EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000007401 (Gene tree)
Gene ID: 101576958
Gene Symbol: YRDC
Alias: -
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 3751 bases
Position: chrJH651645.1:5593179-5596929
Accession: 101576958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000009895	Sua5_yciO_yrdC	PF01300.18	4.7e-44	1	1
ENSODEP00000009896	Sua5_yciO_yrdC	PF01300.18	5.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010043	YRDC-202	903	-	ENSODEP00000009896	105 (aa)	-	-
ENSODET00000010042	YRDC-201	840	XM_004641100	ENSODEP00000009895	279 (aa)	XP_023556779	UPI000C9FC654

Gene Model

Click here to download ENSODEG00000007401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007401	YRDC	100	89.524	ENSG00000196449	YRDC	99	87.410	Homo_sapiens
ENSODEG00000007401	YRDC	100	68.571	ENSAPOG00000024293	yrdc	89	58.298	Acanthochromis_polyacanthus
ENSODEG00000007401	YRDC	100	86.667	ENSAMEG00000001173	YRDC	99	88.770	Ailuropoda_melanoleuca
ENSODEG00000007401	YRDC	100	69.524	ENSACIG00000017330	yrdc	86	58.974	Amphilophus_citrinellus
ENSODEG00000007401	YRDC	100	68.571	ENSAOCG00000021647	yrdc	89	58.650	Amphiprion_ocellaris
ENSODEG00000007401	YRDC	100	68.571	ENSAPEG00000006164	yrdc	89	58.228	Amphiprion_percula
ENSODEG00000007401	YRDC	100	68.571	ENSATEG00000010086	yrdc	82	61.261	Anabas_testudineus
ENSODEG00000007401	YRDC	100	72.381	ENSACAG00000017203	YRDC	99	63.810	Anolis_carolinensis
ENSODEG00000007401	YRDC	100	83.810	ENSANAG00000031052	-	94	82.308	Aotus_nancymaae
ENSODEG00000007401	YRDC	100	90.476	ENSANAG00000028788	-	97	83.550	Aotus_nancymaae
ENSODEG00000007401	YRDC	99	70.192	ENSACLG00000027775	yrdc	84	59.471	Astatotilapia_calliptera
ENSODEG00000007401	YRDC	100	67.619	ENSAMXG00000037791	yrdc	85	60.000	Astyanax_mexicanus
ENSODEG00000007401	YRDC	100	92.381	ENSBTAG00000006510	YRDC	99	88.448	Bos_taurus
ENSODEG00000007401	YRDC	100	39.623	WBGene00012997	Y48C3A.18	97	37.500	Caenorhabditis_elegans
ENSODEG00000007401	YRDC	100	89.524	ENSCJAG00000002078	YRDC	76	87.410	Callithrix_jacchus
ENSODEG00000007401	YRDC	100	83.810	ENSCAFG00000003253	YRDC	99	79.286	Canis_familiaris
ENSODEG00000007401	YRDC	100	83.810	ENSCAFG00020007843	YRDC	99	81.429	Canis_lupus_dingo
ENSODEG00000007401	YRDC	100	89.524	ENSCHIG00000007882	YRDC	99	87.365	Capra_hircus
ENSODEG00000007401	YRDC	100	87.619	ENSTSYG00000005555	YRDC	64	86.517	Carlito_syrichta
ENSODEG00000007401	YRDC	100	90.476	ENSCPOG00000036144	YRDC	100	90.323	Cavia_porcellus
ENSODEG00000007401	YRDC	100	89.524	ENSCCAG00000028891	YRDC	99	87.050	Cebus_capucinus
ENSODEG00000007401	YRDC	100	87.619	ENSCATG00000036928	YRDC	99	86.331	Cercocebus_atys
ENSODEG00000007401	YRDC	100	92.473	ENSCLAG00000015012	YRDC	100	92.473	Chinchilla_lanigera
ENSODEG00000007401	YRDC	100	87.619	ENSCSAG00000001116	YRDC	99	86.331	Chlorocebus_sabaeus
