EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000007709 (Gene tree)
Gene ID: 101569167
Gene Symbol: SYNJ2
Alias: -
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 108068 bases
Position: chrJH651539.1:5339655-5447722
Accession: 101569167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010320	Exo_endo_phos	PF03372.23	5.3e-13	1	1
ENSODEP00000010321	Exo_endo_phos	PF03372.23	5.3e-13	1	1
ENSODEP00000010322	Exo_endo_phos	PF03372.23	5.1e-08	1	1
ENSODEP00000010323	DUF1866	PF08952.11	6.5e-61	1	1
ENSODEP00000010320	DUF1866	PF08952.11	4.7e-60	1	1
ENSODEP00000010321	DUF1866	PF08952.11	4.7e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010470	SYNJ2-201	4500	XM_004628506	ENSODEP00000010320	1499 (aa)	XP_004628563	UPI000C9FDAF9
ENSODET00000010471	SYNJ2-202	4338	-	ENSODEP00000010321	1445 (aa)	XP_023567949	UPI000C9FF5BB
ENSODET00000010472	SYNJ2-203	1509	-	ENSODEP00000010322	502 (aa)	-	-
ENSODET00000010473	SYNJ2-204	1161	-	ENSODEP00000010323	386 (aa)	-	-

Gene Model

Click here to download ENSODEG00000007709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000007709	SYNJ2	90	61.404	ENSODEG00000002409	-	100	58.764

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007709	SYNJ2	94	92.979	ENSG00000078269	SYNJ2	99	91.111	Homo_sapiens
ENSODEG00000007709	SYNJ2	94	91.702	ENSAMEG00000009581	SYNJ2	100	80.780	Ailuropoda_melanoleuca
ENSODEG00000007709	SYNJ2	94	85.350	ENSAPLG00000002563	SYNJ2	99	69.514	Anas_platyrhynchos
ENSODEG00000007709	SYNJ2	94	82.766	ENSACAG00000004945	SYNJ2	94	70.090	Anolis_carolinensis
ENSODEG00000007709	SYNJ2	94	93.191	ENSANAG00000026575	SYNJ2	97	90.525	Aotus_nancymaae
ENSODEG00000007709	SYNJ2	94	89.641	ENSBTAG00000000817	SYNJ2	100	82.212	Bos_taurus
ENSODEG00000007709	SYNJ2	94	92.979	ENSCJAG00000003570	SYNJ2	97	90.764	Callithrix_jacchus
ENSODEG00000007709	SYNJ2	94	92.553	ENSCAFG00000000644	SYNJ2	100	84.710	Canis_familiaris
ENSODEG00000007709	SYNJ2	94	92.553	ENSCAFG00020015809	SYNJ2	98	87.931	Canis_lupus_dingo
ENSODEG00000007709	SYNJ2	94	89.362	ENSCHIG00000011077	SYNJ2	100	82.621	Capra_hircus
ENSODEG00000007709	SYNJ2	94	92.766	ENSTSYG00000014342	SYNJ2	94	90.849	Carlito_syrichta
ENSODEG00000007709	SYNJ2	100	95.337	ENSCAPG00000000287	SYNJ2	100	95.337	Cavia_aperea
ENSODEG00000007709	SYNJ2	100	95.855	ENSCPOG00000009144	SYNJ2	100	95.855	Cavia_porcellus
ENSODEG00000007709	SYNJ2	94	92.340	ENSCCAG00000025484	SYNJ2	97	90.287	Cebus_capucinus
ENSODEG00000007709	SYNJ2	94	93.191	ENSCATG00000042943	SYNJ2	97	90.374	Cercocebus_atys
ENSODEG00000007709	SYNJ2	100	96.114	ENSCLAG00000004730	SYNJ2	100	94.930	Chinchilla_lanigera
ENSODEG00000007709	SYNJ2	94	92.766	ENSCSAG00000013130	SYNJ2	100	86.216	Chlorocebus_sabaeus
ENSODEG00000007709	SYNJ2	52	97.297	ENSCHOG00000000343	-	52	97.297	Choloepus_hoffmanni
ENSODEG00000007709	SYNJ2	94	86.200	ENSCPBG00000016273	SYNJ2	98	71.834	Chrysemys_picta_bellii
ENSODEG00000007709	SYNJ2	94	92.979	ENSCANG00000040349	SYNJ2	97	90.328	Colobus_angolensis_palliatus
ENSODEG00000007709	SYNJ2	94	94.268	ENSCGRG00001004257	Synj2	97	93.029	Cricetulus_griseus_chok1gshd
