EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000007612 (Gene tree)
Gene ID: 101587063
Gene Symbol: RNPC3
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 25050 bases
Position: chrJH651599.1:7976486-8001535
Accession: 101587063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010183	RRM_1	PF00076.22	8.9e-17	1	2
ENSODEP00000010183	RRM_1	PF00076.22	8.9e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010331	RNPC3-201	1551	XM_004636969	ENSODEP00000010183	516 (aa)	XP_004637026	UPI000C9EEF05

Gene Model

Click here to download ENSODEG00000007612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007612	RNPC3	100	89.147	ENSG00000185946	RNPC3	100	90.811	Homo_sapiens
ENSODEG00000007612	RNPC3	95	55.040	ENSAPOG00000017371	rnpc3	97	56.740	Acanthochromis_polyacanthus
ENSODEG00000007612	RNPC3	98	88.802	ENSAMEG00000001694	RNPC3	100	87.885	Ailuropoda_melanoleuca
ENSODEG00000007612	RNPC3	95	52.705	ENSACIG00000021043	rnpc3	97	52.705	Amphilophus_citrinellus
ENSODEG00000007612	RNPC3	95	54.800	ENSAOCG00000014052	rnpc3	95	56.487	Amphiprion_ocellaris
ENSODEG00000007612	RNPC3	95	54.600	ENSAPEG00000008739	rnpc3	95	56.287	Amphiprion_percula
ENSODEG00000007612	RNPC3	95	54.491	ENSATEG00000021263	rnpc3	97	54.491	Anabas_testudineus
ENSODEG00000007612	RNPC3	87	69.604	ENSAPLG00000015605	RNPC3	99	70.925	Anas_platyrhynchos
ENSODEG00000007612	RNPC3	95	67.683	ENSACAG00000002029	RNPC3	96	68.072	Anolis_carolinensis
ENSODEG00000007612	RNPC3	100	88.395	ENSANAG00000019950	RNPC3	100	88.395	Aotus_nancymaae
ENSODEG00000007612	RNPC3	95	53.347	ENSACLG00000014702	rnpc3	96	53.036	Astatotilapia_calliptera
ENSODEG00000007612	RNPC3	94	57.831	ENSAMXG00000033372	rnpc3	96	57.831	Astyanax_mexicanus
ENSODEG00000007612	RNPC3	100	87.209	ENSBTAG00000019091	RNPC3	100	87.209	Bos_taurus
ENSODEG00000007612	RNPC3	100	84.913	ENSCJAG00000035686	RNPC3	100	84.526	Callithrix_jacchus
ENSODEG00000007612	RNPC3	100	88.224	ENSCAFG00000019972	RNPC3	100	88.224	Canis_familiaris
ENSODEG00000007612	RNPC3	100	88.417	ENSCAFG00020011300	RNPC3	100	88.417	Canis_lupus_dingo
ENSODEG00000007612	RNPC3	100	87.234	ENSCHIG00000020361	RNPC3	100	87.234	Capra_hircus
ENSODEG00000007612	RNPC3	100	87.016	ENSTSYG00000030256	RNPC3	100	87.016	Carlito_syrichta
ENSODEG00000007612	RNPC3	84	82.069	ENSCAPG00000013600	RNPC3	97	82.051	Cavia_aperea
ENSODEG00000007612	RNPC3	100	92.456	ENSCPOG00000031638	RNPC3	100	92.456	Cavia_porcellus
ENSODEG00000007612	RNPC3	100	88.781	ENSCCAG00000024301	RNPC3	100	88.781	Cebus_capucinus
ENSODEG00000007612	RNPC3	98	68.836	ENSCATG00000035930	-	99	68.836	Cercocebus_atys
