EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000007594 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 848 bases
Position: chrJH651596.1:7211313-7212160
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010158	SMN	PF06003.12	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010306	-	579	-	ENSODEP00000010158	192 (aa)	-	-

Gene Model

Click here to download ENSODEG00000007594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007594's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007594	-	100	66.807	ENSG00000119953	SMNDC1	100	69.748	Homo_sapiens
ENSODEG00000007594	-	100	51.681	ENSAPOG00000021772	smndc1	100	53.782	Acanthochromis_polyacanthus
ENSODEG00000007594	-	100	66.387	ENSAMEG00000005251	SMNDC1	100	69.328	Ailuropoda_melanoleuca
ENSODEG00000007594	-	100	53.556	ENSACIG00000004819	smndc1	100	54.202	Amphilophus_citrinellus
ENSODEG00000007594	-	100	51.681	ENSAOCG00000017869	smndc1	100	53.782	Amphiprion_ocellaris
ENSODEG00000007594	-	100	51.681	ENSAPEG00000007752	smndc1	100	53.782	Amphiprion_percula
ENSODEG00000007594	-	100	53.782	ENSATEG00000006830	smndc1	100	55.882	Anabas_testudineus
ENSODEG00000007594	-	87	66.667	ENSAPLG00000004322	SMNDC1	100	70.202	Anas_platyrhynchos
ENSODEG00000007594	-	100	63.445	ENSACAG00000005983	SMNDC1	100	66.387	Anolis_carolinensis
ENSODEG00000007594	-	100	66.387	ENSANAG00000032875	SMNDC1	100	69.328	Aotus_nancymaae
ENSODEG00000007594	-	100	52.941	ENSACLG00000016360	smndc1	100	55.042	Astatotilapia_calliptera
ENSODEG00000007594	-	100	52.743	ENSAMXG00000020310	smndc1	100	54.852	Astyanax_mexicanus
ENSODEG00000007594	-	100	65.966	ENSBTAG00000000551	SMNDC1	100	68.908	Bos_taurus
ENSODEG00000007594	-	100	66.387	ENSCJAG00000018624	SMNDC1	100	69.328	Callithrix_jacchus
ENSODEG00000007594	-	100	66.387	ENSCAFG00000010720	SMNDC1	100	69.328	Canis_familiaris
ENSODEG00000007594	-	100	66.387	ENSCAFG00020011913	SMNDC1	100	69.328	Canis_lupus_dingo
ENSODEG00000007594	-	100	65.966	ENSCHIG00000010604	SMNDC1	99	72.727	Capra_hircus
ENSODEG00000007594	-	100	66.387	ENSTSYG00000026454	SMNDC1	100	69.328	Carlito_syrichta
ENSODEG00000007594	-	81	61.692	ENSCAPG00000009132	SMNDC1	100	65.174	Cavia_aperea
ENSODEG00000007594	-	100	65.966	ENSCPOG00000031666	SMNDC1	100	68.908	Cavia_porcellus
ENSODEG00000007594	-	100	66.387	ENSCCAG00000021793	SMNDC1	100	69.328	Cebus_capucinus
ENSODEG00000007594	-	100	65.966	ENSCATG00000035910	SMNDC1	100	68.908	Cercocebus_atys
ENSODEG00000007594	-	100	66.387	ENSCLAG00000002838	SMNDC1	100	69.328	Chinchilla_lanigera
ENSODEG00000007594	-	100	66.387	ENSCSAG00000005169	SMNDC1	100	69.328	Chlorocebus_sabaeus
ENSODEG00000007594	-	78	62.176	ENSCHOG00000002936	SMNDC1	100	65.803	Choloepus_hoffmanni
ENSODEG00000007594	-	100	64.706	ENSCPBG00000012837	SMNDC1	100	67.647	Chrysemys_picta_bellii
