EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000007383 (Gene tree)
Gene ID
101591973
Gene Symbol
-
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Plus strand
Length
78580 bases
Position
chrJH651655.1:3378109-3456688
Accession
101591973
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000009868CSDPF00313.224.2e-8515
ENSODEP00000009868CSDPF00313.224.2e-8525
ENSODEP00000009868CSDPF00313.224.2e-8535
ENSODEP00000009868CSDPF00313.224.2e-8545
ENSODEP00000009868CSDPF00313.224.2e-8555
ENSODEP00000009867CSDPF00313.221.2e-6814
ENSODEP00000009867CSDPF00313.221.2e-6824
ENSODEP00000009867CSDPF00313.221.2e-6834
ENSODEP00000009867CSDPF00313.221.2e-6844
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000010014-3819XM_004641676ENSODEP00000009867668 (aa)XP_004641733UPI00033397A4
ENSODET00000010015-3651XM_004641671ENSODEP00000009868798 (aa)XP_004641728UPI0003336CC0
Gene Model
Click here to download ENSODEG00000007383's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007383's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000007383-9868.363ENSODEG00000005979-9868.363
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000007383-10098.952ENSG00000009307CSDE1100100.000Homo_sapiens
ENSODEG00000007383-10076.453ENSAPOG00000015538csde19976.453Acanthochromis_polyacanthus
ENSODEG00000007383-10097.305ENSAMEG00000017129CSDE19397.305Ailuropoda_melanoleuca
ENSODEG00000007383-9175.946ENSACIG00000015175csde110075.946Amphilophus_citrinellus
ENSODEG00000007383-10076.453ENSAOCG00000011510csde19976.453Amphiprion_ocellaris
ENSODEG00000007383-10076.904ENSAPEG00000007194csde19976.612Amphiprion_percula
ENSODEG00000007383-10076.006ENSATEG00000003864csde19976.006Anabas_testudineus
ENSODEG00000007383-10090.569ENSAPLG00000008797CSDE19990.569Anas_platyrhynchos
ENSODEG00000007383-10091.855ENSACAG00000003120CSDE110091.855Anolis_carolinensis
ENSODEG00000007383-9273.050ENSANAG00000028396-9173.810Aotus_nancymaae
ENSODEG00000007383-10098.653ENSANAG00000024665CSDE19598.653Aotus_nancymaae
ENSODEG00000007383-10076.375ENSACLG00000013296csde110076.375Astatotilapia_calliptera
ENSODEG00000007383-10075.595ENSAMXG00000007436csde110073.566Astyanax_mexicanus
ENSODEG00000007383-10097.995ENSBTAG00000000678CSDE19997.904Bos_taurus
ENSODEG00000007383-10098.653ENSCJAG00000012565CSDE19598.622Callithrix_jacchus
ENSODEG00000007383-9898.622ENSCAFG00000009618CSDE19398.622Canis_familiaris
ENSODEG00000007383-10098.653ENSCAFG00020000481CSDE19998.653Canis_lupus_dingo
ENSODEG00000007383-10097.995ENSCHIG00000017250CSDE19997.904Capra_hircus
ENSODEG00000007383-10097.995ENSTSYG00000003747CSDE110097.995Carlito_syrichta
ENSODEG00000007383-10092.398ENSCAPG00000015128CSDE110092.398Cavia_aperea
ENSODEG00000007383-9995.030ENSCPOG00000040388CSDE19995.030Cavia_porcellus
ENSODEG00000007383-10098.653ENSCCAG00000036794CSDE110098.622Cebus_capucinus
ENSODEG00000007383-9676.485ENSCCAG00000033677-9976.010Cebus_capucinus