ENSODEG00000007612	RNPC3	99	88.738	ENSCATG00000002086	RNPC3	99	88.738	Cercocebus_atys
ENSODEG00000007612	RNPC3	100	91.085	ENSCLAG00000005169	RNPC3	100	91.473	Chinchilla_lanigera
ENSODEG00000007612	RNPC3	99	88.544	ENSCSAG00000001519	RNPC3	99	88.544	Chlorocebus_sabaeus
ENSODEG00000007612	RNPC3	95	69.819	ENSCPBG00000028311	RNPC3	95	70.221	Chrysemys_picta_bellii
ENSODEG00000007612	RNPC3	95	38.552	ENSCING00000021276	-	100	39.208	Ciona_intestinalis
ENSODEG00000007612	RNPC3	93	38.509	ENSCSAVG00000002800	-	100	39.834	Ciona_savignyi
ENSODEG00000007612	RNPC3	99	88.544	ENSCANG00000031444	RNPC3	99	88.544	Colobus_angolensis_palliatus
ENSODEG00000007612	RNPC3	99	86.019	ENSCGRG00001019276	Rnpc3	100	86.019	Cricetulus_griseus_chok1gshd
ENSODEG00000007612	RNPC3	87	86.918	ENSCGRG00000000053	Rnpc3	100	86.918	Cricetulus_griseus_crigri
ENSODEG00000007612	RNPC3	94	53.170	ENSCSEG00000013475	rnpc3	96	54.898	Cynoglossus_semilaevis
ENSODEG00000007612	RNPC3	94	53.707	ENSCVAG00000002645	rnpc3	97	53.373	Cyprinodon_variegatus
ENSODEG00000007612	RNPC3	95	56.827	ENSDARG00000011247	rnpc3	93	65.318	Danio_rerio
ENSODEG00000007612	RNPC3	100	86.434	ENSDNOG00000047498	-	100	86.434	Dasypus_novemcinctus
ENSODEG00000007612	RNPC3	100	86.822	ENSDNOG00000044555	-	100	86.822	Dasypus_novemcinctus
ENSODEG00000007612	RNPC3	99	86.434	ENSDORG00000027343	Rnpc3	99	86.434	Dipodomys_ordii
ENSODEG00000007612	RNPC3	95	48.024	ENSEBUG00000002068	rnpc3	97	47.036	Eptatretus_burgeri
ENSODEG00000007612	RNPC3	100	87.838	ENSEASG00005015957	RNPC3	100	87.838	Equus_asinus_asinus
ENSODEG00000007612	RNPC3	100	88.417	ENSECAG00000021148	RNPC3	100	88.417	Equus_caballus
ENSODEG00000007612	RNPC3	95	53.398	ENSELUG00000002264	rnpc3	97	53.786	Esox_lucius
ENSODEG00000007612	RNPC3	100	87.814	ENSFCAG00000024312	RNPC3	100	87.814	Felis_catus
ENSODEG00000007612	RNPC3	87	72.247	ENSFALG00000002580	RNPC3	99	73.206	Ficedula_albicollis
ENSODEG00000007612	RNPC3	99	90.891	ENSFDAG00000019948	RNPC3	100	90.891	Fukomys_damarensis
ENSODEG00000007612	RNPC3	95	50.503	ENSFHEG00000020647	rnpc3	98	49.608	Fundulus_heteroclitus
ENSODEG00000007612	RNPC3	95	53.521	ENSGMOG00000019213	rnpc3	95	53.386	Gadus_morhua
ENSODEG00000007612	RNPC3	95	72.323	ENSGALG00000005162	RNPC3	89	72.323	Gallus_gallus
ENSODEG00000007612	RNPC3	95	52.834	ENSGAFG00000017236	rnpc3	96	52.834	Gambusia_affinis
ENSODEG00000007612	RNPC3	95	54.806	ENSGACG00000002048	rnpc3	96	52.692	Gasterosteus_aculeatus
ENSODEG00000007612	RNPC3	95	69.618	ENSGAGG00000008438	RNPC3	95	70.221	Gopherus_agassizii
ENSODEG00000007612	RNPC3	99	72.407	ENSGGOG00000026201	-	99	71.930	Gorilla_gorilla
