EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000007407 (Gene tree)
Gene ID
-
Gene Symbol
AFF1
Alias
-
Full Name
AF4/FMR2 family member 1
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Minus strand
Length
86762 bases
Position
chrJH651543.1:3518659-3605420
Accession
101568123
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000009904AF-4PF05110.134.3e-28412
ENSODEP00000009904AF-4PF05110.134.3e-28422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000010051AFF1-2013150XM_012514263ENSODEP000000099041049 (aa)--
Gene Model
Click here to download ENSODEG00000007407's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007407's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000007407AFF18239.796ENSODEG00000009737AFF27042.466
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000007407AFF19189.362ENSG00000172493AFF19080.000Homo_sapiens
ENSODEG00000007407AFF18338.393ENSG00000155966AFF28933.095Homo_sapiens
ENSODEG00000007407AFF17639.474ENSAPOG00000006096aff47141.489Acanthochromis_polyacanthus
ENSODEG00000007407AFF19871.186ENSAMEG00000003337AFF19175.424Ailuropoda_melanoleuca
ENSODEG00000007407AFF15839.175ENSAMEG00000014934AFF25242.466Ailuropoda_melanoleuca
ENSODEG00000007407AFF17640.000ENSAOCG00000008476aff46741.489Amphiprion_ocellaris
ENSODEG00000007407AFF17836.129ENSAPEG00000018275aff46839.796Amphiprion_percula
ENSODEG00000007407AFF17638.596ENSATEG00000010963aff48840.426Anabas_testudineus
ENSODEG00000007407AFF19956.250ENSAPLG00000004059AFF19156.250Anas_platyrhynchos
ENSODEG00000007407AFF17745.217ENSAPLG00000011166AFF48845.745Anas_platyrhynchos
ENSODEG00000007407AFF19238.065ENSACAG00000022605AFF48939.796Anolis_carolinensis
ENSODEG00000007407AFF17137.209ENSACAG00000010688AFF25737.209Anolis_carolinensis
ENSODEG00000007407AFF19455.556ENSACAG00000012192AFF18751.163Anolis_carolinensis
ENSODEG00000007407AFF18238.144ENSANAG00000023509AFF27142.466Aotus_nancymaae
ENSODEG00000007407AFF19186.047ENSANAG00000017095AFF19178.512Aotus_nancymaae
ENSODEG00000007407AFF15738.261ENSACLG00000011879aff46741.489Astatotilapia_calliptera
ENSODEG00000007407AFF18238.144ENSCJAG00000000061AFF27142.466Callithrix_jacchus
ENSODEG00000007407AFF19581.928ENSCJAG00000006047AFF19178.512Callithrix_jacchus
ENSODEG00000007407AFF15838.144ENSCAFG00000019094AFF25241.096Canis_familiaris
ENSODEG00000007407AFF19486.842ENSCAFG00000009476AFF19362.987Canis_familiaris
ENSODEG00000007407AFF16134.351ENSCAFG00020024359AFF25042.466Canis_lupus_dingo
ENSODEG00000007407AFF17159.052ENSTSYG00000002039AFF110059.562Carlito_syrichta
ENSODEG00000007407AFF110075.839ENSCAPG00000006540AFF19475.839Cavia_aperea
ENSODEG00000007407AFF110073.415ENSCPOG00000034568AFF19573.517Cavia_porcellus
ENSODEG00000007407AFF19186.047ENSCCAG00000027623AFF19177.686Cebus_capucinus
ENSODEG00000007407AFF18238.144ENSCATG00000040342AFF27042.466Cercocebus_atys
ENSODEG00000007407AFF19190.000ENSCATG00000039501AFF18981.250Cercocebus_atys
