EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000007597 (Gene tree)
Gene ID: 101592130
Gene Symbol: TRNT1
Alias: -
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 20308 bases
Position: chrJH651545.1:17476290-17496597
Accession: 101592130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010161	PolyA_pol	PF01743.20	1.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010309	TRNT1-201	1435	XM_004629526	ENSODEP00000010161	434 (aa)	XP_004629583	UPI000333CB64

Gene Model

Click here to download ENSODEG00000007597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007597	TRNT1	99	92.610	ENSG00000072756	TRNT1	99	92.610	Homo_sapiens
ENSODEG00000007597	TRNT1	93	68.148	ENSAPOG00000013687	trnt1	95	68.148	Acanthochromis_polyacanthus
ENSODEG00000007597	TRNT1	99	89.885	ENSAMEG00000014520	TRNT1	99	89.885	Ailuropoda_melanoleuca
ENSODEG00000007597	TRNT1	98	68.235	ENSACIG00000021706	trnt1	99	68.235	Amphilophus_citrinellus
ENSODEG00000007597	TRNT1	98	67.059	ENSAOCG00000024612	trnt1	99	67.059	Amphiprion_ocellaris
ENSODEG00000007597	TRNT1	97	60.095	ENSAPEG00000022627	trnt1	98	60.095	Amphiprion_percula
ENSODEG00000007597	TRNT1	93	70.720	ENSATEG00000008928	trnt1	99	70.720	Anabas_testudineus
ENSODEG00000007597	TRNT1	89	75.969	ENSAPLG00000004258	TRNT1	96	75.969	Anas_platyrhynchos
ENSODEG00000007597	TRNT1	99	75.058	ENSACAG00000005657	TRNT1	99	75.058	Anolis_carolinensis
ENSODEG00000007597	TRNT1	99	91.686	ENSANAG00000024802	TRNT1	99	91.686	Aotus_nancymaae
ENSODEG00000007597	TRNT1	98	67.529	ENSACLG00000022227	trnt1	99	67.529	Astatotilapia_calliptera
ENSODEG00000007597	TRNT1	94	69.756	ENSAMXG00000003960	trnt1	95	69.756	Astyanax_mexicanus
ENSODEG00000007597	TRNT1	99	89.838	ENSBTAG00000019534	TRNT1	99	89.838	Bos_taurus
ENSODEG00000007597	TRNT1	93	44.153	WBGene00010089	hpo-31	94	44.153	Caenorhabditis_elegans
ENSODEG00000007597	TRNT1	99	91.686	ENSCJAG00000015466	TRNT1	99	91.686	Callithrix_jacchus
ENSODEG00000007597	TRNT1	99	89.376	ENSCAFG00000005985	TRNT1	99	89.376	Canis_familiaris
ENSODEG00000007597	TRNT1	99	89.376	ENSCAFG00020014746	TRNT1	99	89.376	Canis_lupus_dingo
ENSODEG00000007597	TRNT1	99	90.531	ENSCHIG00000007030	TRNT1	99	90.531	Capra_hircus
ENSODEG00000007597	TRNT1	99	92.379	ENSTSYG00000013390	TRNT1	99	92.379	Carlito_syrichta
ENSODEG00000007597	TRNT1	87	76.190	ENSCAPG00000006891	TRNT1	100	76.190	Cavia_aperea
ENSODEG00000007597	TRNT1	100	94.009	ENSCPOG00000007849	TRNT1	100	94.030	Cavia_porcellus
ENSODEG00000007597	TRNT1	95	88.675	ENSCCAG00000002919	TRNT1	99	90.750	Cebus_capucinus
ENSODEG00000007597	TRNT1	100	91.935	ENSCATG00000031985	TRNT1	99	91.935	Cercocebus_atys
ENSODEG00000007597	TRNT1	100	95.622	ENSCLAG00000005186	TRNT1	100	95.622	Chinchilla_lanigera