ENSODEG00000007612	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSODEG00000007612	RNPC3	100	89.942	ENSHGLG00000001708	RNPC3	100	89.942	Heterocephalus_glaber_female
ENSODEG00000007612	RNPC3	100	89.942	ENSHGLG00100003005	RNPC3	100	89.942	Heterocephalus_glaber_male
ENSODEG00000007612	RNPC3	95	53.535	ENSHCOG00000017135	rnpc3	97	54.839	Hippocampus_comes
ENSODEG00000007612	RNPC3	95	56.478	ENSIPUG00000002916	rnpc3	97	56.522	Ictalurus_punctatus
ENSODEG00000007612	RNPC3	100	87.427	ENSSTOG00000025020	RNPC3	100	87.427	Ictidomys_tridecemlineatus
ENSODEG00000007612	RNPC3	95	84.929	ENSJJAG00000010203	Rnpc3	100	83.721	Jaculus_jaculus
ENSODEG00000007612	RNPC3	95	54.175	ENSKMAG00000017358	rnpc3	97	54.291	Kryptolebias_marmoratus
ENSODEG00000007612	RNPC3	95	54.509	ENSLBEG00000024901	rnpc3	95	56.200	Labrus_bergylta
ENSODEG00000007612	RNPC3	95	61.972	ENSLACG00000005720	RNPC3	90	62.374	Latimeria_chalumnae
ENSODEG00000007612	RNPC3	95	59.016	ENSLOCG00000007986	rnpc3	96	60.736	Lepisosteus_oculatus
ENSODEG00000007612	RNPC3	99	85.659	ENSLAFG00000032342	RNPC3	100	85.659	Loxodonta_africana
ENSODEG00000007612	RNPC3	99	88.544	ENSMFAG00000002004	RNPC3	99	88.544	Macaca_fascicularis
ENSODEG00000007612	RNPC3	99	64.062	ENSMFAG00000002917	-	99	65.483	Macaca_fascicularis
ENSODEG00000007612	RNPC3	82	80.930	ENSMMUG00000002098	-	98	65.415	Macaca_mulatta
ENSODEG00000007612	RNPC3	99	88.544	ENSMMUG00000018039	RNPC3	99	88.544	Macaca_mulatta
ENSODEG00000007612	RNPC3	98	60.947	ENSMNEG00000029209	-	99	65.226	Macaca_nemestrina
ENSODEG00000007612	RNPC3	99	83.689	ENSMNEG00000033950	RNPC3	99	83.689	Macaca_nemestrina
ENSODEG00000007612	RNPC3	98	67.057	ENSMLEG00000034644	-	98	67.251	Mandrillus_leucophaeus
ENSODEG00000007612	RNPC3	99	88.738	ENSMLEG00000033628	RNPC3	99	88.738	Mandrillus_leucophaeus
ENSODEG00000007612	RNPC3	95	51.406	ENSMAMG00000007496	rnpc3	97	50.877	Mastacembelus_armatus
ENSODEG00000007612	RNPC3	95	52.883	ENSMZEG00005020233	rnpc3	97	52.579	Maylandia_zebra
ENSODEG00000007612	RNPC3	87	70.769	ENSMGAG00000006381	RNPC3	99	71.868	Meleagris_gallopavo
ENSODEG00000007612	RNPC3	96	86.720	ENSMAUG00000001358	Rnpc3	100	85.825	Mesocricetus_auratus
ENSODEG00000007612	RNPC3	99	88.760	ENSMICG00000029591	RNPC3	99	88.760	Microcebus_murinus
ENSODEG00000007612	RNPC3	97	86.373	ENSMOCG00000013423	Rnpc3	100	85.300	Microtus_ochrogaster
ENSODEG00000007612	RNPC3	95	50.400	ENSMMOG00000005309	rnpc3	97	51.085	Mola_mola
ENSODEG00000007612	RNPC3	99	75.194	ENSMODG00000002946	RNPC3	99	75.194	Monodelphis_domestica
ENSODEG00000007612	RNPC3	95	51.600	ENSMALG00000015471	rnpc3	97	51.600	Monopterus_albus
ENSODEG00000007612	RNPC3	99	84.466	MGP_CAROLIEiJ_G0025555	Rnpc3	100	84.466	Mus_caroli