ENSODEG00000007594	-	98	49.091	ENSCANG00000036994	-	98	53.778	Colobus_angolensis_palliatus
ENSODEG00000007594	-	100	66.387	ENSCANG00000031720	-	100	69.328	Colobus_angolensis_palliatus
ENSODEG00000007594	-	100	64.807	ENSCANG00000034620	-	100	65.665	Colobus_angolensis_palliatus
ENSODEG00000007594	-	100	65.966	ENSCGRG00001012973	Smndc1	100	68.908	Cricetulus_griseus_chok1gshd
ENSODEG00000007594	-	100	65.966	ENSCGRG00000012396	Smndc1	100	68.908	Cricetulus_griseus_crigri
ENSODEG00000007594	-	100	52.340	ENSCSEG00000015621	smndc1	100	54.468	Cynoglossus_semilaevis
ENSODEG00000007594	-	100	53.361	ENSCVAG00000020432	smndc1	100	55.462	Cyprinodon_variegatus
ENSODEG00000007594	-	100	54.852	ENSDARG00000056235	smndc1	100	56.962	Danio_rerio
ENSODEG00000007594	-	100	66.387	ENSDNOG00000016387	SMNDC1	83	69.328	Dasypus_novemcinctus
ENSODEG00000007594	-	100	66.387	ENSDORG00000023715	Smndc1	100	69.328	Dipodomys_ordii
ENSODEG00000007594	-	94	30.894	FBgn0039977	CG17454	98	32.500	Drosophila_melanogaster
ENSODEG00000007594	-	100	47.303	ENSEBUG00000010929	smndc1	100	48.963	Eptatretus_burgeri
ENSODEG00000007594	-	100	66.387	ENSEASG00005014930	SMNDC1	100	69.328	Equus_asinus_asinus
ENSODEG00000007594	-	100	66.387	ENSECAG00000029973	SMNDC1	100	69.328	Equus_caballus
ENSODEG00000007594	-	63	95.349	ENSEEUG00000013407	-	70	95.349	Erinaceus_europaeus
ENSODEG00000007594	-	100	53.814	ENSELUG00000000227	smndc1	100	56.780	Esox_lucius
ENSODEG00000007594	-	100	66.387	ENSFCAG00000027353	SMNDC1	100	69.328	Felis_catus
ENSODEG00000007594	-	100	63.866	ENSFALG00000002306	SMNDC1	100	66.807	Ficedula_albicollis
ENSODEG00000007594	-	100	66.387	ENSFDAG00000006468	SMNDC1	100	69.328	Fukomys_damarensis
ENSODEG00000007594	-	100	54.393	ENSFHEG00000020150	smndc1	100	56.485	Fundulus_heteroclitus
ENSODEG00000007594	-	100	52.966	ENSGMOG00000016585	smndc1	100	55.932	Gadus_morhua
ENSODEG00000007594	-	100	63.866	ENSGALG00000008561	SMNDC1	100	66.807	Gallus_gallus
ENSODEG00000007594	-	100	53.138	ENSGAFG00000011582	smndc1	100	55.230	Gambusia_affinis
ENSODEG00000007594	-	100	52.941	ENSGACG00000009468	smndc1	100	54.622	Gasterosteus_aculeatus
ENSODEG00000007594	-	100	64.706	ENSGAGG00000024547	SMNDC1	100	67.647	Gopherus_agassizii
ENSODEG00000007594	-	100	66.387	ENSGGOG00000010071	SMNDC1	99	73.232	Gorilla_gorilla
ENSODEG00000007594	-	100	52.941	ENSHBUG00000017596	smndc1	100	55.042	Haplochromis_burtoni
ENSODEG00000007594	-	100	51.339	ENSHGLG00000001157	-	100	51.339	Heterocephalus_glaber_female
ENSODEG00000007594	-	100	66.387	ENSHGLG00000013390	-	100	69.328	Heterocephalus_glaber_female
ENSODEG00000007594	-	100	58.079	ENSHGLG00100004278	-	100	56.332	Heterocephalus_glaber_male
ENSODEG00000007594	-	100	66.387	ENSHGLG00100004814	-	100	69.328	Heterocephalus_glaber_male
ENSODEG00000007594	-	100	52.720	ENSHCOG00000000783	smndc1	100	54.393	Hippocampus_comes
