EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000007823 (Gene tree)
Gene ID: 101559893
Gene Symbol: PUM2
Alias: -
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 99956 bases
Position: chrJH651534.1:12633020-12732975
Accession: 101559893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000010480	PUF	PF00806.19	3.5e-74	1	8
ENSODEP00000010480	PUF	PF00806.19	3.5e-74	2	8
ENSODEP00000010480	PUF	PF00806.19	3.5e-74	3	8
ENSODEP00000010480	PUF	PF00806.19	3.5e-74	4	8
ENSODEP00000010480	PUF	PF00806.19	3.5e-74	5	8
ENSODEP00000010480	PUF	PF00806.19	3.5e-74	6	8
ENSODEP00000010480	PUF	PF00806.19	3.5e-74	7	8
ENSODEP00000010480	PUF	PF00806.19	3.5e-74	8	8
ENSODEP00000010479	PUF	PF00806.19	3.2e-73	1	8
ENSODEP00000010479	PUF	PF00806.19	3.2e-73	2	8
ENSODEP00000010479	PUF	PF00806.19	3.2e-73	3	8
ENSODEP00000010479	PUF	PF00806.19	3.2e-73	4	8
ENSODEP00000010479	PUF	PF00806.19	3.2e-73	5	8
ENSODEP00000010479	PUF	PF00806.19	3.2e-73	6	8
ENSODEP00000010479	PUF	PF00806.19	3.2e-73	7	8
ENSODEP00000010479	PUF	PF00806.19	3.2e-73	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000010630	PUM2-201	4976	XM_004627466	ENSODEP00000010479	1064 (aa)	XP_004627523	UPI000333CBF6
ENSODET00000010631	PUM2-202	2955	XM_004627471	ENSODEP00000010480	984 (aa)	XP_004627530	-

Gene Model

Click here to download ENSODEG00000007823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000007823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000007823	PUM2	100	88.164	ENSODEG00000003465	PUM1	88	83.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000007823	PUM2	100	97.563	ENSG00000055917	PUM2	100	100.000	Homo_sapiens
ENSODEG00000007823	PUM2	89	90.998	ENSAPOG00000015756	pum2	100	82.218	Acanthochromis_polyacanthus
ENSODEG00000007823	PUM2	100	97.940	ENSAMEG00000002823	PUM2	100	97.940	Ailuropoda_melanoleuca
ENSODEG00000007823	PUM2	90	86.486	ENSACIG00000010646	pum2	98	84.948	Amphilophus_citrinellus
ENSODEG00000007823	PUM2	98	72.643	ENSAOCG00000016619	pum2	87	75.767	Amphiprion_ocellaris
ENSODEG00000007823	PUM2	89	90.998	ENSAPEG00000019924	pum2	100	81.590	Amphiprion_percula
ENSODEG00000007823	PUM2	100	74.492	ENSATEG00000015030	pum2	90	76.753	Anabas_testudineus
ENSODEG00000007823	PUM2	100	91.667	ENSAPLG00000010496	PUM2	90	91.854	Anas_platyrhynchos
ENSODEG00000007823	PUM2	100	90.824	ENSACAG00000010491	PUM2	100	91.199	Anolis_carolinensis
ENSODEG00000007823	PUM2	100	97.285	ENSANAG00000021807	PUM2	100	97.285	Aotus_nancymaae
ENSODEG00000007823	PUM2	100	74.539	ENSACLG00000022532	pum2	89	76.796	Astatotilapia_calliptera
ENSODEG00000007823	PUM2	100	97.657	ENSBTAG00000011155	PUM2	100	97.657	Bos_taurus
ENSODEG00000007823	PUM2	100	97.376	ENSCJAG00000007450	PUM2	100	97.376	Callithrix_jacchus
ENSODEG00000007823	PUM2	100	97.657	ENSCAFG00000003839	PUM2	100	97.657	Canis_familiaris
