EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000007599 (Gene tree)
Gene ID: 101591876
Gene Symbol: -
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 5327 bases
Position: chrJH651543.1:7887168-7892494
Accession: 101591876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010163	Ribosomal_S18	PF01084.20	1.4e-22	1	1
ENSODEP00000010164	Ribosomal_S18	PF01084.20	3.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010311	-	441	XM_004629179	ENSODEP00000010163	146 (aa)	XP_004629236	-
ENSODET00000010313	-	276	XM_012514283	ENSODEP00000010165	92 (aa)	XP_012369737	-
ENSODET00000010312	-	393	-	ENSODEP00000010164	130 (aa)	-	-

Gene Model

Click here to download ENSODEG00000007599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007599's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000007599	-	100	97.945	ENSODEG00000020349	-	100	97.945
ENSODEG00000007599	-	70	30.556	ENSODEG00000015388	MRPS18A	54	30.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007599	-	100	82.192	ENSG00000163319	MRPS18C	100	82.192	Homo_sapiens
ENSODEG00000007599	-	100	73.288	ENSAMEG00000004915	MRPS18C	100	73.288	Ailuropoda_melanoleuca
ENSODEG00000007599	-	99	70.395	ENSANAG00000025323	-	95	70.395	Aotus_nancymaae
ENSODEG00000007599	-	100	70.548	ENSANAG00000028055	-	100	70.548	Aotus_nancymaae
ENSODEG00000007599	-	100	76.027	ENSBTAG00000018155	MRPS18C	100	76.027	Bos_taurus
ENSODEG00000007599	-	100	54.110	ENSBTAG00000049836	-	100	54.110	Bos_taurus
ENSODEG00000007599	-	100	80.137	ENSCJAG00000042247	MRPS18C	97	80.137	Callithrix_jacchus
ENSODEG00000007599	-	100	78.767	ENSCAFG00020010491	MRPS18C	100	78.767	Canis_lupus_dingo
ENSODEG00000007599	-	100	65.753	ENSCHIG00000022740	-	100	65.753	Capra_hircus
ENSODEG00000007599	-	86	66.964	ENSCHIG00000019359	-	100	66.964	Capra_hircus
ENSODEG00000007599	-	91	81.203	ENSCHIG00000004461	-	91	81.203	Capra_hircus
ENSODEG00000007599	-	100	63.014	ENSCHIG00000018805	-	100	63.014	Capra_hircus
ENSODEG00000007599	-	100	50.000	ENSCHIG00000016551	-	100	50.000	Capra_hircus
ENSODEG00000007599	-	100	79.452	ENSTSYG00000012924	MRPS18C	100	79.452	Carlito_syrichta
ENSODEG00000007599	-	100	82.192	ENSCPOG00000009198	MRPS18C	100	82.192	Cavia_porcellus
ENSODEG00000007599	-	99	68.276	ENSCCAG00000025155	-	95	68.276	Cebus_capucinus
ENSODEG00000007599	-	100	69.863	ENSCCAG00000028283	-	100	69.863	Cebus_capucinus
ENSODEG00000007599	-	100	79.452	ENSCCAG00000026577	-	100	79.452	Cebus_capucinus
ENSODEG00000007599	-	100	77.397	ENSCCAG00000019347	-	100	77.397	Cebus_capucinus
ENSODEG00000007599	-	100	81.507	ENSCATG00000040697	MRPS18C	100	81.507	Cercocebus_atys
ENSODEG00000007599	-	100	88.356	ENSCLAG00000008205	-	100	88.356	Chinchilla_lanigera
ENSODEG00000007599	-	100	88.356	ENSCLAG00000017397	-	100	88.356	Chinchilla_lanigera
ENSODEG00000007599	-	100	81.507	ENSCANG00000038907	MRPS18C	100	81.507	Colobus_angolensis_palliatus
ENSODEG00000007599	-	99	60.690	ENSCANG00000037347	-	100	58.219	Colobus_angolensis_palliatus
ENSODEG00000007599	-	100	67.808	ENSCANG00000041165	-	100	67.808	Colobus_angolensis_palliatus
ENSODEG00000007599	-	100	78.767	ENSCGRG00001000103	Mrps18c	100	78.767	Cricetulus_griseus_chok1gshd
ENSODEG00000007599	-	100	78.767	ENSCGRG00000002192	Mrps18c	100	78.767	Cricetulus_griseus_crigri
ENSODEG00000007599	-	99	77.083	ENSDORG00000012749	Mrps18c	100	77.083	Dipodomys_ordii