ENSODEG00000007383-9973.719ENSCCAG00000030878-9173.719Cebus_capucinus
ENSODEG00000007383-10098.952ENSCATG00000036962CSDE19898.812Cercocebus_atys
ENSODEG00000007383-10099.123ENSCLAG00000006618CSDE110099.123Chinchilla_lanigera
ENSODEG00000007383-10098.872ENSCSAG00000001658CSDE19598.872Chlorocebus_sabaeus
ENSODEG00000007383-10097.853ENSCHOG00000000918CSDE18597.853Choloepus_hoffmanni
ENSODEG00000007383-10091.855ENSCPBG00000016547CSDE110091.855Chrysemys_picta_bellii
ENSODEG00000007383-9841.823ENSCING00000014465-9642.421Ciona_intestinalis
ENSODEG00000007383-9741.124ENSCSAVG00000008100-9842.007Ciona_savignyi
ENSODEG00000007383-10093.053ENSCANG00000031069-10093.053Colobus_angolensis_palliatus
ENSODEG00000007383-10098.952ENSCANG00000035096CSDE19898.812Colobus_angolensis_palliatus
ENSODEG00000007383-10079.491ENSCGRG00001014011-10078.195Cricetulus_griseus_chok1gshd
ENSODEG00000007383-10098.246ENSCGRG00001016833-10098.246Cricetulus_griseus_chok1gshd
ENSODEG00000007383-9997.550ENSCGRG00000002225-10097.550Cricetulus_griseus_crigri
ENSODEG00000007383-10079.389ENSCGRG00000005831-9979.389Cricetulus_griseus_crigri
ENSODEG00000007383-10076.418ENSCSEG00000002620csde110074.125Cynoglossus_semilaevis
ENSODEG00000007383-10076.125ENSCVAG00000001344csde110075.776Cyprinodon_variegatus
ENSODEG00000007383-10077.278ENSDARG00000074758csde19884.252Danio_rerio
ENSODEG00000007383-10097.907ENSDNOG00000010287-9297.907Dasypus_novemcinctus
ENSODEG00000007383-10097.744ENSDORG00000011609Csde110097.744Dipodomys_ordii
ENSODEG00000007383-9747.382FBgn0263352Unr8148.394Drosophila_melanogaster
ENSODEG00000007383-10077.096ENSETEG00000013678-9777.096Echinops_telfairi
ENSODEG00000007383-9068.046ENSETEG00000007109-9968.046Echinops_telfairi
ENSODEG00000007383-9397.521ENSETEG00000002491-7497.521Echinops_telfairi
ENSODEG00000007383-8985.553ENSETEG00000006280-9985.553Echinops_telfairi
ENSODEG00000007383-9957.185ENSEBUG00000008647csde19954.048Eptatretus_burgeri
ENSODEG00000007383-10098.353ENSEASG00005006284CSDE110098.246Equus_asinus_asinus
ENSODEG00000007383-10098.353ENSECAG00000020885CSDE110098.246Equus_caballus
ENSODEG00000007383-9299.476ENSEEUG00000006286CSDE16899.476Erinaceus_europaeus
ENSODEG00000007383-10074.481ENSELUG00000015507csde19974.481Esox_lucius
ENSODEG00000007383-10098.653ENSFCAG00000029266CSDE19998.653Felis_catus
ENSODEG00000007383-10091.980ENSFALG00000003407CSDE110091.980Ficedula_albicollis
ENSODEG00000007383-10098.997ENSFDAG00000007882CSDE110098.997Fukomys_damarensis
ENSODEG00000007383-10076.280ENSFHEG00000010799csde110076.280Fundulus_heteroclitus
ENSODEG00000007383-9976.345ENSGMOG00000012731csde110076.345Gadus_morhua
ENSODEG00000007383-9891.560ENSGALG00000002139CSDE19891.560Gallus_gallus
ENSODEG00000007383-9174.686ENSGAFG00000005241csde19474.686Gambusia_affinis
ENSODEG00000007383-9977.375ENSGACG00000004544csde110077.375Gasterosteus_aculeatus
ENSODEG00000007383-10091.479ENSGAGG00000017685CSDE110091.479Gopherus_agassizii
