EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000007529 (Gene tree)
Gene ID: 101578757
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 6153 bases
Position: chrJH651551.1:9474436-9480588
Accession: 101578757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010070	R3H	PF01424.22	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010218	R3HCC1-201	1410	XM_004630732	ENSODEP00000010070	469 (aa)	-	-

Gene Model

Click here to download ENSODEG00000007529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007529	R3HCC1	99	70.149	ENSG00000104679	R3HCC1	100	93.023	Homo_sapiens
ENSODEG00000007529	R3HCC1	62	44.156	ENSAPOG00000003616	r3hcc1	65	44.156	Acanthochromis_polyacanthus
ENSODEG00000007529	R3HCC1	99	66.878	ENSAMEG00000002963	R3HCC1	90	66.237	Ailuropoda_melanoleuca
ENSODEG00000007529	R3HCC1	69	41.667	ENSACIG00000017144	r3hcc1	84	39.583	Amphilophus_citrinellus
ENSODEG00000007529	R3HCC1	58	45.578	ENSAOCG00000003945	r3hcc1	98	31.906	Amphiprion_ocellaris
ENSODEG00000007529	R3HCC1	58	45.578	ENSAPEG00000003613	r3hcc1	98	31.692	Amphiprion_percula
ENSODEG00000007529	R3HCC1	54	43.243	ENSATEG00000023860	r3hcc1	68	41.026	Anabas_testudineus
ENSODEG00000007529	R3HCC1	97	46.368	ENSACAG00000016627	R3HCC1	96	45.684	Anolis_carolinensis
ENSODEG00000007529	R3HCC1	99	69.198	ENSANAG00000036169	R3HCC1	93	69.165	Aotus_nancymaae
ENSODEG00000007529	R3HCC1	99	67.021	ENSBTAG00000025830	R3HCC1	94	66.667	Bos_taurus
ENSODEG00000007529	R3HCC1	99	68.870	ENSCJAG00000020118	R3HCC1	98	62.366	Callithrix_jacchus
ENSODEG00000007529	R3HCC1	99	64.693	ENSCAFG00000009210	R3HCC1	93	64.655	Canis_familiaris
ENSODEG00000007529	R3HCC1	85	62.095	ENSCAFG00020012870	R3HCC1	86	61.845	Canis_lupus_dingo
ENSODEG00000007529	R3HCC1	99	63.299	ENSCHIG00000009107	R3HCC1	98	62.733	Capra_hircus
ENSODEG00000007529	R3HCC1	99	71.154	ENSTSYG00000000511	R3HCC1	76	70.386	Carlito_syrichta
ENSODEG00000007529	R3HCC1	90	66.022	ENSCAPG00000015813	R3HCC1	99	65.652	Cavia_aperea
ENSODEG00000007529	R3HCC1	99	72.530	ENSCPOG00000009696	R3HCC1	99	72.255	Cavia_porcellus
ENSODEG00000007529	R3HCC1	99	69.296	ENSCCAG00000037811	R3HCC1	98	62.581	Cebus_capucinus
ENSODEG00000007529	R3HCC1	99	69.658	ENSCATG00000032971	R3HCC1	98	63.011	Cercocebus_atys
ENSODEG00000007529	R3HCC1	99	80.983	ENSCLAG00000015556	R3HCC1	82	80.087	Chinchilla_lanigera
ENSODEG00000007529	R3HCC1	99	69.872	ENSCSAG00000016250	R3HCC1	90	69.528	Chlorocebus_sabaeus
ENSODEG00000007529	R3HCC1	99	64.407	ENSCHOG00000000396	R3HCC1	94	63.966	Choloepus_hoffmanni
ENSODEG00000007529	R3HCC1	99	70.149	ENSCANG00000029441	R3HCC1	98	62.796	Colobus_angolensis_palliatus
ENSODEG00000007529	R3HCC1	99	58.607	ENSCGRG00001014977	R3hcc1	98	60.915	Cricetulus_griseus_chok1gshd
