EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000007803 (Gene tree)
Gene ID: 101563288
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 8533 bases
Position: chrJH651604.1:2591587-2600119
Accession: 101563288
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010451	RRM_1	PF00076.22	1e-29	1	2
ENSODEP00000010451	RRM_1	PF00076.22	1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010602	-	1770	XM_004637391	ENSODEP00000010451	589 (aa)	-	-

Gene Model

Click here to download ENSODEG00000007803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007803's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000007803	-	69	88.806	ENSODEG00000002441	-	84	88.889
ENSODEG00000007803	-	90	79.310	ENSODEG00000003281	-	99	80.218
ENSODEG00000007803	-	90	71.971	ENSODEG00000002748	-	99	72.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007803	-	90	63.978	ENSG00000115053	NCL	100	66.265	Homo_sapiens
ENSODEG00000007803	-	56	63.303	ENSAMEG00000016289	NCL	91	66.195	Ailuropoda_melanoleuca
ENSODEG00000007803	-	90	63.799	ENSANAG00000035814	-	99	64.087	Aotus_nancymaae
ENSODEG00000007803	-	99	57.576	ENSANAG00000024378	-	75	81.102	Aotus_nancymaae
ENSODEG00000007803	-	57	75.000	ENSBTAG00000026909	-	92	74.265	Bos_taurus
ENSODEG00000007803	-	94	63.790	ENSBTAG00000016174	NCL	69	71.667	Bos_taurus
ENSODEG00000007803	-	57	71.324	ENSBTAG00000050728	-	77	72.059	Bos_taurus
ENSODEG00000007803	-	88	66.857	ENSBTAG00000051320	-	74	69.291	Bos_taurus
ENSODEG00000007803	-	90	62.278	ENSCJAG00000013538	NCL	99	64.087	Callithrix_jacchus
ENSODEG00000007803	-	100	65.841	ENSCAFG00000011037	NCL	99	66.195	Canis_familiaris
ENSODEG00000007803	-	82	65.637	ENSCAFG00020023145	NCL	89	65.830	Canis_lupus_dingo
ENSODEG00000007803	-	56	71.324	ENSCHIG00000021052	-	89	74.265	Capra_hircus
ENSODEG00000007803	-	83	63.238	ENSCHIG00000010894	-	66	63.356	Capra_hircus
ENSODEG00000007803	-	92	50.000	ENSCHIG00000012143	-	74	58.790	Capra_hircus
ENSODEG00000007803	-	90	59.397	ENSCHIG00000026149	-	53	59.589	Capra_hircus
ENSODEG00000007803	-	94	62.969	ENSTSYG00000029779	-	96	65.658	Carlito_syrichta
ENSODEG00000007803	-	90	64.769	ENSTSYG00000004355	-	91	65.658	Carlito_syrichta
ENSODEG00000007803	-	90	56.514	ENSTSYG00000036886	-	91	58.349	Carlito_syrichta
ENSODEG00000007803	-	100	63.993	ENSCAPG00000009405	NCL	100	64.884	Cavia_aperea
ENSODEG00000007803	-	90	67.736	ENSCPOG00000001034	NCL	99	68.627	Cavia_porcellus
ENSODEG00000007803	-	85	66.474	ENSCCAG00000000551	-	78	66.857	Cebus_capucinus
ENSODEG00000007803	-	90	65.233	ENSCATG00000037033	NCL	99	64.087	Cercocebus_atys
ENSODEG00000007803	-	100	71.581	ENSCLAG00000013080	NCL	99	72.291	Chinchilla_lanigera
