EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000007646 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 9722 bases
Position: chrJH651599.1:3058257-3067978
Accession: 101578405
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010233	PRP38	PF03371.15	5.4e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010381	PRPF38B-201	3638	XM_004636949	ENSODEP00000010233	435 (aa)	XP_004637006	-

Gene Model

Click here to download ENSODEG00000007646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007646	PRPF38B	97	95.724	ENSCJAG00000002510	-	100	95.862	Callithrix_jacchus
ENSODEG00000007646	PRPF38B	97	92.874	ENSTSYG00000029817	PRPF38B	100	93.103	Carlito_syrichta
ENSODEG00000007646	PRPF38B	100	96.552	ENSCCAG00000033941	-	80	96.552	Cebus_capucinus
ENSODEG00000007646	PRPF38B	100	96.552	ENSCSAG00000001531	PRPF38B	80	96.552	Chlorocebus_sabaeus
ENSODEG00000007646	PRPF38B	100	96.782	ENSCANG00000027711	PRPF38B	80	96.782	Colobus_angolensis_palliatus
ENSODEG00000007646	PRPF38B	97	95.962	ENSLAFG00000017112	PRPF38B	80	96.092	Loxodonta_africana
ENSODEG00000007646	PRPF38B	100	96.782	ENSMMUG00000010155	PRPF38B	80	96.782	Macaca_mulatta
ENSODEG00000007646	PRPF38B	100	96.552	ENSMNEG00000032003	-	80	96.552	Macaca_nemestrina
ENSODEG00000007646	PRPF38B	97	95.249	ENSMICG00000032109	PRPF38B	80	95.402	Microcebus_murinus
ENSODEG00000007646	PRPF38B	97	95.962	ENSOCUG00000027424	PRPF38B	96	96.092	Oryctolagus_cuniculus
ENSODEG00000007646	PRPF38B	97	95.962	ENSPPYG00000001092	PRPF38B	80	96.092	Pongo_abelii
ENSODEG00000007646	PRPF38B	97	95.487	ENSPCOG00000016051	PRPF38B	80	95.632	Propithecus_coquereli
ENSODEG00000007646	PRPF38B	100	96.322	ENSRBIG00000043351	PRPF38B	80	96.322	Rhinopithecus_bieti
ENSODEG00000007646	PRPF38B	100	96.322	ENSRROG00000029232	PRPF38B	80	96.322	Rhinopithecus_roxellana