ENSODEG00000007597	TRNT1	99	92.379	ENSCSAG00000011052	TRNT1	99	92.379	Chlorocebus_sabaeus
ENSODEG00000007597	TRNT1	85	90.099	ENSCHOG00000005712	TRNT1	85	90.099	Choloepus_hoffmanni
ENSODEG00000007597	TRNT1	94	82.064	ENSCPBG00000017636	TRNT1	93	82.064	Chrysemys_picta_bellii
ENSODEG00000007597	TRNT1	93	45.255	ENSCING00000007069	-	99	45.255	Ciona_intestinalis
ENSODEG00000007597	TRNT1	95	46.135	ENSCSAVG00000007494	-	97	46.135	Ciona_savignyi
ENSODEG00000007597	TRNT1	99	91.917	ENSCANG00000039030	TRNT1	99	91.917	Colobus_angolensis_palliatus
ENSODEG00000007597	TRNT1	99	90.762	ENSCGRG00001009998	Trnt1	99	90.762	Cricetulus_griseus_chok1gshd
ENSODEG00000007597	TRNT1	99	90.762	ENSCGRG00000013410	Trnt1	99	90.762	Cricetulus_griseus_crigri
ENSODEG00000007597	TRNT1	94	67.980	ENSCSEG00000008157	trnt1	95	67.980	Cynoglossus_semilaevis
ENSODEG00000007597	TRNT1	94	68.966	ENSCVAG00000019770	trnt1	96	68.966	Cyprinodon_variegatus
ENSODEG00000007597	TRNT1	96	69.378	ENSDARG00000075297	trnt1	96	69.378	Danio_rerio
ENSODEG00000007597	TRNT1	99	89.838	ENSDNOG00000008837	TRNT1	99	89.838	Dasypus_novemcinctus
ENSODEG00000007597	TRNT1	99	88.684	ENSDORG00000014035	Trnt1	99	88.684	Dipodomys_ordii
ENSODEG00000007597	TRNT1	92	49.136	FBgn0037369	CG2100	83	49.136	Drosophila_melanogaster
ENSODEG00000007597	TRNT1	57	87.952	ENSETEG00000018177	TRNT1	100	87.952	Echinops_telfairi
ENSODEG00000007597	TRNT1	93	62.779	ENSEBUG00000012779	-	95	62.779	Eptatretus_burgeri
ENSODEG00000007597	TRNT1	99	91.455	ENSEASG00005003577	TRNT1	99	91.455	Equus_asinus_asinus
ENSODEG00000007597	TRNT1	99	91.686	ENSECAG00000014420	TRNT1	99	91.686	Equus_caballus
ENSODEG00000007597	TRNT1	99	87.529	ENSEEUG00000009567	TRNT1	99	87.529	Erinaceus_europaeus
ENSODEG00000007597	TRNT1	99	66.589	ENSELUG00000003802	trnt1	99	66.589	Esox_lucius
ENSODEG00000007597	TRNT1	99	89.376	ENSFCAG00000026805	TRNT1	99	89.376	Felis_catus
ENSODEG00000007597	TRNT1	88	74.219	ENSFALG00000013539	TRNT1	99	74.219	Ficedula_albicollis
ENSODEG00000007597	TRNT1	100	94.700	ENSFDAG00000018412	TRNT1	100	94.700	Fukomys_damarensis
ENSODEG00000007597	TRNT1	96	66.667	ENSFHEG00000019294	trnt1	99	66.667	Fundulus_heteroclitus
ENSODEG00000007597	TRNT1	93	67.654	ENSGMOG00000007460	trnt1	95	67.654	Gadus_morhua
ENSODEG00000007597	TRNT1	93	74.321	ENSGALG00000017368	TRNT1	94	74.321	Gallus_gallus
ENSODEG00000007597	TRNT1	96	66.903	ENSGAFG00000008647	trnt1	99	66.903	Gambusia_affinis
ENSODEG00000007597	TRNT1	98	65.176	ENSGACG00000011903	trnt1	99	65.176	Gasterosteus_aculeatus
ENSODEG00000007597	TRNT1	99	79.070	ENSGAGG00000020942	TRNT1	97	79.070	Gopherus_agassizii
ENSODEG00000007597	TRNT1	99	92.841	ENSGGOG00000015286	TRNT1	99	92.841	Gorilla_gorilla
