	SCAF8	100	95.444	ENSCANG00000039499	SCAF8	99	95.408	Colobus_angolensis_palliatus
ENSODEG00000007296	SCAF8	100	91.116	ENSCGRG00001020167	Scaf8	100	91.116	Cricetulus_griseus_chok1gshd
ENSODEG00000007296	SCAF8	99	90.974	ENSCGRG00000004120	Scaf8	99	90.974	Cricetulus_griseus_crigri
ENSODEG00000007296	SCAF8	87	65.904	ENSCSEG00000000043	-	78	67.108	Cynoglossus_semilaevis
ENSODEG00000007296	SCAF8	87	66.710	ENSCVAG00000000925	SCAF8	77	66.186	Cyprinodon_variegatus
ENSODEG00000007296	SCAF8	96	91.646	ENSDNOG00000025271	SCAF8	100	91.646	Dasypus_novemcinctus
ENSODEG00000007296	SCAF8	99	92.514	ENSDORG00000006391	Scaf8	100	92.593	Dipodomys_ordii
ENSODEG00000007296	SCAF8	100	94.270	ENSEASG00005018879	SCAF8	100	94.270	Equus_asinus_asinus
ENSODEG00000007296	SCAF8	100	94.423	ENSECAG00000005540	SCAF8	100	94.423	Equus_caballus
ENSODEG00000007296	SCAF8	86	65.700	ENSELUG00000002779	SCAF8	75	65.217	Esox_lucius
ENSODEG00000007296	SCAF8	100	94.973	ENSFCAG00000023424	SCAF8	100	94.973	Felis_catus
ENSODEG00000007296	SCAF8	100	78.227	ENSFALG00000012433	SCAF8	100	78.399	Ficedula_albicollis
ENSODEG00000007296	SCAF8	99	97.702	ENSFDAG00000010335	SCAF8	99	97.549	Fukomys_damarensis
ENSODEG00000007296	SCAF8	90	68.154	ENSFHEG00000008284	SCAF8	77	67.906	Fundulus_heteroclitus
ENSODEG00000007296	SCAF8	80	56.098	ENSGMOG00000018812	SCAF8	77	60.212	Gadus_morhua
ENSODEG00000007296	SCAF8	99	79.238	ENSGALG00000013635	SCAF8	99	78.849	Gallus_gallus
ENSODEG00000007296	SCAF8	91	68.143	ENSGAFG00000018033	SCAF8	78	64.945	Gambusia_affinis
ENSODEG00000007296	SCAF8	93	53.557	ENSGACG00000006909	SCAF8	100	54.620	Gasterosteus_aculeatus
ENSODEG00000007296	SCAF8	63	72.604	ENSGAGG00000017820	-	88	72.604	Gopherus_agassizii
ENSODEG00000007296	SCAF8	100	95.679	ENSGGOG00000008645	SCAF8	100	95.679	Gorilla_gorilla
ENSODEG00000007296	SCAF8	86	69.268	ENSHBUG00000019537	SCAF8	80	68.864	Haplochromis_burtoni
ENSODEG00000007296	SCAF8	100	97.484	ENSHGLG00000003619	SCAF8	100	97.484	Heterocephalus_glaber_female
ENSODEG00000007296	SCAF8	100	96.855	ENSHGLG00100004708	SCAF8	100	97.464	Heterocephalus_glaber_male
ENSODEG00000007296	SCAF8	99	95.810	ENSSTOG00000026043	SCAF8	99	95.810	Ictidomys_tridecemlineatus
ENSODEG00000007296	SCAF8	100	92.302	ENSJJAG00000020480	Scaf8	100	92.302	Jaculus_jaculus
ENSODEG00000007296	SCAF8	87	67.870	ENSKMAG00000012767	SCAF8	78	67.509	Kryptolebias_marmoratus
ENSODEG00000007296	SCAF8	62	75.556	ENSLBEG00000012484	-	59	75.714	Labrus_bergylta
ENSODEG00000007296	SCAF8	100	61.280	ENSLOCG00000016856	SCAF8	100	60.500	Lepisosteus_oculatus
ENSODEG00000007296	SCAF8	100	91.922	ENSLAFG00000000022	SCAF8	100	92.471	Loxodonta_africana
ENSODEG00000007296	SCAF8	100	95.679	ENSMFAG00000032738	SCAF8	100	95.679	Macaca_fascicularis
ENSODEG00000007296	SCAF8	100	95.679	ENSMMUG00000015163	SCAF8	100	95.679	Macaca_mulatta
ENSODEG00000007296	SCAF8	100	95.679	ENSMNEG00000043466	SCAF8	100	95.679	Macaca_nemestrina
ENSODEG00000007296	SCAF8	99	95.804	ENSMLEG00000034845	SCAF8	99	95.804	Mandrillus_leucophaeus