ENSODEG00000007529	R3HCC1	99	58.607	ENSCGRG00000004454	R3hcc1	98	60.915	Cricetulus_griseus_crigri
ENSODEG00000007529	R3HCC1	97	33.117	ENSCSEG00000005748	r3hcc1	99	31.866	Cynoglossus_semilaevis
ENSODEG00000007529	R3HCC1	87	31.981	ENSCVAG00000002640	r3hcc1	98	31.265	Cyprinodon_variegatus
ENSODEG00000007529	R3HCC1	62	44.138	ENSDARG00000099593	r3hcc1	74	44.138	Danio_rerio
ENSODEG00000007529	R3HCC1	99	68.008	ENSDNOG00000007168	R3HCC1	90	68.172	Dasypus_novemcinctus
ENSODEG00000007529	R3HCC1	99	59.808	ENSDORG00000026365	R3hcc1	98	62.863	Dipodomys_ordii
ENSODEG00000007529	R3HCC1	98	59.915	ENSETEG00000001147	R3HCC1	95	59.402	Echinops_telfairi
ENSODEG00000007529	R3HCC1	99	67.437	ENSEASG00005018782	R3HCC1	79	66.809	Equus_asinus_asinus
ENSODEG00000007529	R3HCC1	99	67.437	ENSECAG00000025013	R3HCC1	96	67.452	Equus_caballus
ENSODEG00000007529	R3HCC1	99	64.905	ENSEEUG00000011918	R3HCC1	94	64.301	Erinaceus_europaeus
ENSODEG00000007529	R3HCC1	93	33.114	ENSELUG00000023650	r3hcc1	76	46.154	Esox_lucius
ENSODEG00000007529	R3HCC1	99	67.585	ENSFCAG00000012395	R3HCC1	94	67.888	Felis_catus
ENSODEG00000007529	R3HCC1	97	38.182	ENSFALG00000001646	R3HCC1	81	38.571	Ficedula_albicollis
ENSODEG00000007529	R3HCC1	100	69.215	ENSFDAG00000001572	R3HCC1	98	69.057	Fukomys_damarensis
ENSODEG00000007529	R3HCC1	65	37.410	ENSGMOG00000017590	-	66	46.429	Gadus_morhua
ENSODEG00000007529	R3HCC1	98	33.403	ENSGAFG00000008747	-	92	34.186	Gambusia_affinis
ENSODEG00000007529	R3HCC1	65	43.902	ENSGACG00000008447	r3hcc1	69	46.000	Gasterosteus_aculeatus
ENSODEG00000007529	R3HCC1	99	71.183	ENSGGOG00000013817	R3HCC1	98	69.978	Gorilla_gorilla
ENSODEG00000007529	R3HCC1	100	74.735	ENSHGLG00000010517	R3HCC1	90	72.979	Heterocephalus_glaber_female
ENSODEG00000007529	R3HCC1	100	74.735	ENSHGLG00100006388	R3HCC1	90	72.979	Heterocephalus_glaber_male
ENSODEG00000007529	R3HCC1	73	40.278	ENSHCOG00000011745	r3hcc1	85	44.444	Hippocampus_comes
ENSODEG00000007529	R3HCC1	97	36.009	ENSIPUG00000024504	r3hcc1	87	35.358	Ictalurus_punctatus
ENSODEG00000007529	R3HCC1	99	61.378	ENSSTOG00000027130	R3HCC1	93	61.229	Ictidomys_tridecemlineatus
ENSODEG00000007529	R3HCC1	99	61.924	ENSJJAG00000013075	R3hcc1	98	62.322	Jaculus_jaculus
ENSODEG00000007529	R3HCC1	93	31.707	ENSKMAG00000000286	r3hcc1	99	30.586	Kryptolebias_marmoratus
ENSODEG00000007529	R3HCC1	97	38.495	ENSLACG00000011894	R3HCC1	97	38.280	Latimeria_chalumnae
ENSODEG00000007529	R3HCC1	97	35.269	ENSLOCG00000015442	r3hcc1	94	34.423	Lepisosteus_oculatus
ENSODEG00000007529	R3HCC1	98	62.130	ENSLAFG00000016137	R3HCC1	94	61.462	Loxodonta_africana
ENSODEG00000007529	R3HCC1	99	69.872	ENSMFAG00000032894	R3HCC1	98	63.226	Macaca_fascicularis
ENSODEG00000007529	R3HCC1	99	69.658	ENSMMUG00000016655	R3HCC1	98	63.226	Macaca_mulatta
ENSODEG00000007529	R3HCC1	99	69.231	ENSMNEG00000043283	R3HCC1	98	62.581	Macaca_nemestrina