ENSODEG00000007401	YRDC	75	83.732	ENSCHOG00000005500	YRDC	100	83.732	Choloepus_hoffmanni
ENSODEG00000007401	YRDC	100	73.333	ENSCPBG00000018446	YRDC	88	67.150	Chrysemys_picta_bellii
ENSODEG00000007401	YRDC	99	49.541	ENSCING00000007564	-	98	47.418	Ciona_intestinalis
ENSODEG00000007401	YRDC	99	50.459	ENSCSAVG00000009982	-	98	48.341	Ciona_savignyi
ENSODEG00000007401	YRDC	100	88.571	ENSCANG00000031111	YRDC	99	86.691	Colobus_angolensis_palliatus
ENSODEG00000007401	YRDC	100	89.524	ENSCGRG00001014496	-	100	85.000	Cricetulus_griseus_chok1gshd
ENSODEG00000007401	YRDC	100	86.667	ENSCGRG00001000829	-	77	78.700	Cricetulus_griseus_chok1gshd
ENSODEG00000007401	YRDC	100	89.524	ENSCGRG00000001307	-	100	85.039	Cricetulus_griseus_crigri
ENSODEG00000007401	YRDC	100	68.571	ENSCSEG00000019075	yrdc	74	62.745	Cynoglossus_semilaevis
ENSODEG00000007401	YRDC	100	64.762	ENSCVAG00000017355	yrdc	92	54.618	Cyprinodon_variegatus
ENSODEG00000007401	YRDC	100	63.810	ENSDARG00000041428	yrdc	97	56.897	Danio_rerio
ENSODEG00000007401	YRDC	100	88.571	ENSDNOG00000038789	-	100	87.500	Dasypus_novemcinctus
ENSODEG00000007401	YRDC	100	63.551	ENSDNOG00000036198	-	97	61.000	Dasypus_novemcinctus
ENSODEG00000007401	YRDC	100	90.476	ENSDORG00000008788	Yrdc	100	69.643	Dipodomys_ordii
ENSODEG00000007401	YRDC	100	52.336	FBgn0061361	CG33786	81	47.783	Drosophila_melanogaster
ENSODEG00000007401	YRDC	99	71.480	ENSETEG00000003442	YRDC	99	71.480	Echinops_telfairi
ENSODEG00000007401	YRDC	99	56.731	ENSEBUG00000014080	yrdc	95	50.435	Eptatretus_burgeri
ENSODEG00000007401	YRDC	100	89.524	ENSEASG00005012253	YRDC	99	87.770	Equus_asinus_asinus
ENSODEG00000007401	YRDC	100	89.524	ENSECAG00000022522	YRDC	99	88.129	Equus_caballus
ENSODEG00000007401	YRDC	100	71.429	ENSELUG00000018071	yrdc	71	61.927	Esox_lucius
ENSODEG00000007401	YRDC	100	87.619	ENSFCAG00000011018	YRDC	99	88.489	Felis_catus
ENSODEG00000007401	YRDC	100	78.095	ENSFALG00000000964	YRDC	89	69.744	Ficedula_albicollis
ENSODEG00000007401	YRDC	72	30.045	ENSFALG00000011333	-	55	30.415	Ficedula_albicollis
ENSODEG00000007401	YRDC	100	94.286	ENSFDAG00000016507	-	100	94.286	Fukomys_damarensis
ENSODEG00000007401	YRDC	100	66.667	ENSFHEG00000001029	yrdc	84	57.746	Fundulus_heteroclitus
ENSODEG00000007401	YRDC	100	69.524	ENSGMOG00000015635	yrdc	97	64.216	Gadus_morhua
ENSODEG00000007401	YRDC	100	78.095	ENSGALG00000029001	YRDC	87	69.163	Gallus_gallus
ENSODEG00000007401	YRDC	70	30.415	ENSGALG00000025899	-	69	30.876	Gallus_gallus
ENSODEG00000007401	YRDC	100	63.810	ENSGAFG00000008396	yrdc	84	57.018	Gambusia_affinis
ENSODEG00000007401	YRDC	100	65.714	ENSGACG00000013878	yrdc	95	57.576	Gasterosteus_aculeatus
ENSODEG00000007401	YRDC	100	75.238	ENSGAGG00000014968	YRDC	97	66.518	Gopherus_agassizii
ENSODEG00000007401	YRDC	100	89.524	ENSGGOG00000007619	YRDC	99	87.410	Gorilla_gorilla