ENSODEG00000007709	SYNJ2	100	89.637	ENSCGRG00000001656	Synj2	100	90.415	Cricetulus_griseus_crigri
ENSODEG00000007709	SYNJ2	93	84.648	ENSDNOG00000015900	SYNJ2	96	81.790	Dasypus_novemcinctus
ENSODEG00000007709	SYNJ2	94	92.357	ENSDORG00000014128	Synj2	97	84.379	Dipodomys_ordii
ENSODEG00000007709	SYNJ2	82	91.667	ENSETEG00000017418	SYNJ2	82	91.667	Echinops_telfairi
ENSODEG00000007709	SYNJ2	94	91.915	ENSEASG00005018902	SYNJ2	100	85.961	Equus_asinus_asinus
ENSODEG00000007709	SYNJ2	94	91.489	ENSECAG00000012646	SYNJ2	94	85.600	Equus_caballus
ENSODEG00000007709	SYNJ2	61	75.000	ENSEEUG00000015796	-	58	75.484	Erinaceus_europaeus
ENSODEG00000007709	SYNJ2	94	91.277	ENSFCAG00000010854	SYNJ2	97	88.862	Felis_catus
ENSODEG00000007709	SYNJ2	94	82.166	ENSFALG00000012593	SYNJ2	99	67.718	Ficedula_albicollis
ENSODEG00000007709	SYNJ2	100	93.782	ENSFDAG00000016352	SYNJ2	100	93.782	Fukomys_damarensis
ENSODEG00000007709	SYNJ2	94	84.289	ENSGALG00000013727	SYNJ2	92	73.957	Gallus_gallus
ENSODEG00000007709	SYNJ2	94	85.775	ENSGAGG00000009857	SYNJ2	98	71.240	Gopherus_agassizii
ENSODEG00000007709	SYNJ2	94	92.979	ENSGGOG00000012210	SYNJ2	97	90.374	Gorilla_gorilla
ENSODEG00000007709	SYNJ2	100	94.560	ENSHGLG00000007534	SYNJ2	100	92.195	Heterocephalus_glaber_female
ENSODEG00000007709	SYNJ2	100	94.560	ENSHGLG00100009973	SYNJ2	100	94.560	Heterocephalus_glaber_male
ENSODEG00000007709	SYNJ2	94	95.117	ENSSTOG00000016474	SYNJ2	99	88.655	Ictidomys_tridecemlineatus
ENSODEG00000007709	SYNJ2	94	94.480	ENSJJAG00000014436	Synj2	97	87.976	Jaculus_jaculus
ENSODEG00000007709	SYNJ2	93	75.476	ENSLACG00000007316	SYNJ2	99	69.023	Latimeria_chalumnae
ENSODEG00000007709	SYNJ2	94	90.870	ENSLAFG00000011979	SYNJ2	100	83.608	Loxodonta_africana
ENSODEG00000007709	SYNJ2	94	93.191	ENSMFAG00000040552	SYNJ2	100	91.250	Macaca_fascicularis
ENSODEG00000007709	SYNJ2	94	93.191	ENSMMUG00000007153	SYNJ2	96	90.462	Macaca_mulatta
ENSODEG00000007709	SYNJ2	94	93.191	ENSMNEG00000017211	SYNJ2	97	90.294	Macaca_nemestrina
ENSODEG00000007709	SYNJ2	94	93.191	ENSMLEG00000024911	SYNJ2	100	83.035	Mandrillus_leucophaeus
ENSODEG00000007709	SYNJ2	94	81.800	ENSMGAG00000012839	SYNJ2	99	74.348	Meleagris_gallopavo
ENSODEG00000007709	SYNJ2	100	89.637	ENSMAUG00000022212	Synj2	100	90.415	Mesocricetus_auratus
ENSODEG00000007709	SYNJ2	100	84.361	ENSMICG00000015804	SYNJ2	97	87.978	Microcebus_murinus
ENSODEG00000007709	SYNJ2	100	90.415	ENSMOCG00000020054	Synj2	99	91.760	Microtus_ochrogaster
ENSODEG00000007709	SYNJ2	94	91.915	ENSMODG00000007783	SYNJ2	100	79.274	Monodelphis_domestica
ENSODEG00000007709	SYNJ2	100	88.601	MGP_CAROLIEiJ_G0021026	Synj2	100	93.182	Mus_caroli
ENSODEG00000007709	SYNJ2	100	88.860	ENSMUSG00000023805	Synj2	100	93.636	Mus_musculus
ENSODEG00000007709	SYNJ2	100	88.860	MGP_PahariEiJ_G0023344	Synj2	100	93.333	Mus_pahari
ENSODEG00000007709	SYNJ2	100	87.824	MGP_SPRETEiJ_G0021931	Synj2	100	93.030	Mus_spretus
ENSODEG00000007709	SYNJ2	94	87.660	ENSMPUG00000005323	SYNJ2	98	85.714	Mustela_putorius_furo
ENSODEG00000007709	SYNJ2	94	90.213	ENSMLUG00000000324	SYNJ2	100	82.085	Myotis_lucifugus
ENSODEG00000007709	SYNJ2	100	89.896	ENSNGAG00000014859	Synj2	98	93.017	Nannospalax_galili