ENSODEG00000007529	R3HCC1	99	69.658	ENSMLEG00000030147	R3HCC1	98	63.441	Mandrillus_leucophaeus
ENSODEG00000007529	R3HCC1	61	42.683	ENSMAMG00000018146	r3hcc1	68	44.516	Mastacembelus_armatus
ENSODEG00000007529	R3HCC1	98	45.339	ENSMGAG00000001356	R3HCC1	90	44.068	Meleagris_gallopavo
ENSODEG00000007529	R3HCC1	99	70.042	ENSMICG00000011146	R3HCC1	98	64.224	Microcebus_murinus
ENSODEG00000007529	R3HCC1	98	45.397	ENSMODG00000016809	-	99	44.559	Monodelphis_domestica
ENSODEG00000007529	R3HCC1	92	32.802	ENSMALG00000000731	r3hcc1	98	32.414	Monopterus_albus
ENSODEG00000007529	R3HCC1	100	58.979	MGP_CAROLIEiJ_G0019467	R3hcc1	98	60.960	Mus_caroli
ENSODEG00000007529	R3HCC1	100	58.601	ENSMUSG00000034194	R3hcc1	98	60.752	Mus_musculus
ENSODEG00000007529	R3HCC1	100	59.274	MGP_PahariEiJ_G0030484	R3hcc1	98	58.436	Mus_pahari
ENSODEG00000007529	R3HCC1	100	61.258	MGP_SPRETEiJ_G0020359	R3hcc1	98	60.581	Mus_spretus
ENSODEG00000007529	R3HCC1	99	66.667	ENSMPUG00000003457	R3HCC1	85	65.806	Mustela_putorius_furo
ENSODEG00000007529	R3HCC1	99	64.632	ENSMLUG00000000266	R3HCC1	90	64.454	Myotis_lucifugus
ENSODEG00000007529	R3HCC1	99	66.194	ENSNGAG00000016747	R3hcc1	98	65.979	Nannospalax_galili
ENSODEG00000007529	R3HCC1	91	69.284	ENSNLEG00000015944	R3HCC1	85	67.898	Nomascus_leucogenys
ENSODEG00000007529	R3HCC1	98	54.860	ENSMEUG00000010587	R3HCC1	97	53.996	Notamacropus_eugenii
ENSODEG00000007529	R3HCC1	99	63.907	ENSOPRG00000013390	R3HCC1	93	63.793	Ochotona_princeps
ENSODEG00000007529	R3HCC1	98	54.292	ENSOANG00000013877	R3HCC1	95	54.194	Ornithorhynchus_anatinus
ENSODEG00000007529	R3HCC1	99	64.894	ENSOCUG00000023554	R3HCC1	84	65.525	Oryctolagus_cuniculus
ENSODEG00000007529	R3HCC1	93	31.818	ENSORLG00000016816	r3hcc1	99	32.222	Oryzias_latipes
ENSODEG00000007529	R3HCC1	65	39.785	ENSORLG00020012005	r3hcc1	72	41.447	Oryzias_latipes_hni
ENSODEG00000007529	R3HCC1	61	40.361	ENSORLG00015007018	r3hcc1	72	42.105	Oryzias_latipes_hsok
ENSODEG00000007529	R3HCC1	93	34.607	ENSOMEG00000000816	r3hcc1	99	34.607	Oryzias_melastigma
ENSODEG00000007529	R3HCC1	99	67.024	ENSOGAG00000001291	R3HCC1	90	65.948	Otolemur_garnettii
ENSODEG00000007529	R3HCC1	98	67.164	ENSOARG00000010146	R3HCC1	95	66.453	Ovis_aries
ENSODEG00000007529	R3HCC1	99	70.149	ENSPPAG00000033165	R3HCC1	98	68.951	Pan_paniscus
ENSODEG00000007529	R3HCC1	99	67.811	ENSPPRG00000002522	R3HCC1	98	67.888	Panthera_pardus
ENSODEG00000007529	R3HCC1	91	65.893	ENSPTIG00000011230	R3HCC1	94	65.581	Panthera_tigris_altaica
ENSODEG00000007529	R3HCC1	99	70.789	ENSPTRG00000020076	R3HCC1	98	65.161	Pan_troglodytes
ENSODEG00000007529	R3HCC1	99	69.658	ENSPANG00000000453	R3HCC1	98	63.011	Papio_anubis
ENSODEG00000007529	R3HCC1	67	42.857	ENSPKIG00000014426	-	72	50.336	Paramormyrops_kingsleyae