ENSODEG00000007599	-	100	50.000	ENSETEG00000012223	-	100	50.000	Echinops_telfairi
ENSODEG00000007599	-	100	82.192	ENSEASG00005013234	MRPS18C	100	82.192	Equus_asinus_asinus
ENSODEG00000007599	-	100	82.877	ENSECAG00000020387	MRPS18C	100	82.877	Equus_caballus
ENSODEG00000007599	-	100	56.164	ENSEEUG00000003504	MRPS18C	99	56.164	Erinaceus_europaeus
ENSODEG00000007599	-	100	80.822	ENSFCAG00000042464	MRPS18C	100	80.822	Felis_catus
ENSODEG00000007599	-	100	73.288	ENSFDAG00000008778	-	100	73.288	Fukomys_damarensis
ENSODEG00000007599	-	100	83.562	ENSFDAG00000000250	-	100	83.562	Fukomys_damarensis
ENSODEG00000007599	-	100	69.863	ENSGGOG00000008603	MRPS18C	100	69.863	Gorilla_gorilla
ENSODEG00000007599	-	100	60.274	ENSGGOG00000040785	-	100	60.274	Gorilla_gorilla
ENSODEG00000007599	-	100	56.164	ENSGGOG00000037903	-	100	56.164	Gorilla_gorilla
ENSODEG00000007599	-	100	78.767	ENSHGLG00000012671	-	98	78.767	Heterocephalus_glaber_female
ENSODEG00000007599	-	100	86.986	ENSHGLG00000002953	-	100	86.986	Heterocephalus_glaber_female
ENSODEG00000007599	-	100	81.507	ENSHGLG00000020134	-	100	81.507	Heterocephalus_glaber_female
ENSODEG00000007599	-	100	81.507	ENSHGLG00100019678	-	100	81.507	Heterocephalus_glaber_male
ENSODEG00000007599	-	100	78.767	ENSHGLG00100015568	-	98	78.767	Heterocephalus_glaber_male
ENSODEG00000007599	-	100	86.986	ENSHGLG00100016235	-	100	86.986	Heterocephalus_glaber_male
ENSODEG00000007599	-	100	82.877	ENSSTOG00000007989	MRPS18C	100	82.877	Ictidomys_tridecemlineatus
ENSODEG00000007599	-	100	78.767	ENSLAFG00000001059	MRPS18C	100	78.767	Loxodonta_africana
ENSODEG00000007599	-	100	80.822	ENSMFAG00000003991	MRPS18C	100	80.822	Macaca_fascicularis
ENSODEG00000007599	-	100	66.438	ENSMFAG00000041276	-	100	66.438	Macaca_fascicularis
ENSODEG00000007599	-	100	73.288	ENSMMUG00000048717	-	100	73.288	Macaca_mulatta
ENSODEG00000007599	-	100	72.603	ENSMMUG00000039146	-	100	72.603	Macaca_mulatta
ENSODEG00000007599	-	100	63.699	ENSMMUG00000015353	MRPS18C	100	63.699	Macaca_mulatta
ENSODEG00000007599	-	100	62.329	ENSMNEG00000018700	-	100	62.329	Macaca_nemestrina
ENSODEG00000007599	-	100	80.822	ENSMNEG00000043663	MRPS18C	100	80.822	Macaca_nemestrina
ENSODEG00000007599	-	100	81.507	ENSMLEG00000038884	MRPS18C	100	81.507	Mandrillus_leucophaeus
ENSODEG00000007599	-	100	58.904	ENSMICG00000037615	-	100	58.904	Microcebus_murinus
ENSODEG00000007599	-	100	76.712	ENSMICG00000032609	-	100	76.712	Microcebus_murinus
ENSODEG00000007599	-	100	78.082	ENSMOCG00000015591	-	100	78.082	Microtus_ochrogaster
ENSODEG00000007599	-	100	76.712	ENSMOCG00000009898	-	100	76.712	Microtus_ochrogaster
ENSODEG00000007599	-	99	69.444	ENSMODG00000020773	MRPS18C	100	69.444	Monodelphis_domestica
ENSODEG00000007599	-	100	75.342	MGP_CAROLIEiJ_G0027458	Mrps18c	100	75.342	Mus_caroli
ENSODEG00000007599	-	100	75.342	ENSMUSG00000016833	Mrps18c	100	75.342	Mus_musculus
ENSODEG00000007599	-	100	76.027	MGP_PahariEiJ_G0017236	Mrps18c	100	76.027	Mus_pahari
ENSODEG00000007599	-	98	70.866	MGP_SPRETEiJ_G0028455	Mrps18c	97	70.866	Mus_spretus
ENSODEG00000007599	-	100	77.397	ENSMLUG00000017057	MRPS18C	100	77.397	Myotis_lucifugus
ENSODEG00000007599	-	86	84.127	ENSNGAG00000015980	Mrps18c	100	80.822	Nannospalax_galili
ENSODEG00000007599	-	100	81.507	ENSNLEG00000009119	MRPS18C	100	81.507	Nomascus_leucogenys
ENSODEG00000007599	-	100	76.027	ENSNLEG00000018188	-	100	76.027	Nomascus_leucogenys