ENSODEG00000007407AFF110078.622ENSCLAG00000005537AFF19377.913Chinchilla_lanigera
ENSODEG00000007407AFF19583.750ENSCSAG00000004333AFF19180.000Chlorocebus_sabaeus
ENSODEG00000007407AFF18238.144ENSCSAG00000007248AFF27142.466Chlorocebus_sabaeus
ENSODEG00000007407AFF16981.395ENSCHOG00000000041AFF16875.000Choloepus_hoffmanni
ENSODEG00000007407AFF19655.435ENSCPBG00000005382AFF19157.031Chrysemys_picta_bellii
ENSODEG00000007407AFF18238.144ENSCANG00000029116AFF27142.466Colobus_angolensis_palliatus
ENSODEG00000007407AFF19090.000ENSCANG00000037514AFF19179.832Colobus_angolensis_palliatus
ENSODEG00000007407AFF19882.500ENSCGRG00001015769Aff19182.500Cricetulus_griseus_chok1gshd
ENSODEG00000007407AFF15482.500ENSCGRG00000004837Aff18782.500Cricetulus_griseus_crigri
ENSODEG00000007407AFF17640.000ENSCSEG00000017002aff46944.444Cynoglossus_semilaevis
ENSODEG00000007407AFF19441.096ENSDARG00000052242aff27341.860Danio_rerio
ENSODEG00000007407AFF16579.518ENSDNOG00000048783-9164.474Dasypus_novemcinctus
ENSODEG00000007407AFF16460.606ENSDORG00000007294Aff36560.606Dipodomys_ordii
ENSODEG00000007407AFF19965.563ENSDORG00000013881Aff19365.563Dipodomys_ordii
ENSODEG00000007407AFF19578.824ENSETEG00000014905AFF18876.042Echinops_telfairi
ENSODEG00000007407AFF19480.247ENSEASG00005012760AFF19363.816Equus_asinus_asinus
ENSODEG00000007407AFF110063.816ENSECAG00000003619AFF19960.915Equus_caballus
ENSODEG00000007407AFF16987.500ENSEEUG00000013664-5987.500Erinaceus_europaeus
ENSODEG00000007407AFF17545.946ENSELUG00000023871aff48842.553Esox_lucius
ENSODEG00000007407AFF19484.211ENSFCAG00000029806AFF19074.790Felis_catus
ENSODEG00000007407AFF18239.175ENSFCAG00000004117AFF27142.466Felis_catus
ENSODEG00000007407AFF19853.659ENSFALG00000005554AFF18852.632Ficedula_albicollis
ENSODEG00000007407AFF15139.474ENSFALG00000012089AFF25139.535Ficedula_albicollis
ENSODEG00000007407AFF15459.091ENSFALG00000008916AFF47859.091Ficedula_albicollis
ENSODEG00000007407AFF16239.796ENSFDAG00000011981AFF25142.466Fukomys_damarensis
ENSODEG00000007407AFF19887.500ENSFDAG00000018846AFF19087.500Fukomys_damarensis
ENSODEG00000007407AFF15858.462ENSGALG00000009168AFF25258.462Gallus_gallus
ENSODEG00000007407AFF19954.762ENSGALG00000043935AFF18854.444Gallus_gallus
ENSODEG00000007407AFF17637.273ENSGAFG00000005288aff47240.741Gambusia_affinis
ENSODEG00000007407AFF17638.182ENSGACG00000020734aff48742.500Gasterosteus_aculeatus
ENSODEG00000007407AFF17744.444ENSGAGG00000020214AFF48844.828Gopherus_agassizii
ENSODEG00000007407AFF18238.144ENSGGOG00000010543AFF27142.466Gorilla_gorilla
ENSODEG00000007407AFF19583.750ENSGGOG00000008497AFF19179.832Gorilla_gorilla
ENSODEG00000007407AFF15738.261ENSHBUG00000021987aff46841.489Haplochromis_burtoni
ENSODEG00000007407AFF18238.144ENSHGLG00000000634AFF27042.466Heterocephalus_glaber_female
ENSODEG00000007407AFF110074.897ENSHGLG00000001384AFF19374.717Heterocephalus_glaber_female
ENSODEG00000007407AFF19971.160ENSHGLG00100016607AFF19371.712Heterocephalus_glaber_male