ENSODEG00000007709	SYNJ2	94	89.662	ENSNLEG00000010750	SYNJ2	97	86.677	Nomascus_leucogenys
ENSODEG00000007709	SYNJ2	92	83.498	ENSMEUG00000003493	SYNJ2	95	83.498	Notamacropus_eugenii
ENSODEG00000007709	SYNJ2	94	87.872	ENSOPRG00000009648	SYNJ2	93	81.053	Ochotona_princeps
ENSODEG00000007709	SYNJ2	90	65.000	ENSOANG00000029828	-	99	63.024	Ornithorhynchus_anatinus
ENSODEG00000007709	SYNJ2	94	88.723	ENSOCUG00000004762	SYNJ2	100	83.741	Oryctolagus_cuniculus
ENSODEG00000007709	SYNJ2	94	91.702	ENSOGAG00000000488	SYNJ2	100	87.564	Otolemur_garnettii
ENSODEG00000007709	SYNJ2	94	89.641	ENSOARG00000004304	SYNJ2	100	81.403	Ovis_aries
ENSODEG00000007709	SYNJ2	94	93.191	ENSPPAG00000028831	SYNJ2	99	85.743	Pan_paniscus
ENSODEG00000007709	SYNJ2	94	91.277	ENSPPRG00000009068	SYNJ2	97	88.782	Panthera_pardus
ENSODEG00000007709	SYNJ2	94	90.851	ENSPTIG00000018780	SYNJ2	94	88.714	Panthera_tigris_altaica
ENSODEG00000007709	SYNJ2	94	93.191	ENSPTRG00000018739	SYNJ2	100	90.238	Pan_troglodytes
ENSODEG00000007709	SYNJ2	94	93.191	ENSPANG00000010755	SYNJ2	97	90.453	Papio_anubis
ENSODEG00000007709	SYNJ2	94	85.563	ENSPSIG00000014659	SYNJ2	98	70.055	Pelodiscus_sinensis
ENSODEG00000007709	SYNJ2	100	91.192	ENSPEMG00000006247	Synj2	100	91.192	Peromyscus_maniculatus_bairdii
ENSODEG00000007709	SYNJ2	94	91.489	ENSPCIG00000010179	SYNJ2	100	79.855	Phascolarctos_cinereus
ENSODEG00000007709	SYNJ2	94	93.404	ENSPPYG00000017130	SYNJ2	100	85.686	Pongo_abelii
ENSODEG00000007709	SYNJ2	87	91.935	ENSPCAG00000009217	SYNJ2	86	91.935	Procavia_capensis
ENSODEG00000007709	SYNJ2	100	85.951	ENSPCOG00000026910	SYNJ2	97	90.127	Propithecus_coquereli
ENSODEG00000007709	SYNJ2	100	80.984	ENSPVAG00000006131	SYNJ2	100	80.613	Pteropus_vampyrus
ENSODEG00000007709	SYNJ2	100	89.896	ENSRNOG00000017114	Synj2	97	90.789	Rattus_norvegicus
ENSODEG00000007709	SYNJ2	94	92.766	ENSRBIG00000044126	SYNJ2	100	84.548	Rhinopithecus_bieti
ENSODEG00000007709	SYNJ2	94	92.979	ENSRROG00000027755	SYNJ2	97	90.294	Rhinopithecus_roxellana
ENSODEG00000007709	SYNJ2	94	92.553	ENSSBOG00000034876	SYNJ2	97	90.366	Saimiri_boliviensis_boliviensis
ENSODEG00000007709	SYNJ2	94	91.489	ENSSHAG00000018881	SYNJ2	100	79.529	Sarcophilus_harrisii
ENSODEG00000007709	SYNJ2	94	85.319	ENSSPUG00000000491	SYNJ2	95	71.965	Sphenodon_punctatus
ENSODEG00000007709	SYNJ2	94	91.702	ENSSSCG00000012315	SYNJ2	97	89.663	Sus_scrofa
ENSODEG00000007709	SYNJ2	94	80.287	ENSTGUG00000011082	SYNJ2	100	73.294	Taeniopygia_guttata
ENSODEG00000007709	SYNJ2	90	74.627	ENSTBEG00000015827	SYNJ2	85	82.583	Tupaia_belangeri
ENSODEG00000007709	SYNJ2	100	78.814	ENSTTRG00000009677	SYNJ2	100	79.214	Tursiops_truncatus
ENSODEG00000007709	SYNJ2	94	85.805	ENSUAMG00000026577	-	88	85.805	Ursus_americanus
ENSODEG00000007709	SYNJ2	90	76.531	ENSUAMG00000021958	-	98	76.747	Ursus_americanus
ENSODEG00000007709	SYNJ2	94	85.957	ENSUMAG00000012826	SYNJ2	96	86.583	Ursus_maritimus
ENSODEG00000007709	SYNJ2	94	87.677	ENSVVUG00000007407	SYNJ2	100	88.257	Vulpes_vulpes
ENSODEG00000007709	SYNJ2	94	76.483	ENSXETG00000034066	synj2	87	66.084	Xenopus_tropicalis