ENSODEG00000007401	YRDC	99	71.154	ENSHBUG00000009298	yrdc	84	59.912	Haplochromis_burtoni
ENSODEG00000007401	YRDC	100	93.333	ENSHGLG00000014075	YRDC	100	91.756	Heterocephalus_glaber_female
ENSODEG00000007401	YRDC	100	93.333	ENSHGLG00100002734	YRDC	100	80.645	Heterocephalus_glaber_male
ENSODEG00000007401	YRDC	100	62.857	ENSHCOG00000006598	yrdc	88	57.522	Hippocampus_comes
ENSODEG00000007401	YRDC	100	66.667	ENSIPUG00000014985	yrdc	92	60.793	Ictalurus_punctatus
ENSODEG00000007401	YRDC	100	90.476	ENSSTOG00000001643	YRDC	99	89.568	Ictidomys_tridecemlineatus
ENSODEG00000007401	YRDC	100	92.381	ENSJJAG00000023117	-	100	92.381	Jaculus_jaculus
ENSODEG00000007401	YRDC	99	70.192	ENSKMAG00000013468	yrdc	86	59.657	Kryptolebias_marmoratus
ENSODEG00000007401	YRDC	100	70.476	ENSLBEG00000027501	yrdc	96	54.789	Labrus_bergylta
ENSODEG00000007401	YRDC	100	73.333	ENSLACG00000010689	YRDC	99	63.721	Latimeria_chalumnae
ENSODEG00000007401	YRDC	68	31.754	ENSLACG00000017624	si:ch211-153b23.3	61	31.754	Latimeria_chalumnae
ENSODEG00000007401	YRDC	100	71.429	ENSLOCG00000003321	yrdc	88	63.256	Lepisosteus_oculatus
ENSODEG00000007401	YRDC	100	86.667	ENSLAFG00000017556	YRDC	99	86.232	Loxodonta_africana
ENSODEG00000007401	YRDC	100	87.619	ENSMFAG00000003487	YRDC	99	88.095	Macaca_fascicularis
ENSODEG00000007401	YRDC	100	87.619	ENSMMUG00000005372	YRDC	74	86.331	Macaca_mulatta
ENSODEG00000007401	YRDC	100	87.619	ENSMNEG00000029348	YRDC	99	86.331	Macaca_nemestrina
ENSODEG00000007401	YRDC	100	87.619	ENSMLEG00000041122	YRDC	99	85.906	Mandrillus_leucophaeus
ENSODEG00000007401	YRDC	100	66.667	ENSMAMG00000007315	yrdc	83	61.233	Mastacembelus_armatus
ENSODEG00000007401	YRDC	99	70.192	ENSMZEG00005006948	yrdc	84	59.471	Maylandia_zebra
ENSODEG00000007401	YRDC	70	30.415	ENSMGAG00000005489	-	55	30.876	Meleagris_gallopavo
ENSODEG00000007401	YRDC	100	78.095	ENSMGAG00000002833	YRDC	99	70.792	Meleagris_gallopavo
ENSODEG00000007401	YRDC	100	90.476	ENSMAUG00000003715	-	100	90.476	Mesocricetus_auratus
ENSODEG00000007401	YRDC	100	90.476	ENSMICG00000031688	YRDC	99	88.129	Microcebus_murinus
ENSODEG00000007401	YRDC	75	86.124	ENSMOCG00000000164	-	81	86.124	Microtus_ochrogaster
ENSODEG00000007401	YRDC	100	67.619	ENSMMOG00000002119	yrdc	86	58.547	Mola_mola
ENSODEG00000007401	YRDC	100	85.714	ENSMODG00000017750	YRDC	99	69.366	Monodelphis_domestica
ENSODEG00000007401	YRDC	100	70.476	ENSMALG00000012471	yrdc	85	60.793	Monopterus_albus
ENSODEG00000007401	YRDC	98	93.204	MGP_CAROLIEiJ_G0026453	Yrdc	98	93.204	Mus_caroli
ENSODEG00000007401	YRDC	100	92.381	ENSMUSG00000028889	Yrdc	100	92.381	Mus_musculus
ENSODEG00000007401	YRDC	100	91.429	MGP_PahariEiJ_G0028784	Yrdc	100	91.429	Mus_pahari
ENSODEG00000007401	YRDC	100	92.381	MGP_SPRETEiJ_G0027432	Yrdc	100	85.000	Mus_spretus