ENSODEG00000007597	TRNT1	98	67.529	ENSHBUG00000002797	trnt1	99	67.529	Haplochromis_burtoni
ENSODEG00000007597	TRNT1	100	94.470	ENSHGLG00000003649	TRNT1	100	94.470	Heterocephalus_glaber_female
ENSODEG00000007597	TRNT1	100	88.736	ENSHGLG00000000221	-	100	88.736	Heterocephalus_glaber_female
ENSODEG00000007597	TRNT1	100	93.318	ENSHGLG00100016421	TRNT1	100	93.318	Heterocephalus_glaber_male
ENSODEG00000007597	TRNT1	94	67.734	ENSHCOG00000010618	trnt1	95	67.734	Hippocampus_comes
ENSODEG00000007597	TRNT1	96	68.193	ENSIPUG00000000971	trnt1	96	68.193	Ictalurus_punctatus
ENSODEG00000007597	TRNT1	99	87.760	ENSSTOG00000000150	TRNT1	98	92.079	Ictidomys_tridecemlineatus
ENSODEG00000007597	TRNT1	99	90.531	ENSJJAG00000018561	Trnt1	99	90.531	Jaculus_jaculus
ENSODEG00000007597	TRNT1	96	67.453	ENSKMAG00000011307	trnt1	99	67.453	Kryptolebias_marmoratus
ENSODEG00000007597	TRNT1	94	62.927	ENSLBEG00000019457	trnt1	97	62.927	Labrus_bergylta
ENSODEG00000007597	TRNT1	99	72.979	ENSLACG00000013227	TRNT1	99	72.979	Latimeria_chalumnae
ENSODEG00000007597	TRNT1	98	69.930	ENSLOCG00000011105	trnt1	98	69.930	Lepisosteus_oculatus
ENSODEG00000007597	TRNT1	99	92.379	ENSLAFG00000023191	TRNT1	99	92.379	Loxodonta_africana
ENSODEG00000007597	TRNT1	100	92.166	ENSMFAG00000045113	TRNT1	99	92.166	Macaca_fascicularis
ENSODEG00000007597	TRNT1	100	92.166	ENSMMUG00000017983	TRNT1	99	92.166	Macaca_mulatta
ENSODEG00000007597	TRNT1	100	92.166	ENSMNEG00000037805	TRNT1	99	92.166	Macaca_nemestrina
ENSODEG00000007597	TRNT1	88	93.455	ENSMLEG00000033671	TRNT1	99	93.455	Mandrillus_leucophaeus
ENSODEG00000007597	TRNT1	98	67.294	ENSMAMG00000023401	trnt1	99	67.294	Mastacembelus_armatus
ENSODEG00000007597	TRNT1	98	67.529	ENSMZEG00005009141	trnt1	99	67.529	Maylandia_zebra
ENSODEG00000007597	TRNT1	74	73.438	ENSMGAG00000009971	TRNT1	99	73.438	Meleagris_gallopavo
ENSODEG00000007597	TRNT1	99	90.993	ENSMAUG00000020707	Trnt1	99	90.993	Mesocricetus_auratus
ENSODEG00000007597	TRNT1	99	91.224	ENSMICG00000016615	TRNT1	99	91.224	Microcebus_murinus
ENSODEG00000007597	TRNT1	99	90.300	ENSMOCG00000004539	Trnt1	99	90.300	Microtus_ochrogaster
ENSODEG00000007597	TRNT1	98	66.353	ENSMMOG00000010742	trnt1	99	66.353	Mola_mola
ENSODEG00000007597	TRNT1	99	83.141	ENSMODG00000004368	TRNT1	99	83.141	Monodelphis_domestica
ENSODEG00000007597	TRNT1	98	66.118	ENSMALG00000008376	trnt1	99	66.118	Monopterus_albus
ENSODEG00000007597	TRNT1	99	91.455	MGP_CAROLIEiJ_G0028698	Trnt1	99	91.455	Mus_caroli
ENSODEG00000007597	TRNT1	99	91.455	ENSMUSG00000013736	Trnt1	99	91.455	Mus_musculus
ENSODEG00000007597	TRNT1	99	91.224	MGP_PahariEiJ_G0022449	Trnt1	100	93.103	Mus_pahari
ENSODEG00000007597	TRNT1	99	91.455	MGP_SPRETEiJ_G0029726	Trnt1	99	91.455	Mus_spretus