ENSODEG00000007823	PUM2	100	96.626	ENSCAFG00020025689	PUM2	100	96.626	Canis_lupus_dingo
ENSODEG00000007823	PUM2	100	97.751	ENSCHIG00000022180	PUM2	100	97.751	Capra_hircus
ENSODEG00000007823	PUM2	100	97.749	ENSTSYG00000014463	PUM2	100	97.749	Carlito_syrichta
ENSODEG00000007823	PUM2	100	83.114	ENSCAPG00000016888	PUM2	99	93.487	Cavia_aperea
ENSODEG00000007823	PUM2	100	97.850	ENSCPOG00000031996	PUM2	100	97.850	Cavia_porcellus
ENSODEG00000007823	PUM2	100	97.378	ENSCCAG00000037035	PUM2	100	97.378	Cebus_capucinus
ENSODEG00000007823	PUM2	100	97.378	ENSCATG00000043826	PUM2	100	97.378	Cercocebus_atys
ENSODEG00000007823	PUM2	100	98.596	ENSCLAG00000006048	PUM2	100	98.596	Chinchilla_lanigera
ENSODEG00000007823	PUM2	100	97.378	ENSCSAG00000008087	PUM2	100	97.378	Chlorocebus_sabaeus
ENSODEG00000007823	PUM2	86	99.138	ENSCHOG00000004575	PUM2	86	99.138	Choloepus_hoffmanni
ENSODEG00000007823	PUM2	100	91.194	ENSCPBG00000019966	PUM2	100	91.093	Chrysemys_picta_bellii
ENSODEG00000007823	PUM2	100	97.285	ENSCANG00000032797	PUM2	100	97.285	Colobus_angolensis_palliatus
ENSODEG00000007823	PUM2	100	96.907	ENSCGRG00001025023	Pum2	100	96.907	Cricetulus_griseus_chok1gshd
ENSODEG00000007823	PUM2	100	97.095	ENSCGRG00000001580	Pum2	100	97.095	Cricetulus_griseus_crigri
ENSODEG00000007823	PUM2	97	84.922	ENSCSEG00000020899	pum2	90	75.461	Cynoglossus_semilaevis
ENSODEG00000007823	PUM2	100	73.937	ENSCVAG00000002426	pum2	96	86.404	Cyprinodon_variegatus
ENSODEG00000007823	PUM2	100	74.540	ENSDARG00000061040	pum2	90	78.988	Danio_rerio
ENSODEG00000007823	PUM2	98	95.761	ENSDNOG00000006733	PUM2	100	95.761	Dasypus_novemcinctus
ENSODEG00000007823	PUM2	100	91.540	ENSDORG00000011453	Pum2	100	91.503	Dipodomys_ordii
ENSODEG00000007823	PUM2	91	98.932	ENSETEG00000017683	PUM2	87	99.644	Echinops_telfairi
ENSODEG00000007823	PUM2	96	65.856	ENSEBUG00000004435	pum2	94	81.292	Eptatretus_burgeri
ENSODEG00000007823	PUM2	68	74.468	ENSEBUG00000014828	pum2	83	76.923	Eptatretus_burgeri
ENSODEG00000007823	PUM2	100	97.563	ENSEASG00005009429	PUM2	100	97.563	Equus_asinus_asinus
ENSODEG00000007823	PUM2	100	97.563	ENSECAG00000021930	PUM2	100	97.563	Equus_caballus
ENSODEG00000007823	PUM2	83	87.054	ENSEEUG00000003224	-	80	87.981	Erinaceus_europaeus
ENSODEG00000007823	PUM2	100	72.594	ENSELUG00000014997	pum2	90	74.794	Esox_lucius
ENSODEG00000007823	PUM2	100	97.470	ENSFCAG00000027520	PUM2	100	97.470	Felis_catus
ENSODEG00000007823	PUM2	100	92.416	ENSFALG00000001759	PUM2	100	92.603	Ficedula_albicollis
ENSODEG00000007823	PUM2	100	96.825	ENSFDAG00000019685	PUM2	100	96.825	Fukomys_damarensis
ENSODEG00000007823	PUM2	91	91.241	ENSFHEG00000021596	pum2	100	76.400	Fundulus_heteroclitus
ENSODEG00000007823	PUM2	100	71.324	ENSGMOG00000006903	pum2	100	73.877	Gadus_morhua