ENSODEG00000007401	YRDC	100	85.714	ENSMPUG00000014542	YRDC	87	86.239	Mustela_putorius_furo
ENSODEG00000007401	YRDC	100	82.857	ENSMLUG00000024310	-	96	78.462	Myotis_lucifugus
ENSODEG00000007401	YRDC	100	87.619	ENSMLUG00000000955	-	98	85.036	Myotis_lucifugus
ENSODEG00000007401	YRDC	100	74.286	ENSMLUG00000028796	-	97	62.774	Myotis_lucifugus
ENSODEG00000007401	YRDC	100	90.476	ENSNGAG00000019099	Yrdc	100	81.429	Nannospalax_galili
ENSODEG00000007401	YRDC	99	71.154	ENSNBRG00000009475	yrdc	86	59.052	Neolamprologus_brichardi
ENSODEG00000007401	YRDC	100	89.524	ENSNLEG00000011665	YRDC	99	87.004	Nomascus_leucogenys
ENSODEG00000007401	YRDC	100	87.619	ENSMEUG00000005068	YRDC	100	81.395	Notamacropus_eugenii
ENSODEG00000007401	YRDC	100	70.476	ENSONIG00000016213	yrdc	95	58.261	Oreochromis_niloticus
ENSODEG00000007401	YRDC	85	83.146	ENSOANG00000002048	-	86	76.364	Ornithorhynchus_anatinus
ENSODEG00000007401	YRDC	100	89.286	ENSOCUG00000005384	YRDC	96	89.286	Oryctolagus_cuniculus
ENSODEG00000007401	YRDC	99	64.423	ENSORLG00000014393	yrdc	86	56.710	Oryzias_latipes
ENSODEG00000007401	YRDC	99	64.423	ENSORLG00020019663	yrdc	86	56.769	Oryzias_latipes_hni
ENSODEG00000007401	YRDC	99	64.423	ENSORLG00015004625	yrdc	86	57.205	Oryzias_latipes_hsok
ENSODEG00000007401	YRDC	99	64.423	ENSOMEG00000018550	yrdc	85	57.709	Oryzias_melastigma
ENSODEG00000007401	YRDC	100	87.619	ENSOGAG00000030474	YRDC	100	86.957	Otolemur_garnettii
ENSODEG00000007401	YRDC	100	89.524	ENSOARG00000019873	YRDC	96	82.609	Ovis_aries
ENSODEG00000007401	YRDC	100	89.524	ENSPPAG00000039722	-	99	87.075	Pan_paniscus
ENSODEG00000007401	YRDC	100	88.571	ENSPPRG00000007752	YRDC	99	88.849	Panthera_pardus
ENSODEG00000007401	YRDC	100	88.571	ENSPTIG00000019821	YRDC	67	83.333	Panthera_tigris_altaica
ENSODEG00000007401	YRDC	100	89.524	ENSPTRG00000000557	YRDC	99	87.050	Pan_troglodytes
ENSODEG00000007401	YRDC	100	87.619	ENSPANG00000006487	YRDC	75	86.331	Papio_anubis
ENSODEG00000007401	YRDC	100	67.619	ENSPKIG00000004574	yrdc	81	60.793	Paramormyrops_kingsleyae
ENSODEG00000007401	YRDC	100	74.286	ENSPSIG00000006483	YRDC	73	66.827	Pelodiscus_sinensis
ENSODEG00000007401	YRDC	100	68.571	ENSPMGG00000004184	yrdc	88	59.389	Periophthalmus_magnuspinnatus
ENSODEG00000007401	YRDC	100	89.524	ENSPEMG00000016985	Yrdc	93	74.236	Peromyscus_maniculatus_bairdii
ENSODEG00000007401	YRDC	98	54.808	ENSPMAG00000002905	yrdc	96	56.180	Petromyzon_marinus
ENSODEG00000007401	YRDC	100	85.714	ENSPCIG00000025731	YRDC	94	74.016	Phascolarctos_cinereus
ENSODEG00000007401	YRDC	100	66.667	ENSPFOG00000023097	yrdc	84	57.895	Poecilia_formosa
ENSODEG00000007401	YRDC	100	65.714	ENSPLAG00000020882	yrdc	84	57.456	Poecilia_latipinna
ENSODEG00000007401	YRDC	100	66.667	ENSPMEG00000013237	yrdc	85	57.895	Poecilia_mexicana