ENSODEG00000007803	-	56	52.968	ENSCHOG00000012860	NCL	78	53.456	Choloepus_hoffmanni
ENSODEG00000007803	-	90	52.632	ENSCGRG00001022350	-	94	52.269	Cricetulus_griseus_chok1gshd
ENSODEG00000007803	-	90	60.823	ENSCGRG00001024315	-	90	61.181	Cricetulus_griseus_chok1gshd
ENSODEG00000007803	-	100	44.684	ENSCGRG00000000507	-	80	49.273	Cricetulus_griseus_crigri
ENSODEG00000007803	-	83	62.095	ENSCGRG00000017894	-	75	61.905	Cricetulus_griseus_crigri
ENSODEG00000007803	-	90	65.071	ENSDNOG00000010783	-	99	64.716	Dasypus_novemcinctus
ENSODEG00000007803	-	90	56.351	ENSDNOG00000046347	-	99	57.065	Dasypus_novemcinctus
ENSODEG00000007803	-	53	53.257	ENSDORG00000023596	-	93	57.678	Dipodomys_ordii
ENSODEG00000007803	-	90	59.783	ENSDORG00000012513	-	91	61.051	Dipodomys_ordii
ENSODEG00000007803	-	83	57.611	ENSETEG00000018937	-	53	59.310	Echinops_telfairi
ENSODEG00000007803	-	56	46.181	ENSETEG00000008553	-	80	47.038	Echinops_telfairi
ENSODEG00000007803	-	67	66.667	ENSETEG00000008139	-	64	66.102	Echinops_telfairi
ENSODEG00000007803	-	98	63.375	ENSEASG00005008488	NCL	100	69.841	Equus_asinus_asinus
ENSODEG00000007803	-	90	64.374	ENSECAG00000021868	NCL	53	62.671	Equus_caballus
ENSODEG00000007803	-	83	62.646	ENSEEUG00000005913	NCL	85	62.183	Erinaceus_europaeus
ENSODEG00000007803	-	90	66.667	ENSFCAG00000027622	NCL	91	67.021	Felis_catus
ENSODEG00000007803	-	90	68.984	ENSFDAG00000014291	NCL	100	69.162	Fukomys_damarensis
ENSODEG00000007803	-	90	64.158	ENSGGOG00000004300	NCL	99	66.129	Gorilla_gorilla
ENSODEG00000007803	-	90	68.750	ENSHGLG00000002031	-	99	69.643	Heterocephalus_glaber_female
ENSODEG00000007803	-	90	60.180	ENSHGLG00000011069	-	91	59.640	Heterocephalus_glaber_female
ENSODEG00000007803	-	90	69.176	ENSHGLG00100014537	-	99	68.996	Heterocephalus_glaber_male
ENSODEG00000007803	-	90	56.466	ENSHGLG00100000745	-	81	78.102	Heterocephalus_glaber_male
ENSODEG00000007803	-	90	56.937	ENSLAFG00000013061	NCL	56	59.659	Loxodonta_africana
ENSODEG00000007803	-	90	67.263	ENSMFAG00000040385	NCL	99	67.384	Macaca_fascicularis
ENSODEG00000007803	-	90	67.263	ENSMMUG00000018094	NCL	99	67.384	Macaca_mulatta
ENSODEG00000007803	-	90	63.978	ENSMNEG00000023839	NCL	58	70.144	Macaca_nemestrina
ENSODEG00000007803	-	90	65.233	ENSMLEG00000028935	NCL	99	64.087	Mandrillus_leucophaeus
ENSODEG00000007803	-	90	54.362	ENSMICG00000029975	-	83	65.926	Microcebus_murinus
ENSODEG00000007803	-	100	62.385	ENSMICG00000002538	-	91	61.649	Microcebus_murinus
ENSODEG00000007803	-	90	57.581	MGP_CAROLIEiJ_G0014362	Ncl	91	58.770	Mus_caroli
ENSODEG00000007803	-	90	58.664	ENSMUSG00000026234	Ncl	91	59.855	Mus_musculus
ENSODEG00000007803	-	90	57.554	MGP_PahariEiJ_G0027599	Ncl	91	58.919	Mus_pahari