ENSODEG00000007597	TRNT1	99	90.762	ENSMPUG00000017017	TRNT1	99	90.762	Mustela_putorius_furo
ENSODEG00000007597	TRNT1	89	87.273	ENSMLUG00000011864	TRNT1	99	87.273	Myotis_lucifugus
ENSODEG00000007597	TRNT1	99	90.531	ENSNGAG00000000537	Trnt1	99	90.531	Nannospalax_galili
ENSODEG00000007597	TRNT1	79	67.246	ENSNBRG00000023606	trnt1	99	67.246	Neolamprologus_brichardi
ENSODEG00000007597	TRNT1	99	92.610	ENSNLEG00000003226	TRNT1	99	92.610	Nomascus_leucogenys
ENSODEG00000007597	TRNT1	99	82.448	ENSMEUG00000004684	TRNT1	99	82.448	Notamacropus_eugenii
ENSODEG00000007597	TRNT1	88	80.208	ENSOPRG00000015067	TRNT1	99	80.208	Ochotona_princeps
ENSODEG00000007597	TRNT1	98	67.529	ENSONIG00000020273	trnt1	98	67.529	Oreochromis_niloticus
ENSODEG00000007597	TRNT1	99	74.306	ENSOANG00000007514	TRNT1	99	74.306	Ornithorhynchus_anatinus
ENSODEG00000007597	TRNT1	99	84.758	ENSOCUG00000008580	TRNT1	99	84.758	Oryctolagus_cuniculus
ENSODEG00000007597	TRNT1	94	67.734	ENSORLG00000003165	trnt1	96	67.734	Oryzias_latipes
ENSODEG00000007597	TRNT1	94	67.734	ENSORLG00020022060	trnt1	96	67.734	Oryzias_latipes_hni
ENSODEG00000007597	TRNT1	96	64.858	ENSORLG00015018915	trnt1	99	64.858	Oryzias_latipes_hsok
ENSODEG00000007597	TRNT1	95	65.777	ENSOMEG00000003331	trnt1	97	65.777	Oryzias_melastigma
ENSODEG00000007597	TRNT1	99	90.300	ENSOARG00000008631	TRNT1	99	90.300	Ovis_aries
ENSODEG00000007597	TRNT1	99	92.841	ENSPPAG00000043566	TRNT1	99	92.841	Pan_paniscus
ENSODEG00000007597	TRNT1	99	89.607	ENSPPRG00000001327	TRNT1	99	89.607	Panthera_pardus
ENSODEG00000007597	TRNT1	99	89.607	ENSPTIG00000011448	TRNT1	99	89.607	Panthera_tigris_altaica
ENSODEG00000007597	TRNT1	99	92.841	ENSPTRG00000014564	TRNT1	99	92.841	Pan_troglodytes
ENSODEG00000007597	TRNT1	100	91.935	ENSPANG00000025944	TRNT1	99	91.935	Papio_anubis
ENSODEG00000007597	TRNT1	95	70.120	ENSPKIG00000020015	trnt1	96	70.120	Paramormyrops_kingsleyae
ENSODEG00000007597	TRNT1	91	80.303	ENSPSIG00000017356	TRNT1	99	81.944	Pelodiscus_sinensis
ENSODEG00000007597	TRNT1	98	66.824	ENSPMGG00000008888	trnt1	98	66.824	Periophthalmus_magnuspinnatus
ENSODEG00000007597	TRNT1	99	91.686	ENSPEMG00000019845	Trnt1	99	91.686	Peromyscus_maniculatus_bairdii
ENSODEG00000007597	TRNT1	99	82.679	ENSPCIG00000030436	TRNT1	99	82.679	Phascolarctos_cinereus
ENSODEG00000007597	TRNT1	99	65.893	ENSPFOG00000006194	trnt1	99	65.893	Poecilia_formosa
ENSODEG00000007597	TRNT1	99	65.893	ENSPLAG00000015623	trnt1	99	68.238	Poecilia_latipinna
ENSODEG00000007597	TRNT1	99	65.893	ENSPMEG00000012216	trnt1	99	68.238	Poecilia_mexicana
ENSODEG00000007597	TRNT1	96	66.667	ENSPREG00000021470	trnt1	99	66.667	Poecilia_reticulata