ENSODEG00000007594	-	100	54.430	ENSIPUG00000004217	smndc1	100	56.540	Ictalurus_punctatus
ENSODEG00000007594	-	100	66.387	ENSSTOG00000006088	SMNDC1	100	69.328	Ictidomys_tridecemlineatus
ENSODEG00000007594	-	100	65.546	ENSJJAG00000019974	Smndc1	100	68.487	Jaculus_jaculus
ENSODEG00000007594	-	100	50.840	ENSKMAG00000020134	smndc1	100	52.941	Kryptolebias_marmoratus
ENSODEG00000007594	-	100	53.165	ENSLBEG00000004598	smndc1	100	54.852	Labrus_bergylta
ENSODEG00000007594	-	100	60.084	ENSLACG00000007784	SMNDC1	100	61.765	Latimeria_chalumnae
ENSODEG00000007594	-	100	58.228	ENSLOCG00000012355	smndc1	100	60.759	Lepisosteus_oculatus
ENSODEG00000007594	-	100	65.966	ENSLAFG00000014353	SMNDC1	100	68.908	Loxodonta_africana
ENSODEG00000007594	-	100	61.751	ENSMFAG00000038381	-	100	61.751	Macaca_fascicularis
ENSODEG00000007594	-	100	66.387	ENSMFAG00000002433	-	100	69.328	Macaca_fascicularis
ENSODEG00000007594	-	100	61.751	ENSMMUG00000045875	-	100	61.751	Macaca_mulatta
ENSODEG00000007594	-	100	66.387	ENSMMUG00000007775	SMNDC1	100	69.328	Macaca_mulatta
ENSODEG00000007594	-	100	62.613	ENSMNEG00000033853	-	100	67.117	Macaca_nemestrina
ENSODEG00000007594	-	100	66.387	ENSMNEG00000042963	-	100	69.328	Macaca_nemestrina
ENSODEG00000007594	-	100	64.103	ENSMLEG00000040236	SMNDC1	100	65.385	Mandrillus_leucophaeus
ENSODEG00000007594	-	84	48.558	ENSMAMG00000018233	smndc1	86	50.476	Mastacembelus_armatus
ENSODEG00000007594	-	100	52.941	ENSMZEG00005027510	smndc1	100	55.042	Maylandia_zebra
ENSODEG00000007594	-	88	66.000	ENSMGAG00000010777	SMNDC1	84	69.500	Meleagris_gallopavo
ENSODEG00000007594	-	100	66.387	ENSMAUG00000012243	-	100	69.328	Mesocricetus_auratus
ENSODEG00000007594	-	99	55.111	ENSMAUG00000005459	-	93	57.333	Mesocricetus_auratus
ENSODEG00000007594	-	100	65.546	ENSMICG00000027336	-	99	72.222	Microcebus_murinus
ENSODEG00000007594	-	100	60.870	ENSMICG00000031640	-	100	60.870	Microcebus_murinus
ENSODEG00000007594	-	100	66.387	ENSMOCG00000002458	Smndc1	100	69.328	Microtus_ochrogaster
ENSODEG00000007594	-	100	52.101	ENSMMOG00000008856	smndc1	100	54.202	Mola_mola
ENSODEG00000007594	-	100	66.807	ENSMODG00000010542	SMNDC1	100	69.748	Monodelphis_domestica
ENSODEG00000007594	-	100	52.941	ENSMALG00000017598	smndc1	100	55.042	Monopterus_albus
ENSODEG00000007594	-	100	65.966	MGP_CAROLIEiJ_G0023072	Smndc1	100	68.908	Mus_caroli
ENSODEG00000007594	-	100	66.387	ENSMUSG00000025024	Smndc1	100	69.328	Mus_musculus
ENSODEG00000007594	-	100	66.387	MGP_PahariEiJ_G0014560	Smndc1	100	69.328	Mus_pahari
ENSODEG00000007594	-	100	66.387	MGP_SPRETEiJ_G0023993	Smndc1	100	69.328	Mus_spretus
ENSODEG00000007594	-	100	66.387	ENSMPUG00000002089	SMNDC1	100	69.328	Mustela_putorius_furo
ENSODEG00000007594	-	100	65.966	ENSMLUG00000016007	SMNDC1	100	68.908	Myotis_lucifugus