ENSODEG00000007612	RNPC3	99	84.660	ENSMUSG00000027981	Rnpc3	100	84.660	Mus_musculus
ENSODEG00000007612	RNPC3	99	84.660	MGP_PahariEiJ_G0027001	Rnpc3	100	84.660	Mus_pahari
ENSODEG00000007612	RNPC3	99	84.660	MGP_SPRETEiJ_G0026505	Rnpc3	100	84.660	Mus_spretus
ENSODEG00000007612	RNPC3	100	88.247	ENSMPUG00000007349	RNPC3	100	88.247	Mustela_putorius_furo
ENSODEG00000007612	RNPC3	100	85.687	ENSMLUG00000028743	RNPC3	100	85.687	Myotis_lucifugus
ENSODEG00000007612	RNPC3	99	86.770	ENSNGAG00000010939	Rnpc3	99	86.770	Nannospalax_galili
ENSODEG00000007612	RNPC3	95	52.834	ENSNBRG00000012196	rnpc3	93	52.834	Neolamprologus_brichardi
ENSODEG00000007612	RNPC3	100	88.760	ENSNLEG00000012013	RNPC3	100	88.760	Nomascus_leucogenys
ENSODEG00000007612	RNPC3	95	53.753	ENSONIG00000004770	rnpc3	99	55.172	Oreochromis_niloticus
ENSODEG00000007612	RNPC3	90	76.344	ENSOANG00000008220	RNPC3	99	77.204	Ornithorhynchus_anatinus
ENSODEG00000007612	RNPC3	100	87.234	ENSOCUG00000004016	RNPC3	100	87.234	Oryctolagus_cuniculus
ENSODEG00000007612	RNPC3	95	53.252	ENSORLG00000005694	rnpc3	97	55.375	Oryzias_latipes
ENSODEG00000007612	RNPC3	95	53.753	ENSORLG00020005513	rnpc3	97	55.578	Oryzias_latipes_hni
ENSODEG00000007612	RNPC3	95	53.252	ENSORLG00015002179	rnpc3	97	55.375	Oryzias_latipes_hsok
ENSODEG00000007612	RNPC3	95	54.251	ENSOMEG00000017737	rnpc3	97	56.566	Oryzias_melastigma
ENSODEG00000007612	RNPC3	100	88.008	ENSOGAG00000026182	RNPC3	100	88.008	Otolemur_garnettii
ENSODEG00000007612	RNPC3	100	87.234	ENSOARG00000018719	RNPC3	100	87.234	Ovis_aries
ENSODEG00000007612	RNPC3	100	88.803	ENSPPAG00000037459	RNPC3	100	88.803	Pan_paniscus
ENSODEG00000007612	RNPC3	100	72.727	ENSPPAG00000030278	-	100	72.727	Pan_paniscus
ENSODEG00000007612	RNPC3	100	88.201	ENSPPRG00000020246	RNPC3	100	88.201	Panthera_pardus
ENSODEG00000007612	RNPC3	98	88.757	ENSPTIG00000009887	RNPC3	100	88.757	Panthera_tigris_altaica
ENSODEG00000007612	RNPC3	100	72.147	ENSPTRG00000044227	-	100	72.147	Pan_troglodytes
ENSODEG00000007612	RNPC3	100	88.781	ENSPTRG00000033902	RNPC3	100	88.781	Pan_troglodytes
ENSODEG00000007612	RNPC3	99	88.911	ENSPANG00000012137	RNPC3	99	88.911	Papio_anubis
ENSODEG00000007612	RNPC3	98	69.941	ENSPANG00000029957	-	100	70.138	Papio_anubis
ENSODEG00000007612	RNPC3	95	53.200	ENSPKIG00000008828	rnpc3	95	52.087	Paramormyrops_kingsleyae
ENSODEG00000007612	RNPC3	63	69.277	ENSPSIG00000007396	RNPC3	99	69.880	Pelodiscus_sinensis
ENSODEG00000007612	RNPC3	93	50.920	ENSPMGG00000011742	rnpc3	95	51.738	Periophthalmus_magnuspinnatus
ENSODEG00000007612	RNPC3	88	85.526	ENSPEMG00000020112	Rnpc3	100	86.253	Peromyscus_maniculatus_bairdii