ENSODEG00000007296	SCAF8	83	65.179	ENSMAMG00000009457	SCAF8	76	64.286	Mastacembelus_armatus
ENSODEG00000007296	SCAF8	86	69.268	ENSMZEG00005005698	SCAF8	80	68.864	Maylandia_zebra
ENSODEG00000007296	SCAF8	99	79.193	ENSMGAG00000012762	SCAF8	100	78.960	Meleagris_gallopavo
ENSODEG00000007296	SCAF8	99	90.254	ENSMAUG00000009513	Scaf8	100	90.254	Mesocricetus_auratus
ENSODEG00000007296	SCAF8	100	93.956	ENSMICG00000028965	SCAF8	100	93.799	Microcebus_murinus
ENSODEG00000007296	SCAF8	100	91.667	ENSMOCG00000014950	Scaf8	100	91.667	Microtus_ochrogaster
ENSODEG00000007296	SCAF8	85	63.659	ENSMMOG00000002216	SCAF8	78	62.670	Mola_mola
ENSODEG00000007296	SCAF8	99	85.478	ENSMODG00000008301	SCAF8	99	85.478	Monodelphis_domestica
ENSODEG00000007296	SCAF8	86	68.613	ENSMALG00000011584	SCAF8	78	68.370	Monopterus_albus
ENSODEG00000007296	SCAF8	100	90.645	MGP_CAROLIEiJ_G0021016	Scaf8	100	90.645	Mus_caroli
ENSODEG00000007296	SCAF8	100	90.723	ENSMUSG00000046201	Scaf8	100	90.723	Mus_musculus
ENSODEG00000007296	SCAF8	100	91.352	MGP_PahariEiJ_G0023334	Scaf8	100	91.352	Mus_pahari
ENSODEG00000007296	SCAF8	100	92.427	ENSMPUG00000001974	SCAF8	100	92.427	Mustela_putorius_furo
ENSODEG00000007296	SCAF8	100	91.438	ENSMLUG00000029190	SCAF8	100	91.438	Myotis_lucifugus
ENSODEG00000007296	SCAF8	100	92.531	ENSNGAG00000012332	Scaf8	100	92.531	Nannospalax_galili
ENSODEG00000007296	SCAF8	95	64.508	ENSNBRG00000009067	SCAF8	100	52.436	Neolamprologus_brichardi
ENSODEG00000007296	SCAF8	100	94.357	ENSNLEG00000015509	SCAF8	99	94.192	Nomascus_leucogenys
ENSODEG00000007296	SCAF8	70	92.857	ENSOPRG00000018413	-	76	93.939	Ochotona_princeps
ENSODEG00000007296	SCAF8	100	55.281	ENSONIG00000008119	SCAF8	99	55.306	Oreochromis_niloticus
ENSODEG00000007296	SCAF8	99	95.178	ENSOCUG00000026063	SCAF8	99	95.178	Oryctolagus_cuniculus
ENSODEG00000007296	SCAF8	86	68.681	ENSORLG00000017358	SCAF8	78	68.681	Oryzias_latipes
ENSODEG00000007296	SCAF8	86	68.804	ENSORLG00020002214	SCAF8	78	68.804	Oryzias_latipes_hni
ENSODEG00000007296	SCAF8	86	69.051	ENSORLG00015015779	SCAF8	78	69.051	Oryzias_latipes_hsok
ENSODEG00000007296	SCAF8	86	68.927	ENSOMEG00000015471	SCAF8	77	68.927	Oryzias_melastigma
ENSODEG00000007296	SCAF8	100	92.813	ENSOGAG00000034223	SCAF8	97	92.813	Otolemur_garnettii
ENSODEG00000007296	SCAF8	99	93.117	ENSOARG00000004159	SCAF8	100	93.117	Ovis_aries
ENSODEG00000007296	SCAF8	100	95.522	ENSPPAG00000039826	SCAF8	100	95.522	Pan_paniscus
ENSODEG00000007296	SCAF8	100	94.973	ENSPPRG00000023175	SCAF8	100	94.973	Panthera_pardus
ENSODEG00000007296	SCAF8	99	94.862	ENSPTIG00000014836	SCAF8	100	94.862	Panthera_tigris_altaica
ENSODEG00000007296	SCAF8	100	95.679	ENSPTRG00000018727	SCAF8	100	95.679	Pan_troglodytes
ENSODEG00000007296	SCAF8	100	95.679	ENSPANG00000017489	SCAF8	100	93.716	Papio_anubis
ENSODEG00000007296	SCAF8	95	72.107	ENSPKIG00000021212	SCAF8	100	71.220	Paramormyrops_kingsleyae
ENSODEG00000007296	SCAF8	89	73.439	ENSPSIG00000008614	SCAF8	94	76.366	Pelodiscus_sinensis