ENSODEG00000007407AFF15039.813ENSHCOG00000016280aff48841.237Hippocampus_comes
ENSODEG00000007407AFF19589.024ENSSTOG00000006530AFF19184.167Ictidomys_tridecemlineatus
ENSODEG00000007407AFF19876.667ENSJJAG00000022877Aff19076.667Jaculus_jaculus
ENSODEG00000007407AFF17640.909ENSKMAG00000010443aff47139.560Kryptolebias_marmoratus
ENSODEG00000007407AFF17739.091ENSLBEG00000017778aff46841.489Labrus_bergylta
ENSODEG00000007407AFF17441.739ENSLACG00000008849AFF47443.750Latimeria_chalumnae
ENSODEG00000007407AFF19455.844ENSLACG00000007303AFF19943.227Latimeria_chalumnae
ENSODEG00000007407AFF15438.261ENSLACG00000009317-7838.261Latimeria_chalumnae
ENSODEG00000007407AFF17244.595ENSLOCG00000010610aff48842.553Lepisosteus_oculatus
ENSODEG00000007407AFF19090.000ENSMFAG00000037700AFF19180.000Macaca_fascicularis
ENSODEG00000007407AFF18238.144ENSMFAG00000044807AFF27142.466Macaca_fascicularis
ENSODEG00000007407AFF18238.144ENSMMUG00000000466AFF27142.466Macaca_mulatta
ENSODEG00000007407AFF19583.750ENSMMUG00000014076AFF19180.000Macaca_mulatta
ENSODEG00000007407AFF18238.144ENSMNEG00000035909AFF27142.466Macaca_nemestrina
ENSODEG00000007407AFF19190.000ENSMNEG00000031536AFF18981.250Macaca_nemestrina
ENSODEG00000007407AFF18238.144ENSMLEG00000038832AFF27142.466Mandrillus_leucophaeus
ENSODEG00000007407AFF19190.000ENSMLEG00000039099AFF18981.250Mandrillus_leucophaeus
ENSODEG00000007407AFF17640.909ENSMAMG00000021453aff46742.553Mastacembelus_armatus
ENSODEG00000007407AFF15738.261ENSMZEG00005003218aff46841.489Maylandia_zebra
ENSODEG00000007407AFF17245.370ENSMGAG00000009144AFF48845.977Meleagris_gallopavo
ENSODEG00000007407AFF19954.762ENSMGAG00000007646AFF18854.444Meleagris_gallopavo
ENSODEG00000007407AFF19880.833ENSMAUG00000010241Aff19180.833Mesocricetus_auratus
ENSODEG00000007407AFF16647.692ENSMAUG00000013669Aff48449.231Mesocricetus_auratus
ENSODEG00000007407AFF16949.002ENSMICG00000028855-8450.756Microcebus_murinus
ENSODEG00000007407AFF19873.333ENSMOCG00000017389Aff19173.333Microtus_ochrogaster
ENSODEG00000007407AFF17741.818ENSMODG00000013842AFF48843.678Monodelphis_domestica
ENSODEG00000007407AFF19861.404ENSMODG00000020745AFF18665.556Monodelphis_domestica
ENSODEG00000007407AFF17638.182ENSMALG00000017690aff46642.529Monopterus_albus
ENSODEG00000007407AFF15538.144MGP_CAROLIEiJ_G0033123Aff27042.466Mus_caroli
ENSODEG00000007407AFF15841.228MGP_CAROLIEiJ_G0016331Aff49041.250Mus_caroli
ENSODEG00000007407AFF19580.488MGP_CAROLIEiJ_G0027469Aff19364.000Mus_caroli
ENSODEG00000007407AFF18239.394ENSMUSG00000031189Aff26442.466Mus_musculus
ENSODEG00000007407AFF110064.667ENSMUSG00000029313Aff19364.667Mus_musculus
ENSODEG00000007407AFF15546.154ENSMUSG00000049470Aff48941.250Mus_musculus
ENSODEG00000007407AFF15735.000MGP_PahariEiJ_G0031666Aff27042.466Mus_pahari
ENSODEG00000007407AFF19877.686MGP_PahariEiJ_G0017247Aff19364.667Mus_pahari
ENSODEG00000007407AFF15546.154MGP_PahariEiJ_G0017466Aff49038.994Mus_pahari
ENSODEG00000007407AFF110064.667MGP_SPRETEiJ_G0028466Aff19364.667Mus_spretus