ENSODEG00000007383-10098.952ENSGGOG00000002164CSDE19998.952Gorilla_gorilla
ENSODEG00000007383-10075.970ENSHBUG00000020315csde19975.970Haplochromis_burtoni
ENSODEG00000007383-10088.024ENSHGLG00000003829-9988.024Heterocephalus_glaber_female
ENSODEG00000007383-10089.474ENSHGLG00000009620-10089.724Heterocephalus_glaber_female
ENSODEG00000007383-9985.866ENSHGLG00000007471-9785.866Heterocephalus_glaber_female
ENSODEG00000007383-9980.176ENSHGLG00000000650-9980.176Heterocephalus_glaber_female
ENSODEG00000007383-10082.456ENSHGLG00000019549-10082.456Heterocephalus_glaber_female
ENSODEG00000007383-10089.222ENSHGLG00000008555-10089.222Heterocephalus_glaber_female
ENSODEG00000007383-9989.532ENSHGLG00000010039-10089.532Heterocephalus_glaber_female
ENSODEG00000007383-9384.304ENSHGLG00100004195-9984.304Heterocephalus_glaber_male
ENSODEG00000007383-9982.827ENSHGLG00100007287-9782.827Heterocephalus_glaber_male
ENSODEG00000007383-9984.606ENSHGLG00100002245-9984.606Heterocephalus_glaber_male
ENSODEG00000007383-9989.310ENSHGLG00100006910-10089.310Heterocephalus_glaber_male
ENSODEG00000007383-9881.737ENSHGLG00100004833-10081.737Heterocephalus_glaber_male
ENSODEG00000007383-10099.123ENSHGLG00100019438-10099.123Heterocephalus_glaber_male
ENSODEG00000007383-10082.485ENSHGLG00100012072-10082.287Heterocephalus_glaber_male
ENSODEG00000007383-10078.774ENSHGLG00100001846-9978.774Heterocephalus_glaber_male
ENSODEG00000007383-10075.500ENSHCOG00000004158csde19975.075Hippocampus_comes
ENSODEG00000007383-10076.488ENSIPUG00000000355csde110073.691Ictalurus_punctatus
ENSODEG00000007383-9982.380ENSSTOG00000030994-10079.777Ictidomys_tridecemlineatus
ENSODEG00000007383-8682.056ENSSTOG00000032722-9882.056Ictidomys_tridecemlineatus
ENSODEG00000007383-10097.995ENSJJAG00000019571Csde110097.995Jaculus_jaculus
ENSODEG00000007383-10076.025ENSKMAG00000005685csde110075.649Kryptolebias_marmoratus
ENSODEG00000007383-10076.453ENSLBEG00000014770csde19976.453Labrus_bergylta
ENSODEG00000007383-10079.653ENSLACG00000018452CSDE19479.653Latimeria_chalumnae
ENSODEG00000007383-10079.599ENSLOCG00000010413csde19479.599Lepisosteus_oculatus
ENSODEG00000007383-10096.856ENSLAFG00000007150CSDE19596.856Loxodonta_africana
ENSODEG00000007383-10098.952ENSMFAG00000003674CSDE19998.952Macaca_fascicularis
ENSODEG00000007383-10098.952ENSMMUG00000001974CSDE19998.952Macaca_mulatta
ENSODEG00000007383-10098.952ENSMNEG00000045247CSDE19898.812Macaca_nemestrina
ENSODEG00000007383-10098.653ENSMLEG00000038673CSDE19598.622Mandrillus_leucophaeus
ENSODEG00000007383-9977.130ENSMAMG00000008821csde19977.130Mastacembelus_armatus
ENSODEG00000007383-10076.375ENSMZEG00005021675csde19975.970Maylandia_zebra
ENSODEG00000007383-10090.284ENSMGAG00000016381CSDE19891.432Meleagris_gallopavo
ENSODEG00000007383-10098.246ENSMAUG00000014031Csde110098.246Mesocricetus_auratus
ENSODEG00000007383-10098.204ENSMICG00000002050CSDE19998.214Microcebus_murinus