ENSODEG00000007823	PUM2	100	92.135	ENSGALG00000016481	PUM2	100	92.322	Gallus_gallus
ENSODEG00000007823	PUM2	91	91.262	ENSGAFG00000013691	pum2	100	76.072	Gambusia_affinis
ENSODEG00000007823	PUM2	100	73.913	ENSGACG00000009670	pum2	100	74.862	Gasterosteus_aculeatus
ENSODEG00000007823	PUM2	100	91.760	ENSGAGG00000020698	PUM2	100	91.667	Gopherus_agassizii
ENSODEG00000007823	PUM2	100	97.566	ENSGGOG00000011374	PUM2	100	97.566	Gorilla_gorilla
ENSODEG00000007823	PUM2	95	86.076	ENSHBUG00000016453	pum2	90	70.720	Haplochromis_burtoni
ENSODEG00000007823	PUM2	100	95.595	ENSHGLG00000007892	PUM2	100	95.689	Heterocephalus_glaber_female
ENSODEG00000007823	PUM2	100	95.318	ENSHGLG00100015510	PUM2	100	95.412	Heterocephalus_glaber_male
ENSODEG00000007823	PUM2	99	91.687	ENSHCOG00000010119	pum2	89	80.404	Hippocampus_comes
ENSODEG00000007823	PUM2	100	98.030	ENSSTOG00000006262	PUM2	100	98.030	Ictidomys_tridecemlineatus
ENSODEG00000007823	PUM2	100	97.474	ENSJJAG00000020969	Pum2	100	97.474	Jaculus_jaculus
ENSODEG00000007823	PUM2	100	72.903	ENSKMAG00000017216	pum2	100	71.116	Kryptolebias_marmoratus
ENSODEG00000007823	PUM2	96	91.241	ENSLBEG00000020488	pum2	90	76.433	Labrus_bergylta
ENSODEG00000007823	PUM2	100	88.899	ENSLACG00000008723	PUM2	89	89.366	Latimeria_chalumnae
ENSODEG00000007823	PUM2	100	85.421	ENSLOCG00000017196	pum2	89	85.701	Lepisosteus_oculatus
ENSODEG00000007823	PUM2	100	96.822	ENSLAFG00000009278	PUM2	100	96.822	Loxodonta_africana
ENSODEG00000007823	PUM2	100	97.285	ENSMFAG00000000492	PUM2	100	97.285	Macaca_fascicularis
ENSODEG00000007823	PUM2	100	97.285	ENSMMUG00000023181	PUM2	100	97.285	Macaca_mulatta
ENSODEG00000007823	PUM2	100	97.285	ENSMNEG00000039659	PUM2	100	97.285	Macaca_nemestrina
ENSODEG00000007823	PUM2	100	97.378	ENSMLEG00000039243	PUM2	100	97.378	Mandrillus_leucophaeus
ENSODEG00000007823	PUM2	100	74.884	ENSMAMG00000006121	pum2	90	77.058	Mastacembelus_armatus
ENSODEG00000007823	PUM2	100	74.354	ENSMZEG00005000791	pum2	89	76.611	Maylandia_zebra
ENSODEG00000007823	PUM2	100	92.135	ENSMGAG00000014040	PUM2	100	92.322	Meleagris_gallopavo
ENSODEG00000007823	PUM2	100	97.376	ENSMAUG00000000311	Pum2	100	97.376	Mesocricetus_auratus
ENSODEG00000007823	PUM2	100	98.034	ENSMICG00000011647	PUM2	100	98.034	Microcebus_murinus
ENSODEG00000007823	PUM2	100	97.559	ENSMOCG00000013663	Pum2	100	97.559	Microtus_ochrogaster
ENSODEG00000007823	PUM2	100	73.035	ENSMMOG00000002975	pum2	100	75.458	Mola_mola
ENSODEG00000007823	PUM2	100	90.233	ENSMODG00000009811	PUM2	100	90.512	Monodelphis_domestica
ENSODEG00000007823	PUM2	91	90.754	ENSMALG00000022313	pum2	100	74.875	Monopterus_albus
ENSODEG00000007823	PUM2	100	97.186	MGP_CAROLIEiJ_G0017603	Pum2	100	97.186	Mus_caroli
ENSODEG00000007823	PUM2	100	97.280	ENSMUSG00000020594	Pum2	100	97.280	Mus_musculus
ENSODEG00000007823	PUM2	100	97.376	MGP_PahariEiJ_G0029361	Pum2	100	97.376	Mus_pahari