ENSODEG00000007594	-	100	66.387	ENSNGAG00000006833	Smndc1	100	69.328	Nannospalax_galili
ENSODEG00000007594	-	100	52.521	ENSNBRG00000017089	smndc1	100	54.622	Neolamprologus_brichardi
ENSODEG00000007594	-	100	66.387	ENSNLEG00000015471	SMNDC1	100	69.328	Nomascus_leucogenys
ENSODEG00000007594	-	86	49.223	ENSMEUG00000010120	-	99	49.223	Notamacropus_eugenii
ENSODEG00000007594	-	100	65.966	ENSOPRG00000015348	SMNDC1	100	68.908	Ochotona_princeps
ENSODEG00000007594	-	100	52.521	ENSONIG00000000434	smndc1	100	54.622	Oreochromis_niloticus
ENSODEG00000007594	-	100	65.546	ENSOANG00000001598	SMNDC1	100	68.487	Ornithorhynchus_anatinus
ENSODEG00000007594	-	100	57.207	ENSOCUG00000012274	-	100	59.910	Oryctolagus_cuniculus
ENSODEG00000007594	-	100	65.546	ENSOCUG00000008145	-	100	68.487	Oryctolagus_cuniculus
ENSODEG00000007594	-	100	53.782	ENSORLG00000005934	smndc1	95	55.882	Oryzias_latipes
ENSODEG00000007594	-	100	53.782	ENSORLG00020008796	smndc1	95	55.882	Oryzias_latipes_hni
ENSODEG00000007594	-	100	53.782	ENSORLG00015013666	smndc1	100	55.882	Oryzias_latipes_hsok
ENSODEG00000007594	-	100	54.852	ENSOMEG00000007590	smndc1	100	56.962	Oryzias_melastigma
ENSODEG00000007594	-	100	65.966	ENSOGAG00000000571	SMNDC1	100	68.908	Otolemur_garnettii
ENSODEG00000007594	-	100	65.966	ENSOARG00000009500	SMNDC1	100	68.908	Ovis_aries
ENSODEG00000007594	-	100	66.387	ENSPPAG00000027815	SMNDC1	99	73.232	Pan_paniscus
ENSODEG00000007594	-	100	66.387	ENSPPRG00000013749	SMNDC1	100	69.328	Panthera_pardus
ENSODEG00000007594	-	100	66.387	ENSPTIG00000011451	SMNDC1	100	69.328	Panthera_tigris_altaica
ENSODEG00000007594	-	100	66.387	ENSPTRG00000002937	SMNDC1	99	73.232	Pan_troglodytes
ENSODEG00000007594	-	100	66.387	ENSPANG00000020805	-	100	69.328	Papio_anubis
ENSODEG00000007594	-	100	67.241	ENSPANG00000031346	-	100	67.241	Papio_anubis
ENSODEG00000007594	-	100	56.962	ENSPKIG00000017164	smndc1	100	58.228	Paramormyrops_kingsleyae
ENSODEG00000007594	-	100	65.126	ENSPSIG00000012257	SMNDC1	100	68.067	Pelodiscus_sinensis
ENSODEG00000007594	-	100	52.119	ENSPMGG00000015651	smndc1	100	54.237	Periophthalmus_magnuspinnatus
ENSODEG00000007594	-	100	66.387	ENSPEMG00000022058	Smndc1	100	69.328	Peromyscus_maniculatus_bairdii
ENSODEG00000007594	-	100	45.902	ENSPMAG00000007705	smndc1	100	47.541	Petromyzon_marinus
ENSODEG00000007594	-	96	47.162	ENSPCIG00000009693	-	100	46.288	Phascolarctos_cinereus
ENSODEG00000007594	-	100	66.807	ENSPCIG00000018419	SMNDC1	100	69.748	Phascolarctos_cinereus
ENSODEG00000007594	-	100	52.101	ENSPFOG00000017113	smndc1	100	54.202	Poecilia_formosa
ENSODEG00000007594	-	100	52.521	ENSPLAG00000010372	smndc1	100	54.622	Poecilia_latipinna
ENSODEG00000007594	-	100	52.101	ENSPMEG00000012288	smndc1	100	54.202	Poecilia_mexicana
ENSODEG00000007594	-	100	51.681	ENSPREG00000012279	smndc1	100	53.782	Poecilia_reticulata