ENSODEG00000007599	-	78	78.218	ENSOPRG00000004113	MRPS18C	68	78.218	Ochotona_princeps
ENSODEG00000007599	-	100	76.712	ENSOARG00000002770	MRPS18C	100	76.712	Ovis_aries
ENSODEG00000007599	-	100	82.192	ENSPPAG00000037122	MRPS18C	100	82.192	Pan_paniscus
ENSODEG00000007599	-	100	56.164	ENSPPAG00000037400	-	100	56.164	Pan_paniscus
ENSODEG00000007599	-	100	80.137	ENSPPRG00000011089	MRPS18C	100	80.137	Panthera_pardus
ENSODEG00000007599	-	100	79.452	ENSPTIG00000021242	MRPS18C	100	79.452	Panthera_tigris_altaica
ENSODEG00000007599	-	100	54.110	ENSPTRG00000047058	-	100	54.110	Pan_troglodytes
ENSODEG00000007599	-	100	82.192	ENSPTRG00000016233	MRPS18C	100	82.192	Pan_troglodytes
ENSODEG00000007599	-	100	72.603	ENSPANG00000034202	-	100	72.603	Papio_anubis
ENSODEG00000007599	-	100	81.507	ENSPANG00000033931	MRPS18C	100	81.507	Papio_anubis
ENSODEG00000007599	-	100	76.027	ENSPEMG00000008390	Mrps18c	100	76.027	Peromyscus_maniculatus_bairdii
ENSODEG00000007599	-	75	70.909	ENSPCIG00000000097	-	78	70.909	Phascolarctos_cinereus
ENSODEG00000007599	-	70	85.294	ENSPCIG00000019737	-	100	85.294	Phascolarctos_cinereus
ENSODEG00000007599	-	99	68.750	ENSPCIG00000005376	-	100	68.750	Phascolarctos_cinereus
ENSODEG00000007599	-	100	82.877	ENSPPYG00000025867	MRPS18C	100	82.877	Pongo_abelii
ENSODEG00000007599	-	99	77.931	ENSPPYG00000025835	-	100	77.931	Pongo_abelii
ENSODEG00000007599	-	100	74.658	ENSPCAG00000004975	MRPS18C	100	74.658	Procavia_capensis
ENSODEG00000007599	-	100	79.730	ENSPCOG00000017634	MRPS18C	100	79.730	Propithecus_coquereli
ENSODEG00000007599	-	78	78.218	ENSPVAG00000006439	MRPS18C	100	78.218	Pteropus_vampyrus
ENSODEG00000007599	-	100	74.658	ENSRNOG00000002178	Mrps18c	100	74.658	Rattus_norvegicus
ENSODEG00000007599	-	100	71.233	ENSRBIG00000035023	-	100	71.233	Rhinopithecus_bieti
ENSODEG00000007599	-	100	54.110	ENSRBIG00000031637	-	100	54.110	Rhinopithecus_bieti
ENSODEG00000007599	-	100	81.507	ENSRBIG00000041685	MRPS18C	100	81.507	Rhinopithecus_bieti
ENSODEG00000007599	-	100	54.795	ENSRROG00000030722	-	100	54.795	Rhinopithecus_roxellana
ENSODEG00000007599	-	100	81.507	ENSRROG00000044334	MRPS18C	100	81.507	Rhinopithecus_roxellana
ENSODEG00000007599	-	100	71.233	ENSRROG00000033834	-	100	71.233	Rhinopithecus_roxellana
ENSODEG00000007599	-	92	68.148	ENSSBOG00000032292	-	97	68.148	Saimiri_boliviensis_boliviensis
ENSODEG00000007599	-	100	61.644	ENSSBOG00000029234	-	100	61.644	Saimiri_boliviensis_boliviensis
ENSODEG00000007599	-	100	78.767	ENSSBOG00000027568	-	100	78.767	Saimiri_boliviensis_boliviensis
ENSODEG00000007599	-	99	71.724	ENSSBOG00000022205	-	92	71.724	Saimiri_boliviensis_boliviensis
ENSODEG00000007599	-	92	73.529	ENSSHAG00000007084	MRPS18C	94	73.529	Sarcophilus_harrisii
ENSODEG00000007599	-	100	80.137	ENSSSCG00000038042	MRPS18C	100	80.137	Sus_scrofa
ENSODEG00000007599	-	100	80.137	ENSTBEG00000012505	MRPS18C	100	80.137	Tupaia_belangeri
ENSODEG00000007599	-	100	81.507	ENSTTRG00000004897	MRPS18C	100	81.507	Tursiops_truncatus
ENSODEG00000007599	-	100	84.247	ENSUAMG00000012878	MRPS18C	100	84.247	Ursus_americanus
ENSODEG00000007599	-	100	84.247	ENSUMAG00000008829	MRPS18C	100	84.247	Ursus_maritimus
ENSODEG00000007599	-	100	81.507	ENSVPAG00000011358	MRPS18C	100	81.507	Vicugna_pacos
ENSODEG00000007599	-	100	79.452	ENSVVUG00000015672	MRPS18C	100	79.452	Vulpes_vulpes