ENSODEG00000007383-10098.246ENSMOCG00000018960Csde110098.246Microtus_ochrogaster
ENSODEG00000007383-10076.155ENSMMOG00000015075csde110074.032Mola_mola
ENSODEG00000007383-10095.489ENSMODG00000004685CSDE110095.489Monodelphis_domestica
ENSODEG00000007383-10076.602ENSMALG00000007132csde110074.282Monopterus_albus
ENSODEG00000007383-10097.995MGP_CAROLIEiJ_G0025444Csde110097.995Mus_caroli
ENSODEG00000007383-10098.120ENSMUSG00000068823Csde110098.120Mus_musculus
ENSODEG00000007383-10098.371MGP_PahariEiJ_G0026888Csde110098.371Mus_pahari
ENSODEG00000007383-10098.371MGP_SPRETEiJ_G0026394Csde110098.371Mus_spretus
ENSODEG00000007383-9898.467ENSMPUG00000005753CSDE19998.613Mustela_putorius_furo
ENSODEG00000007383-10097.754ENSMLUG00000005681CSDE19497.754Myotis_lucifugus
ENSODEG00000007383-10098.496ENSNGAG00000021929Csde110098.496Nannospalax_galili
ENSODEG00000007383-9970.824ENSNGAG00000012599-10070.824Nannospalax_galili
ENSODEG00000007383-10075.970ENSNBRG00000020808csde19975.970Neolamprologus_brichardi
ENSODEG00000007383-10098.802ENSNLEG00000004842CSDE19698.802Nomascus_leucogenys
ENSODEG00000007383-9895.292ENSMEUG00000002677CSDE19695.292Notamacropus_eugenii
ENSODEG00000007383-9897.087ENSOPRG00000005002CSDE17697.087Ochotona_princeps
ENSODEG00000007383-9976.126ENSONIG00000009309csde19976.126Oreochromis_niloticus
ENSODEG00000007383-10079.302ENSOANG00000003346-10079.302Ornithorhynchus_anatinus
ENSODEG00000007383-10097.754ENSOCUG00000016438CSDE19597.744Oryctolagus_cuniculus
ENSODEG00000007383-10076.119ENSORLG00000000707csde19976.126Oryzias_latipes
ENSODEG00000007383-10076.375ENSORLG00020005148csde19976.126Oryzias_latipes_hni
ENSODEG00000007383-10076.375ENSORLG00015019415csde19976.126Oryzias_latipes_hsok
ENSODEG00000007383-10077.278ENSOMEG00000015656csde110075.488Oryzias_melastigma
ENSODEG00000007383-10098.802ENSOGAG00000012127CSDE19498.802Otolemur_garnettii
ENSODEG00000007383-10098.054ENSOARG00000020034CSDE19498.054Ovis_aries
ENSODEG00000007383-10098.952ENSPPAG00000025861CSDE19998.952Pan_paniscus
ENSODEG00000007383-10098.653ENSPPRG00000006747CSDE19598.496Panthera_pardus
ENSODEG00000007383-10098.653ENSPTIG00000015468CSDE110098.496Panthera_tigris_altaica
ENSODEG00000007383-10098.952ENSPTRG00000033721CSDE110098.872Pan_troglodytes
ENSODEG00000007383-10098.952ENSPANG00000018873CSDE19998.952Papio_anubis
ENSODEG00000007383-10076.119ENSPKIG00000009459csde110073.750Paramormyrops_kingsleyae
ENSODEG00000007383-9694.690ENSPSIG00000003823CSDE19694.690Pelodiscus_sinensis
ENSODEG00000007383-10075.857ENSPMGG00000000772csde19975.857Periophthalmus_magnuspinnatus
ENSODEG00000007383-10098.246ENSPEMG00000020357-10098.246Peromyscus_maniculatus_bairdii
ENSODEG00000007383-10095.614ENSPCIG00000022587CSDE110095.614Phascolarctos_cinereus
ENSODEG00000007383-9975.529ENSPFOG00000012664csde110075.466Poecilia_formosa
ENSODEG00000007383-9771.121ENSPLAG00000017680csde19371.121Poecilia_latipinna