ENSODEG00000007803	-	90	59.099	MGP_SPRETEiJ_G0015164	Ncl	91	60.469	Mus_spretus
ENSODEG00000007803	-	90	62.589	ENSMLUG00000014547	NCL	61	67.403	Myotis_lucifugus
ENSODEG00000007803	-	66	61.111	ENSNGAG00000006188	-	54	64.220	Nannospalax_galili
ENSODEG00000007803	-	90	59.612	ENSNGAG00000002454	-	53	57.388	Nannospalax_galili
ENSODEG00000007803	-	84	61.538	ENSNLEG00000014107	-	95	65.506	Nomascus_leucogenys
ENSODEG00000007803	-	60	54.682	ENSOGAG00000027852	NCL	65	54.682	Otolemur_garnettii
ENSODEG00000007803	-	65	79.310	ENSOARG00000013710	-	64	61.644	Ovis_aries
ENSODEG00000007803	-	55	62.857	ENSOARG00000020709	-	56	63.356	Ovis_aries
ENSODEG00000007803	-	90	64.337	ENSPPAG00000011619	NCL	99	65.950	Pan_paniscus
ENSODEG00000007803	-	90	64.476	ENSPPRG00000012603	NCL	91	65.009	Panthera_pardus
ENSODEG00000007803	-	90	64.298	ENSPTIG00000010393	NCL	99	64.831	Panthera_tigris_altaica
ENSODEG00000007803	-	90	66.429	ENSPTRG00000013025	NCL	99	65.474	Pan_troglodytes
ENSODEG00000007803	-	90	67.263	ENSPANG00000010292	NCL	99	67.384	Papio_anubis
ENSODEG00000007803	-	100	64.087	ENSPPYG00000013265	NCL	91	55.894	Pongo_abelii
ENSODEG00000007803	-	90	61.511	ENSPCOG00000004160	-	93	60.791	Propithecus_coquereli
ENSODEG00000007803	-	90	65.536	ENSPCOG00000003051	-	90	65.474	Propithecus_coquereli
ENSODEG00000007803	-	100	63.685	ENSPVAG00000000297	NCL	70	71.111	Pteropus_vampyrus
ENSODEG00000007803	-	90	59.147	ENSRNOG00000018273	Ncl	91	60.391	Rattus_norvegicus
ENSODEG00000007803	-	70	55.513	ENSRBIG00000035396	-	52	55.513	Rhinopithecus_bieti
ENSODEG00000007803	-	90	60.753	ENSRBIG00000037525	-	90	60.682	Rhinopithecus_bieti
ENSODEG00000007803	-	90	66.369	ENSRROG00000028756	-	91	67.025	Rhinopithecus_roxellana
ENSODEG00000007803	-	99	60.759	ENSRROG00000036103	-	98	63.668	Rhinopithecus_roxellana
ENSODEG00000007803	-	67	61.420	ENSSBOG00000027549	-	99	61.420	Saimiri_boliviensis_boliviensis
ENSODEG00000007803	-	90	61.607	ENSSBOG00000029193	-	99	64.087	Saimiri_boliviensis_boliviensis
ENSODEG00000007803	-	62	67.241	ENSSBOG00000023094	-	83	66.092	Saimiri_boliviensis_boliviensis
ENSODEG00000007803	-	90	62.937	ENSSSCG00000016275	NCL	60	73.743	Sus_scrofa
ENSODEG00000007803	-	86	63.391	ENSTBEG00000001546	-	85	64.547	Tupaia_belangeri
ENSODEG00000007803	-	70	68.468	ENSTBEG00000002469	-	66	68.468	Tupaia_belangeri
ENSODEG00000007803	-	90	64.464	ENSTTRG00000009094	NCL	91	66.011	Tursiops_truncatus
ENSODEG00000007803	-	55	62.360	ENSUAMG00000005639	NCL	100	67.687	Ursus_americanus
ENSODEG00000007803	-	90	66.964	ENSUMAG00000015789	NCL	91	67.500	Ursus_maritimus
ENSODEG00000007803	-	68	65.663	ENSVPAG00000001796	NCL	72	66.265	Vicugna_pacos
ENSODEG00000007803	-	50	62.997	ENSVVUG00000025564	NCL	73	70.056	Vulpes_vulpes