ENSODEG00000007407AFF15546.154MGP_SPRETEiJ_G0017175Aff49041.250Mus_spretus
ENSODEG00000007407AFF18239.394MGP_SPRETEiJ_G0034278Aff27042.466Mus_spretus
ENSODEG00000007407AFF15839.175ENSMPUG00000011473AFF25342.466Mustela_putorius_furo
ENSODEG00000007407AFF110060.239ENSMPUG00000002270AFF18978.125Mustela_putorius_furo
ENSODEG00000007407AFF110060.341ENSMLUG00000000293AFF19359.880Myotis_lucifugus
ENSODEG00000007407AFF16240.351ENSNGAG00000019867Aff47542.857Nannospalax_galili
ENSODEG00000007407AFF19584.337ENSNLEG00000009429AFF18881.250Nomascus_leucogenys
ENSODEG00000007407AFF18238.144ENSNLEG00000013346AFF27142.466Nomascus_leucogenys
ENSODEG00000007407AFF19869.167ENSOPRG00000017154-9169.167Ochotona_princeps
ENSODEG00000007407AFF17738.261ENSONIG00000008446aff46840.426Oreochromis_niloticus
ENSODEG00000007407AFF19665.217ENSOANG00000013624AFF18765.217Ornithorhynchus_anatinus
ENSODEG00000007407AFF16242.982ENSOCUG00000013635AFF45442.857Oryctolagus_cuniculus
ENSODEG00000007407AFF19583.133ENSOCUG00000002105AFF19066.887Oryctolagus_cuniculus
ENSODEG00000007407AFF17835.948ENSOMEG00000005078aff48839.583Oryzias_melastigma
ENSODEG00000007407AFF16944.643ENSOGAG00000031211-8670.000Otolemur_garnettii
ENSODEG00000007407AFF110065.789ENSOGAG00000009622-9365.789Otolemur_garnettii
ENSODEG00000007407AFF19877.500ENSOARG00000004522AFF19177.500Ovis_aries
ENSODEG00000007407AFF19583.750ENSPPAG00000029196AFF19180.000Pan_paniscus
ENSODEG00000007407AFF18238.144ENSPPAG00000040251AFF27142.466Pan_paniscus
ENSODEG00000007407AFF18239.175ENSPPRG00000019488AFF27142.466Panthera_pardus
ENSODEG00000007407AFF19484.211ENSPPRG00000023590AFF19074.790Panthera_pardus
ENSODEG00000007407AFF15139.175ENSPTIG00000018890AFF28933.333Panthera_tigris_altaica
ENSODEG00000007407AFF17784.211ENSPTIG00000011838AFF18874.790Panthera_tigris_altaica
ENSODEG00000007407AFF19583.750ENSPTRG00000016255AFF19180.000Pan_troglodytes
ENSODEG00000007407AFF15138.144ENSPTRG00000022353AFF25942.466Pan_troglodytes
ENSODEG00000007407AFF18238.144ENSPANG00000002926AFF27142.466Papio_anubis
ENSODEG00000007407AFF19363.934ENSPANG00000016722AFF19067.327Papio_anubis
ENSODEG00000007407AFF18132.353ENSPKIG00000024249AFF47540.860Paramormyrops_kingsleyae
ENSODEG00000007407AFF19656.522ENSPSIG00000003759AFF18856.522Pelodiscus_sinensis
ENSODEG00000007407AFF17742.593ENSPSIG00000013003AFF48845.977Pelodiscus_sinensis
ENSODEG00000007407AFF19582.716ENSPEMG00000000785Aff19953.776Peromyscus_maniculatus_bairdii
ENSODEG00000007407AFF16341.818ENSPCIG00000000197AFF48842.529Phascolarctos_cinereus
ENSODEG00000007407AFF18258.462ENSPCIG00000030054AFF27135.955Phascolarctos_cinereus
ENSODEG00000007407AFF18978.571ENSPCIG00000011395AFF18878.571Phascolarctos_cinereus
ENSODEG00000007407AFF17637.273ENSPFOG00000007079aff45237.719Poecilia_formosa
ENSODEG00000007407AFF15258.065ENSPLAG00000005101aff25758.065Poecilia_latipinna
ENSODEG00000007407AFF17637.273ENSPLAG00000001837aff47437.719Poecilia_latipinna