ENSODEG00000007594	-	100	66.387	ENSPPYG00000002643	SMNDC1	100	69.328	Pongo_abelii
ENSODEG00000007594	-	78	62.694	ENSPCAG00000016183	SMNDC1	100	66.321	Procavia_capensis
ENSODEG00000007594	-	100	65.966	ENSPCOG00000024343	SMNDC1	100	68.908	Propithecus_coquereli
ENSODEG00000007594	-	76	73.494	ENSPVAG00000004368	SMNDC1	75	73.494	Pteropus_vampyrus
ENSODEG00000007594	-	87	55.556	ENSPNYG00000024093	smndc1	86	58.081	Pundamilia_nyererei
ENSODEG00000007594	-	100	52.743	ENSPNAG00000025285	smndc1	100	54.852	Pygocentrus_nattereri
ENSODEG00000007594	-	100	65.966	ENSRNOG00000014833	Smndc1	100	68.908	Rattus_norvegicus
ENSODEG00000007594	-	100	66.245	ENSRBIG00000000224	-	100	69.198	Rhinopithecus_bieti
ENSODEG00000007594	-	98	57.778	ENSRBIG00000032452	-	99	60.889	Rhinopithecus_bieti
ENSODEG00000007594	-	98	58.222	ENSRROG00000039125	-	99	61.333	Rhinopithecus_roxellana
ENSODEG00000007594	-	100	66.387	ENSRROG00000044992	-	100	69.328	Rhinopithecus_roxellana
ENSODEG00000007594	-	100	66.387	ENSSBOG00000026789	SMNDC1	99	73.232	Saimiri_boliviensis_boliviensis
ENSODEG00000007594	-	100	66.807	ENSSHAG00000015189	SMNDC1	99	73.737	Sarcophilus_harrisii
ENSODEG00000007594	-	100	56.962	ENSSFOG00015008311	smndc1	100	58.228	Scleropages_formosus
ENSODEG00000007594	-	100	52.941	ENSSMAG00000020118	smndc1	100	54.622	Scophthalmus_maximus
ENSODEG00000007594	-	100	52.941	ENSSDUG00000015330	smndc1	100	55.042	Seriola_dumerili
ENSODEG00000007594	-	100	52.941	ENSSLDG00000017325	smndc1	100	55.042	Seriola_lalandi_dorsalis
ENSODEG00000007594	-	100	65.966	ENSSARG00000006063	SMNDC1	100	68.908	Sorex_araneus
ENSODEG00000007594	-	100	64.286	ENSSPUG00000004574	SMNDC1	100	67.227	Sphenodon_punctatus
ENSODEG00000007594	-	100	52.101	ENSSPAG00000000338	smndc1	100	54.202	Stegastes_partitus
ENSODEG00000007594	-	100	66.387	ENSSSCG00000030507	SMNDC1	99	73.232	Sus_scrofa
ENSODEG00000007594	-	100	63.866	ENSTGUG00000010599	SMNDC1	100	66.807	Taeniopygia_guttata
ENSODEG00000007594	-	100	51.261	ENSTRUG00000023281	smndc1	100	52.521	Takifugu_rubripes
ENSODEG00000007594	-	100	52.521	ENSTNIG00000013331	smndc1	100	53.782	Tetraodon_nigroviridis
ENSODEG00000007594	-	100	65.966	ENSTBEG00000014337	SMNDC1	100	68.908	Tupaia_belangeri
ENSODEG00000007594	-	100	66.387	ENSUAMG00000008142	SMNDC1	99	73.232	Ursus_americanus
ENSODEG00000007594	-	100	66.387	ENSUMAG00000023722	SMNDC1	100	69.328	Ursus_maritimus
ENSODEG00000007594	-	87	69.697	ENSVPAG00000003402	SMNDC1	100	73.232	Vicugna_pacos
ENSODEG00000007594	-	100	66.387	ENSVVUG00000007820	SMNDC1	100	69.328	Vulpes_vulpes
ENSODEG00000007594	-	57	58.462	ENSXETG00000015415	SMNDC1	92	60.000	Xenopus_tropicalis
ENSODEG00000007594	-	100	53.586	ENSXCOG00000009159	smndc1	100	55.274	Xiphophorus_couchianus
ENSODEG00000007594	-	100	52.720	ENSXMAG00000012755	smndc1	100	54.812	Xiphophorus_maculatus