EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000007653 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 7156 bases
Position: chrJH651655.1:6602857-6610012
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010241	ResIII	PF04851.15	1.2e-05	1	1
ENSODEP00000010241	DEAD	PF00270.29	3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010389	-	1017	-	ENSODEP00000010241	338 (aa)	-	-

Gene Model

Click here to download ENSODEG00000007653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000007653	-	80	35.897	ENSODEG00000012713	-	67	35.897
ENSODEG00000007653	-	81	33.935	ENSODEG00000019523	-	73	32.198
ENSODEG00000007653	-	83	31.802	ENSODEG00000014238	DDX19A	62	31.802
ENSODEG00000007653	-	58	32.663	ENSODEG00000018638	-	61	32.663
ENSODEG00000007653	-	80	30.325	ENSODEG00000011203	DDX49	56	30.325
ENSODEG00000007653	-	56	30.729	ENSODEG00000019586	-	64	30.729
ENSODEG00000007653	-	81	33.935	ENSODEG00000009068	-	73	32.198
ENSODEG00000007653	-	81	34.783	ENSODEG00000018083	DDX39B	63	34.783
ENSODEG00000007653	-	74	34.783	ENSODEG00000006150	-	65	34.783
ENSODEG00000007653	-	87	32.542	ENSODEG00000007950	DDX6	59	32.542
ENSODEG00000007653	-	83	31.560	ENSODEG00000014050	-	56	31.095
ENSODEG00000007653	-	82	35.125	ENSODEG00000010300	EIF4A3	85	31.765
ENSODEG00000007653	-	58	32.161	ENSODEG00000019833	-	61	32.161
ENSODEG00000007653	-	82	32.500	ENSODEG00000017817	-	75	31.212
ENSODEG00000007653	-	83	34.982	ENSODEG00000017512	-	66	35.231
ENSODEG00000007653	-	51	38.372	ENSODEG00000005642	-	85	38.372
ENSODEG00000007653	-	83	30.690	ENSODEG00000004301	DDX25	57	30.690

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007653	-	98	91.265	ENSG00000064703	DDX20	87	84.167	Homo_sapiens
ENSODEG00000007653	-	91	95.114	ENSCAFG00020008055	DDX20	92	95.114	Canis_lupus_dingo
ENSODEG00000007653	-	90	61.311	ENSCSAVG00000003045	-	75	61.311	Ciona_savignyi
ENSODEG00000007653	-	89	67.333	ENSEBUG00000004479	ddx20	95	67.333	Eptatretus_burgeri
ENSODEG00000007653	-	93	93.610	ENSOPRG00000004035	DDX20	51	89.851	Ochotona_princeps
ENSODEG00000007653	-	76	92.218	ENSPTIG00000021955	-	90	92.218	Panthera_tigris_altaica
ENSODEG00000007653	-	63	71.163	ENSPMAG00000009633	-	99	71.163	Petromyzon_marinus
ENSODEG00000007653	-	70	88.034	ENSPCAG00000007371	-	54	88.034	Procavia_capensis
ENSODEG00000007653	-	98	86.667	ENSUAMG00000018924	DDX20	60	88.197	Ursus_americanus