ENSODEG00000007823	PUM2	100	97.280	MGP_SPRETEiJ_G0018447	Pum2	100	97.280	Mus_spretus
ENSODEG00000007823	PUM2	100	97.844	ENSMPUG00000013734	PUM2	100	97.844	Mustela_putorius_furo
ENSODEG00000007823	PUM2	100	97.004	ENSMLUG00000007362	PUM2	100	97.004	Myotis_lucifugus
ENSODEG00000007823	PUM2	99	66.170	ENSNGAG00000016239	-	67	74.596	Nannospalax_galili
ENSODEG00000007823	PUM2	100	97.465	ENSNGAG00000016665	-	100	97.465	Nannospalax_galili
ENSODEG00000007823	PUM2	100	65.968	ENSNBRG00000020737	pum2	100	66.766	Neolamprologus_brichardi
ENSODEG00000007823	PUM2	100	97.378	ENSNLEG00000002509	PUM2	99	99.270	Nomascus_leucogenys
ENSODEG00000007823	PUM2	93	90.251	ENSMEUG00000016567	PUM2	93	89.415	Notamacropus_eugenii
ENSODEG00000007823	PUM2	75	88.571	ENSOPRG00000001963	PUM2	100	76.678	Ochotona_princeps
ENSODEG00000007823	PUM2	100	74.446	ENSONIG00000006119	pum2	90	76.703	Oreochromis_niloticus
ENSODEG00000007823	PUM2	100	97.472	ENSOCUG00000017908	PUM2	100	97.472	Oryctolagus_cuniculus
ENSODEG00000007823	PUM2	90	90.732	ENSORLG00000012611	pum2	100	75.025	Oryzias_latipes
ENSODEG00000007823	PUM2	91	90.732	ENSORLG00020014452	pum2	100	74.925	Oryzias_latipes_hni
ENSODEG00000007823	PUM2	100	73.567	ENSORLG00015009427	pum2	90	74.792	Oryzias_latipes_hsok
ENSODEG00000007823	PUM2	95	83.264	ENSOMEG00000005889	pum2	100	74.657	Oryzias_melastigma
ENSODEG00000007823	PUM2	98	97.040	ENSOGAG00000002187	PUM2	100	97.040	Otolemur_garnettii
ENSODEG00000007823	PUM2	100	97.568	ENSOARG00000017236	PUM2	100	97.568	Ovis_aries
ENSODEG00000007823	PUM2	100	97.566	ENSPPAG00000023095	PUM2	100	97.566	Pan_paniscus
ENSODEG00000007823	PUM2	100	97.470	ENSPPRG00000021443	PUM2	100	97.470	Panthera_pardus
ENSODEG00000007823	PUM2	100	97.470	ENSPTIG00000018982	PUM2	100	97.470	Panthera_tigris_altaica
ENSODEG00000007823	PUM2	100	97.566	ENSPTRG00000011692	PUM2	100	97.566	Pan_troglodytes
ENSODEG00000007823	PUM2	100	86.196	ENSPANG00000009393	PUM2	100	100.000	Papio_anubis
ENSODEG00000007823	PUM2	100	74.524	ENSPKIG00000023195	pum2	99	83.252	Paramormyrops_kingsleyae
ENSODEG00000007823	PUM2	100	91.948	ENSPSIG00000011626	PUM2	88	92.135	Pelodiscus_sinensis
ENSODEG00000007823	PUM2	91	90.511	ENSPMGG00000016123	pum2	100	75.325	Periophthalmus_magnuspinnatus
ENSODEG00000007823	PUM2	100	96.907	ENSPEMG00000008357	Pum2	100	96.907	Peromyscus_maniculatus_bairdii
ENSODEG00000007823	PUM2	100	68.140	ENSPMAG00000007038	pum2	99	66.881	Petromyzon_marinus
ENSODEG00000007823	PUM2	100	89.508	ENSPCIG00000022139	PUM2	100	89.601	Phascolarctos_cinereus
ENSODEG00000007823	PUM2	100	72.423	ENSPFOG00000019208	pum2	90	74.752	Poecilia_formosa
ENSODEG00000007823	PUM2	100	75.300	ENSPLAG00000001826	pum2	100	76.271	Poecilia_latipinna
ENSODEG00000007823	PUM2	100	74.030	ENSPMEG00000015766	pum2	90	76.406	Poecilia_mexicana