ENSODEG00000007383-9871.017ENSPMEG00000005094csde19671.017Poecilia_mexicana
ENSODEG00000007383-10075.622ENSPREG00000011631csde110073.469Poecilia_reticulata
ENSODEG00000007383-10098.747ENSPPYG00000000996CSDE110098.747Pongo_abelii
ENSODEG00000007383-10097.781ENSPCAG00000014368CSDE19097.781Procavia_capensis
ENSODEG00000007383-10098.802ENSPCOG00000017893CSDE110098.496Propithecus_coquereli
ENSODEG00000007383-9084.701ENSPCOG00000008223-9283.212Propithecus_coquereli
ENSODEG00000007383-10091.617ENSPVAG00000008225CSDE19491.617Pteropus_vampyrus
ENSODEG00000007383-10075.970ENSPNYG00000013745csde19975.970Pundamilia_nyererei
ENSODEG00000007383-10076.779ENSPNAG00000001958csde110074.157Pygocentrus_nattereri
ENSODEG00000007383-10098.246ENSRNOG00000061058Csde110098.246Rattus_norvegicus
ENSODEG00000007383-9997.005ENSRBIG00000038088-9997.005Rhinopithecus_bieti
ENSODEG00000007383-10093.116ENSRBIG00000038966-9493.116Rhinopithecus_bieti
ENSODEG00000007383-10098.952ENSRROG00000043101CSDE19898.578Rhinopithecus_roxellana
ENSODEG00000007383-10098.653ENSSBOG00000035592CSDE19598.622Saimiri_boliviensis_boliviensis
ENSODEG00000007383-10095.210ENSSHAG00000009831CSDE19995.210Sarcophilus_harrisii
ENSODEG00000007383-10076.418ENSSFOG00015007498csde110076.493Scleropages_formosus
ENSODEG00000007383-10077.049ENSSMAG00000007203csde19977.211Scophthalmus_maximus
ENSODEG00000007383-10076.304ENSSDUG00000015380csde19976.304Seriola_dumerili
ENSODEG00000007383-10076.654ENSSLDG00000008819csde110076.654Seriola_lalandi_dorsalis
ENSODEG00000007383-10097.305ENSSARG00000000738CSDE19397.305Sorex_araneus
ENSODEG00000007383-10091.228ENSSPUG00000008714CSDE110091.228Sphenodon_punctatus
ENSODEG00000007383-10076.779ENSSPAG00000000716csde19976.304Stegastes_partitus
ENSODEG00000007383-10098.503ENSSSCG00000006752CSDE19998.503Sus_scrofa
ENSODEG00000007383-10091.000ENSTGUG00000000972CSDE110091.000Taeniopygia_guttata
ENSODEG00000007383-10073.433ENSTRUG00000007996csde19973.433Takifugu_rubripes
ENSODEG00000007383-9183.721ENSTNIG00000010878csde19883.721Tetraodon_nigroviridis
ENSODEG00000007383-9398.718ENSTBEG00000011880-61100.000Tupaia_belangeri
ENSODEG00000007383-10097.605ENSTTRG00000015583CSDE19497.605Tursiops_truncatus
ENSODEG00000007383-8998.697ENSUAMG00000021779-10098.071Ursus_americanus
ENSODEG00000007383-8993.814ENSUAMG00000024289-9989.110Ursus_americanus
ENSODEG00000007383-10092.216ENSUMAG00000009720-9492.216Ursus_maritimus
ENSODEG00000007383-9998.337ENSUMAG00000011714-9998.337Ursus_maritimus
ENSODEG00000007383-10098.592ENSVPAG00000000749CSDE17998.592Vicugna_pacos
ENSODEG00000007383-9198.364ENSVVUG00000009890CSDE19498.246Vulpes_vulpes
ENSODEG00000007383-10085.518ENSXETG00000021448csde110085.518Xenopus_tropicalis
ENSODEG00000007383-9285.455ENSXCOG00000000035csde19985.455Xiphophorus_couchianus
ENSODEG00000007383-10076.875ENSXMAG00000009080csde19976.006Xiphophorus_maculatus

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