ENSODEG00000007597	TRNT1	99	92.610	ENSPPYG00000013702	TRNT1	99	92.610	Pongo_abelii
ENSODEG00000007597	TRNT1	88	90.601	ENSPCAG00000001951	TRNT1	100	90.601	Procavia_capensis
ENSODEG00000007597	TRNT1	99	92.841	ENSPCOG00000022228	TRNT1	99	92.841	Propithecus_coquereli
ENSODEG00000007597	TRNT1	88	89.556	ENSPVAG00000008784	TRNT1	99	89.556	Pteropus_vampyrus
ENSODEG00000007597	TRNT1	98	67.529	ENSPNYG00000003120	trnt1	99	67.529	Pundamilia_nyererei
ENSODEG00000007597	TRNT1	98	68.065	ENSPNAG00000000565	trnt1	99	68.065	Pygocentrus_nattereri
ENSODEG00000007597	TRNT1	99	91.455	ENSRNOG00000006432	Trnt1	99	91.455	Rattus_norvegicus
ENSODEG00000007597	TRNT1	99	89.607	ENSRBIG00000042632	TRNT1	99	89.607	Rhinopithecus_bieti
ENSODEG00000007597	TRNT1	99	91.686	ENSRROG00000036866	TRNT1	99	91.686	Rhinopithecus_roxellana
ENSODEG00000007597	TRNT1	99	91.686	ENSSBOG00000021208	TRNT1	99	91.686	Saimiri_boliviensis_boliviensis
ENSODEG00000007597	TRNT1	99	81.986	ENSSHAG00000018861	TRNT1	99	81.986	Sarcophilus_harrisii
ENSODEG00000007597	TRNT1	93	70.617	ENSSFOG00015020844	trnt1	94	70.617	Scleropages_formosus
ENSODEG00000007597	TRNT1	98	67.294	ENSSMAG00000015432	trnt1	97	67.294	Scophthalmus_maximus
ENSODEG00000007597	TRNT1	98	66.588	ENSSDUG00000012320	trnt1	99	66.588	Seriola_dumerili
ENSODEG00000007597	TRNT1	56	63.900	ENSSLDG00000016463	-	96	61.660	Seriola_lalandi_dorsalis
ENSODEG00000007597	TRNT1	98	66.588	ENSSLDG00000009325	trnt1	99	66.588	Seriola_lalandi_dorsalis
ENSODEG00000007597	TRNT1	88	81.462	ENSSPUG00000014153	TRNT1	99	81.462	Sphenodon_punctatus
ENSODEG00000007597	TRNT1	98	65.882	ENSSPAG00000021005	trnt1	99	65.882	Stegastes_partitus
ENSODEG00000007597	TRNT1	99	90.993	ENSSSCG00000011529	TRNT1	99	90.993	Sus_scrofa
ENSODEG00000007597	TRNT1	93	74.568	ENSTGUG00000010192	TRNT1	99	74.568	Taeniopygia_guttata
ENSODEG00000007597	TRNT1	98	67.294	ENSTRUG00000001088	trnt1	99	67.294	Takifugu_rubripes
ENSODEG00000007597	TRNT1	99	66.821	ENSTNIG00000007363	trnt1	99	66.821	Tetraodon_nigroviridis
ENSODEG00000007597	TRNT1	70	76.030	ENSTBEG00000006367	TRNT1	100	76.030	Tupaia_belangeri
ENSODEG00000007597	TRNT1	99	89.838	ENSTTRG00000007803	TRNT1	99	89.838	Tursiops_truncatus
ENSODEG00000007597	TRNT1	99	89.376	ENSUAMG00000022574	TRNT1	99	89.376	Ursus_americanus
ENSODEG00000007597	TRNT1	99	89.838	ENSUMAG00000024092	TRNT1	99	89.838	Ursus_maritimus
ENSODEG00000007597	TRNT1	99	89.607	ENSVVUG00000012810	TRNT1	99	89.607	Vulpes_vulpes
ENSODEG00000007597	TRNT1	98	64.336	ENSXETG00000025091	trnt1	99	66.418	Xenopus_tropicalis
ENSODEG00000007597	TRNT1	96	66.667	ENSXCOG00000010150	trnt1	99	66.667	Xiphophorus_couchianus
ENSODEG00000007597	TRNT1	96	66.430	ENSXMAG00000002227	trnt1	99	66.430	Xiphophorus_maculatus