ENSODEG00000007296	SCAF8	99	91.442	ENSPEMG00000010531	Scaf8	100	91.442	Peromyscus_maniculatus_bairdii
ENSODEG00000007296	SCAF8	100	86.431	ENSPCIG00000001141	SCAF8	100	86.431	Phascolarctos_cinereus
ENSODEG00000007296	SCAF8	91	68.804	ENSPFOG00000004176	SCAF8	100	54.691	Poecilia_formosa
ENSODEG00000007296	SCAF8	91	68.681	ENSPLAG00000021432	SCAF8	77	68.187	Poecilia_latipinna
ENSODEG00000007296	SCAF8	91	68.804	ENSPMEG00000007591	SCAF8	84	67.613	Poecilia_mexicana
ENSODEG00000007296	SCAF8	85	68.681	ENSPREG00000000652	SCAF8	77	68.187	Poecilia_reticulata
ENSODEG00000007296	SCAF8	100	94.039	ENSPPYG00000017121	SCAF8	100	93.725	Pongo_abelii
ENSODEG00000007296	SCAF8	85	96.817	ENSPCAG00000013044	SCAF8	90	96.817	Procavia_capensis
ENSODEG00000007296	SCAF8	100	94.427	ENSPCOG00000002067	SCAF8	99	94.225	Propithecus_coquereli
ENSODEG00000007296	SCAF8	98	90.662	ENSPVAG00000005582	SCAF8	100	91.780	Pteropus_vampyrus
ENSODEG00000007296	SCAF8	86	69.390	ENSPNYG00000007277	SCAF8	80	68.987	Pundamilia_nyererei
ENSODEG00000007296	SCAF8	86	68.054	ENSPNAG00000024740	SCAF8	82	68.299	Pygocentrus_nattereri
ENSODEG00000007296	SCAF8	100	90.802	ENSRNOG00000016919	Scaf8	100	90.802	Rattus_norvegicus
ENSODEG00000007296	SCAF8	100	95.444	ENSRBIG00000035769	SCAF8	100	95.444	Rhinopithecus_bieti
ENSODEG00000007296	SCAF8	100	95.365	ENSRROG00000013580	SCAF8	100	95.365	Rhinopithecus_roxellana
ENSODEG00000007296	SCAF8	100	94.737	ENSSBOG00000027023	SCAF8	100	94.737	Saimiri_boliviensis_boliviensis
ENSODEG00000007296	SCAF8	100	85.815	ENSSHAG00000009915	SCAF8	100	85.815	Sarcophilus_harrisii
ENSODEG00000007296	SCAF8	100	54.510	ENSSFOG00015009481	SCAF8	93	68.421	Scleropages_formosus
ENSODEG00000007296	SCAF8	87	68.029	ENSSMAG00000008275	SCAF8	77	67.428	Scophthalmus_maximus
ENSODEG00000007296	SCAF8	100	76.940	ENSSPUG00000015219	SCAF8	100	76.923	Sphenodon_punctatus
ENSODEG00000007296	SCAF8	100	94.108	ENSSSCG00000004070	SCAF8	100	94.108	Sus_scrofa
ENSODEG00000007296	SCAF8	99	79.513	ENSTGUG00000011151	SCAF8	100	79.749	Taeniopygia_guttata
ENSODEG00000007296	SCAF8	85	67.571	ENSTRUG00000009243	SCAF8	78	67.571	Takifugu_rubripes
ENSODEG00000007296	SCAF8	55	39.825	ENSTNIG00000009945	scaf4a	51	53.793	Tetraodon_nigroviridis
ENSODEG00000007296	SCAF8	91	69.100	ENSTNIG00000016885	SCAF8	99	69.231	Tetraodon_nigroviridis
ENSODEG00000007296	SCAF8	99	93.824	ENSTTRG00000014538	SCAF8	100	93.824	Tursiops_truncatus
ENSODEG00000007296	SCAF8	100	94.187	ENSUAMG00000024736	SCAF8	99	94.141	Ursus_americanus
ENSODEG00000007296	SCAF8	98	94.151	ENSUMAG00000013404	SCAF8	100	94.151	Ursus_maritimus
ENSODEG00000007296	SCAF8	67	81.744	ENSVPAG00000012465	SCAF8	99	83.603	Vicugna_pacos
ENSODEG00000007296	SCAF8	99	94.625	ENSVVUG00000007532	SCAF8	100	94.631	Vulpes_vulpes
ENSODEG00000007296	SCAF8	100	60.806	ENSXETG00000013132	scaf8	100	60.822	Xenopus_tropicalis
ENSODEG00000007296	SCAF8	91	68.557	ENSXMAG00000019192	SCAF8	78	68.187	Xiphophorus_maculatus