ENSODEG00000007612	RNPC3	96	44.444	ENSPMAG00000003778	rnpc3	98	44.933	Petromyzon_marinus
ENSODEG00000007612	RNPC3	99	75.000	ENSPCIG00000004415	-	99	75.000	Phascolarctos_cinereus
ENSODEG00000007612	RNPC3	96	52.008	ENSPFOG00000009895	rnpc3	97	52.227	Poecilia_formosa
ENSODEG00000007612	RNPC3	96	51.807	ENSPLAG00000012023	rnpc3	97	52.024	Poecilia_latipinna
ENSODEG00000007612	RNPC3	96	52.305	ENSPMEG00000003663	rnpc3	97	52.429	Poecilia_mexicana
ENSODEG00000007612	RNPC3	96	52.008	ENSPREG00000010206	rnpc3	97	52.121	Poecilia_reticulata
ENSODEG00000007612	RNPC3	84	85.023	ENSPPYG00000001102	RNPC3	99	85.023	Pongo_abelii
ENSODEG00000007612	RNPC3	95	53.144	ENSPNYG00000020603	rnpc3	96	52.834	Pundamilia_nyererei
ENSODEG00000007612	RNPC3	96	54.331	ENSPNAG00000000524	rnpc3	89	55.070	Pygocentrus_nattereri
ENSODEG00000007612	RNPC3	99	84.272	ENSRNOG00000017310	Rnpc3	100	84.272	Rattus_norvegicus
ENSODEG00000007612	RNPC3	99	83.527	ENSRBIG00000043897	RNPC3	99	83.527	Rhinopithecus_bieti
ENSODEG00000007612	RNPC3	99	88.932	ENSRROG00000032334	RNPC3	99	88.932	Rhinopithecus_roxellana
ENSODEG00000007612	RNPC3	100	87.984	ENSSBOG00000024473	RNPC3	100	87.984	Saimiri_boliviensis_boliviensis
ENSODEG00000007612	RNPC3	99	75.194	ENSSHAG00000011859	RNPC3	99	75.194	Sarcophilus_harrisii
ENSODEG00000007612	RNPC3	96	58.071	ENSSFOG00015013055	rnpc3	96	59.200	Scleropages_formosus
ENSODEG00000007612	RNPC3	95	52.200	ENSSMAG00000020346	rnpc3	97	52.132	Scophthalmus_maximus
ENSODEG00000007612	RNPC3	95	54.582	ENSSDUG00000006600	rnpc3	96	54.600	Seriola_dumerili
ENSODEG00000007612	RNPC3	95	54.781	ENSSLDG00000007979	rnpc3	96	54.781	Seriola_lalandi_dorsalis
ENSODEG00000007612	RNPC3	96	64.930	ENSSPUG00000003872	-	94	64.800	Sphenodon_punctatus
ENSODEG00000007612	RNPC3	95	69.980	ENSSPUG00000008539	-	94	70.385	Sphenodon_punctatus
ENSODEG00000007612	RNPC3	95	54.065	ENSSPAG00000005633	rnpc3	97	54.183	Stegastes_partitus
ENSODEG00000007612	RNPC3	100	87.403	ENSSSCG00000037254	RNPC3	100	87.984	Sus_scrofa
ENSODEG00000007612	RNPC3	87	70.640	ENSTGUG00000004795	-	99	70.640	Taeniopygia_guttata
ENSODEG00000007612	RNPC3	95	53.737	ENSTNIG00000018963	rnpc3	97	53.737	Tetraodon_nigroviridis
ENSODEG00000007612	RNPC3	98	89.567	ENSUMAG00000007775	RNPC3	100	89.567	Ursus_maritimus
ENSODEG00000007612	RNPC3	100	88.417	ENSVVUG00000000331	RNPC3	100	88.417	Vulpes_vulpes
ENSODEG00000007612	RNPC3	97	49.706	ENSXETG00000025027	rnpc3	99	49.706	Xenopus_tropicalis
ENSODEG00000007612	RNPC3	96	51.683	ENSXCOG00000005013	rnpc3	97	50.485	Xiphophorus_couchianus
ENSODEG00000007612	RNPC3	96	52.200	ENSXMAG00000006495	rnpc3	97	52.419	Xiphophorus_maculatus