ENSODEG00000007401	YRDC	100	65.714	ENSPREG00000005285	yrdc	84	57.456	Poecilia_reticulata
ENSODEG00000007401	YRDC	100	89.524	ENSPPYG00000001523	-	93	87.281	Pongo_abelii
ENSODEG00000007401	YRDC	100	83.810	ENSPCAG00000016850	YRDC	99	82.671	Procavia_capensis
ENSODEG00000007401	YRDC	100	91.429	ENSPCOG00000013214	YRDC	99	87.770	Propithecus_coquereli
ENSODEG00000007401	YRDC	100	89.524	ENSPVAG00000010147	YRDC	99	87.681	Pteropus_vampyrus
ENSODEG00000007401	YRDC	99	71.154	ENSPNYG00000013956	yrdc	84	59.912	Pundamilia_nyererei
ENSODEG00000007401	YRDC	98	67.961	ENSPNAG00000015625	yrdc	86	60.664	Pygocentrus_nattereri
ENSODEG00000007401	YRDC	100	91.429	ENSRNOG00000025424	Yrdc	100	85.714	Rattus_norvegicus
ENSODEG00000007401	YRDC	100	88.571	ENSRBIG00000032289	YRDC	99	86.331	Rhinopithecus_bieti
ENSODEG00000007401	YRDC	100	88.571	ENSRROG00000039370	YRDC	71	88.517	Rhinopithecus_roxellana
ENSODEG00000007401	YRDC	100	89.524	ENSSBOG00000018937	YRDC	93	80.172	Saimiri_boliviensis_boliviensis
ENSODEG00000007401	YRDC	100	84.762	ENSSHAG00000013957	-	99	80.137	Sarcophilus_harrisii
ENSODEG00000007401	YRDC	100	68.571	ENSSFOG00015006128	yrdc	88	64.078	Scleropages_formosus
ENSODEG00000007401	YRDC	100	70.476	ENSSMAG00000005195	yrdc	94	57.087	Scophthalmus_maximus
ENSODEG00000007401	YRDC	67	30.882	ENSSDUG00000006736	-	81	32.484	Seriola_dumerili
ENSODEG00000007401	YRDC	67	30.457	ENSSDUG00000006631	-	76	31.098	Seriola_dumerili
ENSODEG00000007401	YRDC	100	68.571	ENSSDUG00000009775	yrdc	94	56.693	Seriola_dumerili
ENSODEG00000007401	YRDC	57	30.303	ENSSLDG00000008694	-	75	30.864	Seriola_lalandi_dorsalis
ENSODEG00000007401	YRDC	100	68.571	ENSSLDG00000003196	yrdc	94	56.693	Seriola_lalandi_dorsalis
ENSODEG00000007401	YRDC	100	75.238	ENSSPUG00000003946	YRDC	80	66.667	Sphenodon_punctatus
ENSODEG00000007401	YRDC	100	65.714	ENSSPAG00000012559	yrdc	87	56.170	Stegastes_partitus
ENSODEG00000007401	YRDC	100	88.571	ENSSSCG00000040425	YRDC	100	88.530	Sus_scrofa
ENSODEG00000007401	YRDC	100	79.048	ENSTGUG00000001507	YRDC	98	74.306	Taeniopygia_guttata
ENSODEG00000007401	YRDC	100	60.952	ENSTRUG00000005923	yrdc	87	55.000	Takifugu_rubripes
ENSODEG00000007401	YRDC	98	86.408	ENSTBEG00000008863	YRDC	100	87.342	Tupaia_belangeri
ENSODEG00000007401	YRDC	100	88.571	ENSTTRG00000013538	-	96	85.915	Tursiops_truncatus
ENSODEG00000007401	YRDC	100	86.667	ENSUAMG00000006150	YRDC	100	88.670	Ursus_americanus
ENSODEG00000007401	YRDC	85	91.011	ENSVPAG00000006642	YRDC	97	73.451	Vicugna_pacos
ENSODEG00000007401	YRDC	100	84.762	ENSVVUG00000023132	-	50	82.667	Vulpes_vulpes
ENSODEG00000007401	YRDC	100	74.286	ENSXETG00000014420	yrdc	97	62.931	Xenopus_tropicalis
ENSODEG00000007401	YRDC	100	63.810	ENSXCOG00000000829	yrdc	94	56.579	Xiphophorus_couchianus
ENSODEG00000007401	YRDC	100	61.905	ENSXMAG00000014606	yrdc	79	55.702	Xiphophorus_maculatus