ENSODEG00000007823	PUM2	91	91.019	ENSPREG00000006905	pum2	100	76.096	Poecilia_reticulata
ENSODEG00000007823	PUM2	100	97.566	ENSPPYG00000012617	PUM2	100	97.566	Pongo_abelii
ENSODEG00000007823	PUM2	76	100.000	ENSPCAG00000008001	PUM2	70	100.000	Procavia_capensis
ENSODEG00000007823	PUM2	99	98.102	ENSPCOG00000019636	PUM2	100	98.102	Propithecus_coquereli
ENSODEG00000007823	PUM2	98	94.928	ENSPVAG00000002920	PUM2	100	92.190	Pteropus_vampyrus
ENSODEG00000007823	PUM2	100	74.539	ENSPNYG00000022901	pum2	89	76.796	Pundamilia_nyererei
ENSODEG00000007823	PUM2	98	75.000	ENSPNAG00000008025	pum2	100	74.948	Pygocentrus_nattereri
ENSODEG00000007823	PUM2	100	96.859	ENSRNOG00000006180	Pum2	100	96.859	Rattus_norvegicus
ENSODEG00000007823	PUM2	100	97.285	ENSRBIG00000044880	PUM2	100	97.285	Rhinopithecus_bieti
ENSODEG00000007823	PUM2	100	97.287	ENSSBOG00000022007	PUM2	100	97.287	Saimiri_boliviensis_boliviensis
ENSODEG00000007823	PUM2	100	88.684	ENSSHAG00000002778	PUM2	100	88.500	Sarcophilus_harrisii
ENSODEG00000007823	PUM2	87	87.202	ENSSFOG00015003476	pum2	84	87.636	Scleropages_formosus
ENSODEG00000007823	PUM2	100	73.247	ENSSMAG00000018236	pum2	100	66.881	Scophthalmus_maximus
ENSODEG00000007823	PUM2	89	74.380	ENSSDUG00000001800	pum2	87	77.137	Seriola_dumerili
ENSODEG00000007823	PUM2	100	73.801	ENSSLDG00000000981	pum2	90	76.541	Seriola_lalandi_dorsalis
ENSODEG00000007823	PUM2	96	89.624	ENSSARG00000010992	PUM2	86	89.510	Sorex_araneus
ENSODEG00000007823	PUM2	99	92.439	ENSSPUG00000017012	PUM2	99	91.777	Sphenodon_punctatus
ENSODEG00000007823	PUM2	89	90.998	ENSSPAG00000022948	pum2	100	76.594	Stegastes_partitus
ENSODEG00000007823	PUM2	100	97.840	ENSSSCG00000008600	PUM2	100	97.840	Sus_scrofa
ENSODEG00000007823	PUM2	100	92.416	ENSTGUG00000013149	PUM2	100	92.603	Taeniopygia_guttata
ENSODEG00000007823	PUM2	100	71.996	ENSTRUG00000018167	pum2	90	72.426	Takifugu_rubripes
ENSODEG00000007823	PUM2	100	73.684	ENSTNIG00000003116	pum2	90	75.853	Tetraodon_nigroviridis
ENSODEG00000007823	PUM2	86	99.390	ENSTBEG00000008729	PUM2	86	99.390	Tupaia_belangeri
ENSODEG00000007823	PUM2	100	97.563	ENSTTRG00000004887	PUM2	100	97.563	Tursiops_truncatus
ENSODEG00000007823	PUM2	72	97.801	ENSUAMG00000008120	PUM2	98	97.801	Ursus_americanus
ENSODEG00000007823	PUM2	100	97.844	ENSUMAG00000023198	PUM2	100	97.844	Ursus_maritimus
ENSODEG00000007823	PUM2	100	97.749	ENSVPAG00000005056	PUM2	100	97.749	Vicugna_pacos
ENSODEG00000007823	PUM2	100	97.751	ENSVVUG00000014829	PUM2	100	97.751	Vulpes_vulpes
ENSODEG00000007823	PUM2	100	80.261	ENSXETG00000008903	pum2	90	80.912	Xenopus_tropicalis
ENSODEG00000007823	PUM2	89	74.120	ENSXCOG00000002556	pum2	87	76.780	Xiphophorus_couchianus
ENSODEG00000007823	PUM2	100	75.400	ENSXMAG00000017682	pum2	100	76.371	Xiphophorus_maculatus