ENSODEG00000007407AFF17637.273ENSPMEG00000005613aff45237.719Poecilia_mexicana
ENSODEG00000007407AFF17637.273ENSPREG00000005287aff47437.719Poecilia_reticulata
ENSODEG00000007407AFF19583.750ENSPPYG00000014910AFF19080.000Pongo_abelii
ENSODEG00000007407AFF17285.000ENSPCAG00000005658AFF16685.000Procavia_capensis
ENSODEG00000007407AFF15838.144ENSPCOG00000013963AFF25042.466Propithecus_coquereli
ENSODEG00000007407AFF19759.016ENSPCOG00000027339AFF19159.016Propithecus_coquereli
ENSODEG00000007407AFF19561.243ENSPVAG00000014455AFF19360.526Pteropus_vampyrus
ENSODEG00000007407AFF15738.261ENSPNYG00000014804aff46841.489Pundamilia_nyererei
ENSODEG00000007407AFF15538.144ENSRNOG00000052572LOC1036903027042.466Rattus_norvegicus
ENSODEG00000007407AFF110064.000ENSRNOG00000002232Aff19364.000Rattus_norvegicus
ENSODEG00000007407AFF19090.000ENSRBIG00000032242AFF19180.000Rhinopithecus_bieti
ENSODEG00000007407AFF19190.000ENSRROG00000045716AFF19180.000Rhinopithecus_roxellana
ENSODEG00000007407AFF15139.796ENSRROG00000044189AFF26142.466Rhinopithecus_roxellana
ENSODEG00000007407AFF18238.144ENSSBOG00000020604AFF27142.466Saimiri_boliviensis_boliviensis
ENSODEG00000007407AFF19186.047ENSSBOG00000035401AFF19366.013Saimiri_boliviensis_boliviensis
ENSODEG00000007407AFF19564.198ENSSHAG00000004203AFF18862.921Sarcophilus_harrisii
ENSODEG00000007407AFF17436.986ENSSHAG00000009556AFF26635.955Sarcophilus_harrisii
ENSODEG00000007407AFF19742.342ENSSHAG00000013198AFF48844.828Sarcophilus_harrisii
ENSODEG00000007407AFF17840.000ENSSMAG00000004734aff48941.489Scophthalmus_maximus
ENSODEG00000007407AFF17835.714ENSSDUG00000019498aff48939.175Seriola_dumerili
ENSODEG00000007407AFF17835.714ENSSLDG00000007683aff46739.175Seriola_lalandi_dorsalis
ENSODEG00000007407AFF110046.443ENSSPUG00000001574AFF19350.633Sphenodon_punctatus
ENSODEG00000007407AFF15476.667ENSSSCG00000023593AFF19364.000Sus_scrofa
ENSODEG00000007407AFF16636.943ENSTGUG00000000187AFF48843.678Taeniopygia_guttata
ENSODEG00000007407AFF19857.143ENSTGUG00000002726AFF18858.621Taeniopygia_guttata
ENSODEG00000007407AFF17440.000ENSTRUG00000008087aff46741.489Takifugu_rubripes
ENSODEG00000007407AFF17635.714ENSTNIG00000018201aff46939.175Tetraodon_nigroviridis
ENSODEG00000007407AFF19969.333ENSTBEG00000007536AFF19369.333Tupaia_belangeri
ENSODEG00000007407AFF18862.093ENSUAMG00000001919AFF19962.192Ursus_americanus
ENSODEG00000007407AFF17372.500ENSUMAG00000025433AFF17576.667Ursus_maritimus
ENSODEG00000007407AFF110067.347ENSVPAG00000004007AFF19367.347Vicugna_pacos
ENSODEG00000007407AFF15839.175ENSVVUG00000000805AFF25442.466Vulpes_vulpes
ENSODEG00000007407AFF19486.842ENSVVUG00000009263AFF18877.500Vulpes_vulpes
ENSODEG00000007407AFF19856.303ENSXETG00000019955aff19056.303Xenopus_tropicalis
ENSODEG00000007407AFF17043.056ENSXETG00000004169aff47244.444Xenopus_tropicalis
ENSODEG00000007407AFF17640.000ENSXMAG00000001642aff47339.362Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us