ENSODEG00000007529	R3HCC1	90	36.259	ENSPKIG00000020397	-	95	35.915	Paramormyrops_kingsleyae
ENSODEG00000007529	R3HCC1	98	46.218	ENSPSIG00000017664	R3HCC1	97	44.885	Pelodiscus_sinensis
ENSODEG00000007529	R3HCC1	99	59.884	ENSPEMG00000007118	R3hcc1	98	60.851	Peromyscus_maniculatus_bairdii
ENSODEG00000007529	R3HCC1	91	49.655	ENSPCIG00000022718	-	83	50.115	Phascolarctos_cinereus
ENSODEG00000007529	R3HCC1	97	34.565	ENSPFOG00000022301	r3hcc1	90	34.565	Poecilia_formosa
ENSODEG00000007529	R3HCC1	97	33.263	ENSPLAG00000010794	r3hcc1	90	33.405	Poecilia_latipinna
ENSODEG00000007529	R3HCC1	97	34.565	ENSPMEG00000022515	r3hcc1	90	34.565	Poecilia_mexicana
ENSODEG00000007529	R3HCC1	97	33.547	ENSPREG00000000713	r3hcc1	90	33.478	Poecilia_reticulata
ENSODEG00000007529	R3HCC1	91	69.425	ENSPPYG00000018436	R3HCC1	98	68.129	Pongo_abelii
ENSODEG00000007529	R3HCC1	62	83.673	ENSPCAG00000012229	R3HCC1	65	82.313	Procavia_capensis
ENSODEG00000007529	R3HCC1	99	68.354	ENSPCOG00000027554	R3HCC1	98	67.957	Propithecus_coquereli
ENSODEG00000007529	R3HCC1	99	66.454	ENSPVAG00000009829	R3HCC1	94	65.598	Pteropus_vampyrus
ENSODEG00000007529	R3HCC1	60	46.154	ENSPNAG00000023875	r3hcc1	88	46.154	Pygocentrus_nattereri
ENSODEG00000007529	R3HCC1	100	59.429	ENSRNOG00000016777	AABR07018321.1	80	62.134	Rattus_norvegicus
ENSODEG00000007529	R3HCC1	99	70.789	ENSRBIG00000028045	R3HCC1	98	69.593	Rhinopithecus_bieti
ENSODEG00000007529	R3HCC1	99	70.789	ENSRROG00000031126	R3HCC1	98	63.441	Rhinopithecus_roxellana
ENSODEG00000007529	R3HCC1	99	69.296	ENSSBOG00000022590	R3HCC1	98	68.094	Saimiri_boliviensis_boliviensis
ENSODEG00000007529	R3HCC1	50	86.905	ENSSHAG00000016526	-	50	86.905	Sarcophilus_harrisii
ENSODEG00000007529	R3HCC1	64	47.090	ENSSFOG00015013507	r3hcc1	71	50.993	Scleropages_formosus
ENSODEG00000007529	R3HCC1	93	32.037	ENSSMAG00000008647	r3hcc1	99	30.482	Scophthalmus_maximus
ENSODEG00000007529	R3HCC1	69	42.282	ENSSDUG00000022786	r3hcc1	97	31.393	Seriola_dumerili
ENSODEG00000007529	R3HCC1	95	31.702	ENSSPAG00000013497	r3hcc1	98	31.702	Stegastes_partitus
ENSODEG00000007529	R3HCC1	98	61.075	ENSSSCG00000037347	-	88	60.215	Sus_scrofa
ENSODEG00000007529	R3HCC1	99	67.804	ENSSSCG00000039915	-	91	67.024	Sus_scrofa
ENSODEG00000007529	R3HCC1	96	32.159	ENSTRUG00000015880	r3hcc1	98	32.088	Takifugu_rubripes
ENSODEG00000007529	R3HCC1	98	61.588	ENSTTRG00000012247	R3HCC1	94	61.123	Tursiops_truncatus
ENSODEG00000007529	R3HCC1	99	66.173	ENSUAMG00000007344	R3HCC1	98	65.591	Ursus_americanus
ENSODEG00000007529	R3HCC1	99	65.328	ENSVVUG00000005056	R3HCC1	93	65.302	Vulpes_vulpes
ENSODEG00000007529	R3HCC1	59	43.919	ENSXCOG00000017626	r3hcc1	89	32.071	Xiphophorus_couchianus
ENSODEG00000007529	R3HCC1	62	43.537	ENSXMAG00000018375	r3hcc1	92	31.481	Xiphophorus_maculatus